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MS004028 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004028
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1597:623038..623448
RNA-Seq ExpressionMS004028
SyntenyMS004028
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8673967.1 hypothetical protein F3Y22_tig00111769pilonHSYRG00194 [Hibiscus syriacus]2.2e-0841.67Show/hide
Query:  IEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSLTAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNAKCTWPRREPK
        +EIG  +   F S +  S  E +P+F PLQ ++  GSS SL  F  P+   SHS AI T P+  SF   L+ +A+S    G  LG  W  + T P R PK
Subjt:  IEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSLTAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNAKCTWPRREPK

Query:  RVPMTRGP
        RV +TR P
Subjt:  RVPMTRGP

KAF8697035.1 hypothetical protein HU200_036686 [Digitaria exilis]6.4e-0839.52Show/hide
Query:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSL------TAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNA
        TPAPI+  S+A     S AP S   A P   PLQ    T SS+S           + +   SHS+A+RT P+AIS T   +G ASS+ +AG   GS WNA
Subjt:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSL------TAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNA

Query:  KCTWPRREPKRVPMTRGPRPRERF
                   VP++R PRP  R+
Subjt:  KCTWPRREPKRVPMTRGPRPRERF

KAF8726779.1 hypothetical protein HU200_019254 [Digitaria exilis]4.2e-0737.58Show/hide
Query:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSL--TAFFSPSFSL------------SHSNAIRTNPDAISFTKPLIGVASSTKKAGS
        TPAP++ GS A     S AP S   A P   PLQ    T SS+S        P+ ++            SHS+A+RT P+AIS T   +G ASS+  AG 
Subjt:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSL--TAFFSPSFSL------------SHSNAIRTNPDAISFTKPLIGVASSTKKAGS

Query:  ELGSLWNAKCTWPRREPKRVPMTRGPRPRERFDRFLPNTVRTERNRATA
          GS WNA           VP++R PRP  R  R        ER R TA
Subjt:  ELGSLWNAKCTWPRREPKRVPMTRGPRPRERFDRFLPNTVRTERNRATA

KAG0538653.1 hypothetical protein BDA96_03G255000 [Sorghum bicolor]5.4e-0738.71Show/hide
Query:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSL----------TAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGS
        TPAPI+ GS+A     S AP S   A P   PLQ      SS+S            A  +   + SHS+A+RT P+AIS T   +G ASS+  AG   GS
Subjt:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSL----------TAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGS

Query:  LWNAKCTWPRREPKRVPMTRGPRP
         WNA           VP++R P P
Subjt:  LWNAKCTWPRREPKRVPMTRGPRP

KAG6542517.1 hypothetical protein Mapa_015987 [Marchantia paleacea]9.9e-0942.2Show/hide
Query:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSLTAFFSPSFSL------SHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNA
        TPAP+      LRIF S++  S L A P F PLQN LQTGS            SL      SHS+AI + P+ IS T+  +G+A+S++ +G  L S W  
Subjt:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSLTAFFSPSFSL------SHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNA

Query:  KCTWPRREP
        K T P R+P
Subjt:  KCTWPRREP

TrEMBL top hitse value%identityAlignment
A0A0A9K4X2 Uncharacterized protein7.2e-1344.07Show/hide
Query:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSLTAFFSP---------------SFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAG
        TPAP++ GS+A     S AP S   A P   PLQ    T SSSS      P                 + SHS+A+RT P+AIS T   +G ASS+  AG
Subjt:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSLTAFFSP---------------SFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAG

Query:  SELGSLWNAKCTWPRREP
         E GS WNA+CTWPRR P
Subjt:  SELGSLWNAKCTWPRREP

A0A1W0VYM4 Uncharacterized protein2.6e-0738.71Show/hide
Query:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSL----------TAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGS
        TPAPI+ GS+A     S AP S   A P   PLQ      SS+S            A  +   + SHS+A+RT P+AIS T   +G ASS+  AG   GS
Subjt:  TPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSL----------TAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGS

Query:  LWNAKCTWPRREPKRVPMTRGPRP
         WNA           VP++R P P
Subjt:  LWNAKCTWPRREPKRVPMTRGPRP

A0A6A2YFV7 Uncharacterized protein1.1e-0841.67Show/hide
Query:  IEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSLTAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNAKCTWPRREPK
        +EIG  +   F S +  S  E +P+F PLQ ++  GSS SL  F  P+   SHS AI T P+  SF   L+ +A+S    G  LG  W  + T P R PK
Subjt:  IEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSLTAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNAKCTWPRREPK

Query:  RVPMTRGP
        RV +TR P
Subjt:  RVPMTRGP

A0A7C8YZ86 Uncharacterized protein2.2e-1752.25Show/hide
Query:  IEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSLTAFF------SPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNAKCTW
        +++G T LR   S  PQSFL A P F PLQ  LQ GSS S   FF           LSHSNA  T+PDAIS T+ L+GV SS +KAG+E+ + WNA  TW
Subjt:  IEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSLTAFF------SPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNAKCTW

Query:  PRREPKRVPMT
        PRR P +VP T
Subjt:  PRREPKRVPMT

A0A7J7D413 Uncharacterized protein2.2e-0637.84Show/hide
Query:  RTPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGS-SSSLTAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNAKCTW
        RTPAP +    + +   S      L A P F PLQ + QTG+ +       S S  LSHS A+R  P  IS  +  +G A+S ++ G    S W  K T 
Subjt:  RTPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGS-SSSLTAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNAKCTW

Query:  PRREPKRVPMT
        P R+PK+VP+T
Subjt:  PRREPKRVPMT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAACACCTGCACCCATCGAAATTGGCTCCACAGCCTTGAGGATTTTCATCTCTTTGGCCCCACAATCCTTCCTCGAAGCAAAACCACTCTTCTTCCCATTGCAAAATGT
CCTCCAGACAGGCTCTTCTAGTAGTCTCACTGCTTTCTTTTCCCCTTCTTTCTCTTTATCACATTCCAATGCAATTCGGACCAACCCAGACGCCATTTCTTTTACTAAAC
CACTAATAGGCGTCGCCAGCTCTACCAAAAAGGCAGGTTCGGAGTTGGGGTCTCTTTGGAATGCAAAGTGCACATGGCCACGCCGAGAACCGAAAAGGGTTCCGATGACC
CGAGGCCCCAGACCCAGAGAAAGGTTCGACCGATTTTTGCCAAACACTGTGAGAACCGAACGCAACCGTGCAACCGCAACG
mRNA sequenceShow/hide mRNA sequence
AGAACACCTGCACCCATCGAAATTGGCTCCACAGCCTTGAGGATTTTCATCTCTTTGGCCCCACAATCCTTCCTCGAAGCAAAACCACTCTTCTTCCCATTGCAAAATGT
CCTCCAGACAGGCTCTTCTAGTAGTCTCACTGCTTTCTTTTCCCCTTCTTTCTCTTTATCACATTCCAATGCAATTCGGACCAACCCAGACGCCATTTCTTTTACTAAAC
CACTAATAGGCGTCGCCAGCTCTACCAAAAAGGCAGGTTCGGAGTTGGGGTCTCTTTGGAATGCAAAGTGCACATGGCCACGCCGAGAACCGAAAAGGGTTCCGATGACC
CGAGGCCCCAGACCCAGAGAAAGGTTCGACCGATTTTTGCCAAACACTGTGAGAACCGAACGCAACCGTGCAACCGCAACG
Protein sequenceShow/hide protein sequence
RTPAPIEIGSTALRIFISLAPQSFLEAKPLFFPLQNVLQTGSSSSLTAFFSPSFSLSHSNAIRTNPDAISFTKPLIGVASSTKKAGSELGSLWNAKCTWPRREPKRVPMT
RGPRPRERFDRFLPNTVRTERNRATAT