; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004018 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004018
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1597:562843..563220
RNA-Seq ExpressionMS004018
SyntenyMS004018
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0010082 - regulation of root meristem growth (biological process)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR038804 - Root meristem growth factor 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ98963.1 hypothetical protein E5676_scaffold248G001660 [Cucumis melo var. makuwa]1.6e-0838.4Show/hide
Query:  VFFKLSFVMWAGGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEAS
        + F  +FV   GG +A GR+YP        ++  + + K M  E +R  + +G   S ST  S+ NL  +K  ++ + K K ++K   +   H  + + S
Subjt:  VFFKLSFVMWAGGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEAS

Query:  SFVTFNADYFVAKPHPPKNNGGKCL
         F+ FNADYFVAKPHPPKNNGGK L
Subjt:  SFVTFNADYFVAKPHPPKNNGGKCL

XP_022137288.1 uncharacterized protein LOC111008786 [Momordica charantia]1.9e-59100Show/hide
Query:  GGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEASSFVTFNADYFV
        GGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEASSFVTFNADYFV
Subjt:  GGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEASSFVTFNADYFV

Query:  AKPHPPKNNGGKCL
        AKPHPPKNNGGKCL
Subjt:  AKPHPPKNNGGKCL

XP_031736121.1 uncharacterized protein LOC116401758 [Cucumis sativus]3.2e-1444.26Show/hide
Query:  VFFKLSFVMWAGGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEAS
        +FF  +FV+  GG +A GR+YP     +G E Q + ++KM   E +R  +++G   S ST+ S+ NL   K     + K K I+KRD +   H L+ E S
Subjt:  VFFKLSFVMWAGGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEAS

Query:  SFVTFNADYFVAKPHPPKNNGG
         F+ +NADYFVAKPHPPKNNGG
Subjt:  SFVTFNADYFVAKPHPPKNNGG

XP_040366475.1 uncharacterized protein LOC121050479 [Rosa chinensis]5.2e-0438.46Show/hide
Query:  RKMMGKEDLRRVKEEGHHFSG-----STSISNGNLNPRKNAENWSAKPKLIS--KRDYNLNQHPLDVE-ASSFVTFNADYFVAKPHPPKNN
        RKMM K  L  VKEE  + +G     S + S+G+ +P KN+ N + +P+ +    R +   +  + V+ A +F+  NADY V +PHPPKNN
Subjt:  RKMMGKEDLRRVKEEGHHFSG-----STSISNGNLNPRKNAENWSAKPKLIS--KRDYNLNQHPLDVE-ASSFVTFNADYFVAKPHPPKNN

TrEMBL top hitse value%identityAlignment
A0A068TT52 Uncharacterized protein9.5e-0434.62Show/hide
Query:  KEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEASSFVTFNADYFVAKPHPPKNN
        +E+ ++  EE    SG++S+ N       +   W  K  + SK       H L V    F+ FNADY +AK HPP+NN
Subjt:  KEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEASSFVTFNADYFVAKPHPPKNN

A0A0A0LVN9 Uncharacterized protein1.6e-1444.26Show/hide
Query:  VFFKLSFVMWAGGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEAS
        +FF  +FV+  GG +A GR+YP     +G E Q + ++KM   E +R  +++G   S ST+ S+ NL   K     + K K I+KRD +   H L+ E S
Subjt:  VFFKLSFVMWAGGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEAS

Query:  SFVTFNADYFVAKPHPPKNNGG
         F+ +NADYFVAKPHPPKNNGG
Subjt:  SFVTFNADYFVAKPHPPKNNGG

A0A5D3BI53 Uncharacterized protein7.5e-0938.4Show/hide
Query:  VFFKLSFVMWAGGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEAS
        + F  +FV   GG +A GR+YP        ++  + + K M  E +R  + +G   S ST  S+ NL  +K  ++ + K K ++K   +   H  + + S
Subjt:  VFFKLSFVMWAGGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEAS

Query:  SFVTFNADYFVAKPHPPKNNGGKCL
         F+ FNADYFVAKPHPPKNNGGK L
Subjt:  SFVTFNADYFVAKPHPPKNNGGKCL

A0A6J1C9X6 uncharacterized protein LOC1110087869.4e-60100Show/hide
Query:  GGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEASSFVTFNADYFV
        GGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEASSFVTFNADYFV
Subjt:  GGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEASSFVTFNADYFV

Query:  AKPHPPKNNGGKCL
        AKPHPPKNNGGKCL
Subjt:  AKPHPPKNNGGKCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATGTGTTTTTTAAGTTAAGTTTCGTTATGTGGGCAGGTGGGATTATTGCATATGGAAGAAATTATCCCTTTCCAATGTCTCGGGTTGGAAGTGAAAAACAAAGAGAATC
AGTGAGAAAGATGATGGGTAAAGAAGATTTGAGAAGGGTAAAAGAGGAAGGTCACCATTTTTCTGGGAGCACATCTATTTCCAATGGTAATTTGAATCCAAGGAAGAATG
CAGAGAATTGGAGTGCAAAACCAAAGCTGATTAGCAAAAGAGATTACAACCTGAACCAGCATCCATTGGACGTTGAAGCTTCTAGTTTTGTGACTTTTAATGCGGACTAT
TTTGTCGCCAAACCACATCCTCCAAAGAACAATGGAGGGAAGTGTCTC
mRNA sequenceShow/hide mRNA sequence
CATGTGTTTTTTAAGTTAAGTTTCGTTATGTGGGCAGGTGGGATTATTGCATATGGAAGAAATTATCCCTTTCCAATGTCTCGGGTTGGAAGTGAAAAACAAAGAGAATC
AGTGAGAAAGATGATGGGTAAAGAAGATTTGAGAAGGGTAAAAGAGGAAGGTCACCATTTTTCTGGGAGCACATCTATTTCCAATGGTAATTTGAATCCAAGGAAGAATG
CAGAGAATTGGAGTGCAAAACCAAAGCTGATTAGCAAAAGAGATTACAACCTGAACCAGCATCCATTGGACGTTGAAGCTTCTAGTTTTGTGACTTTTAATGCGGACTAT
TTTGTCGCCAAACCACATCCTCCAAAGAACAATGGAGGGAAGTGTCTC
Protein sequenceShow/hide protein sequence
HVFFKLSFVMWAGGIIAYGRNYPFPMSRVGSEKQRESVRKMMGKEDLRRVKEEGHHFSGSTSISNGNLNPRKNAENWSAKPKLISKRDYNLNQHPLDVEASSFVTFNADY
FVAKPHPPKNNGGKCL