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MS004030 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004030
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1597:634484..634600
RNA-Seq ExpressionMS004030
SyntenyMS004030
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043170.1 uncharacterized protein E6C27_scaffold110G00340 [Cucumis melo var. makuwa]1.1e-0569.23Show/hide
Query:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
        +VVVFFPTGPNSDHV FLVVS +GSGL V +D ++ +FS
Subjt:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
XP_008459007.1 PREDICTED: uncharacterized protein LOC103498249 [Cucumis melo]1.1e-0569.23Show/hide
Query:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
        +VVVFFPTGPNSDHV FLVVS +GSGL V +D ++ +FS
Subjt:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
XP_022147194.1 uncharacterized protein LOC111016204 [Momordica charantia]1.1e-0884.21Show/hide
Query:  VVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
        VVVFFPTGPNSDHV FLVVSG GSGL V ADYND++FS
Subjt:  VVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
XP_031738950.1 uncharacterized protein LOC101205590 [Cucumis sativus]1.1e-0569.23Show/hide
Query:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
        +VVVFFPTGPNSDHV FLVVS +GSGL V +D ++ +FS
Subjt:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
XP_038894321.1 uncharacterized protein LOC120082953 [Benincasa hispida]1.0e-0671.79Show/hide
Query:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
        +VVVFFPTGPNSDHV FLVVSG+ SGL V +DY++ +FS
Subjt:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
TrEMBL top hitse value%identityAlignment
A0A0A0M158 Uncharacterized protein5.4e-0669.23Show/hide
Query:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
        +VVVFFPTGPNSDHV FLVVS +GSGL V +D ++ +FS
Subjt:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
A0A1S3C9R8 uncharacterized protein LOC1034982495.4e-0669.23Show/hide
Query:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
        +VVVFFPTGPNSDHV FLVVS +GSGL V +D ++ +FS
Subjt:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
A0A5A7TIM1 Uncharacterized protein5.4e-0669.23Show/hide
Query:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
        +VVVFFPTGPNSDHV FLVVS +GSGL V +D ++ +FS
Subjt:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
A0A6J1D0A6 uncharacterized protein LOC1110162045.2e-0984.21Show/hide
Query:  VVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
        VVVFFPTGPNSDHV FLVVSG GSGL V ADYND++FS
Subjt:  VVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
A0A6J1L0V7 uncharacterized protein LOC1114980921.2e-0566.67Show/hide
Query:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
        ++VVFFPTGPNSDHV FLVVSG+ SGL V +D ++ +FS
Subjt:  NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACGTCGTTGTGTTTTTTCCCACGGGACCCAACTCCGACCATGTCGAGTTTCTGGTGGTTTCCGGCGATGGTTCTGGTTTGGGCGTTGATGCCGATTACAATGACAAGAT
TTTTAGT
mRNA sequenceShow/hide mRNA sequence
AACGTCGTTGTGTTTTTTCCCACGGGACCCAACTCCGACCATGTCGAGTTTCTGGTGGTTTCCGGCGATGGTTCTGGTTTGGGCGTTGATGCCGATTACAATGACAAGAT
TTTTAGT
Protein sequenceShow/hide protein sequence
NVVVFFPTGPNSDHVEFLVVSGDGSGLGVDADYNDKIFS