; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004041 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004041
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor TCP18-like isoform X2
Genome locationscaffold1597:696931..697944
RNA-Seq ExpressionMS004041
SyntenyMS004041
Gene Ontology termsGO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup
IPR017888 - CYC/TB1, R domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011650456.1 transcription factor TCP18 [Cucumis sativus]3.2e-5649.86Show/hide
Query:  MFFSTNSCAKNGHELQHDPF--LKH---QDLHLPISFFPFPSPFEVDELFHEDHLFLQQPHKIPLPHNN--PEIINNSNSTA--PMAM-ISNSDE--QKK
        MFFSTNS     +   HDPF  L H      HLPISFFPFPSPFEVD+   + +     P      +NN  P II+  NS     M+M + NSD+  +K 
Subjt:  MFFSTNSCAKNGHELQHDPF--LKH---QDLHLPISFFPFPSPFEVDELFHEDHLFLQQPHKIPLPHNN--PEIINNSNSTA--PMAM-ISNSDE--QKK

Query:  IKKAP-RKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEH--
        +KK P RKRL KKDRHSKI TA+G RDRRMRLSLPVA+QFFGLQDMLGVDKGSKTVEWLL+QA+PEILKLA E+      ++  + S  S++SE+D    
Subjt:  IKKAP-RKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEH--

Query:  -----EHENEKKLVVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHD--PKINTSSC----FET--GEE
             ++ N K   +K  K   K+ K  R K+  IRK MAKE+R+KARERARART+EK +     RD +  SD DH      IN+SS     FET  GEE
Subjt:  -----EHENEKKLVVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHD--PKINTSSC----FET--GEE

Query:  S-GATTQISYNFNPPAMEVEDHHQPMSSQFGSDYQNSLE----IMGNWSPS-ASTFNFLHQ
        S G TT  SYN N         + P++SQF S +         I+  WSPS  STFNFLHQ
Subjt:  S-GATTQISYNFNPPAMEVEDHHQPMSSQFGSDYQNSLE----IMGNWSPS-ASTFNFLHQ

XP_022137641.1 uncharacterized protein LOC111009036 [Momordica charantia]3.6e-6899.28Show/hide
Query:  MKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKINTSSCFETGEESGATTQISYNFNPPAMEVEDHHQPM
        MKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKINTSSCFETGEESGATTQISYNFNPPAMEVEDHHQPM
Subjt:  MKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKINTSSCFETGEESGATTQISYNFNPPAMEVEDHHQPM

Query:  SSQFGSDYQNSLEIMGNWSPSASTFNFLHQTSTLDLQVQ
        SSQFGSDYQNSLEIMGNWSPS STFNFLHQTSTLDLQVQ
Subjt:  SSQFGSDYQNSLEIMGNWSPSASTFNFLHQTSTLDLQVQ

XP_023520103.1 transcription factor TCP18-like isoform X1 [Cucurbita pepo subsp. pepo]3.5e-5551.91Show/hide
Query:  MFFSTNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHED-HLFLQQPHK---IPLPHNNPEIINNSNSTAPMAMISNSDEQKKIKKAPRKR
        MFFST +   + H+  HD        HLPISFFPFPSPFEVDE + +  H F   P K   IP P N   I+ ++        I NSD++K   K PRKR
Subjt:  MFFSTNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHED-HLFLQQPHK---IPLPHNNPEIINNSNSTAPMAMISNSDEQKKIKKAPRKR

Query:  LCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEHENEKKL---
        L KKDRHSKI TARG RDRRMRLSLPVARQFFGLQD+LGVDKGSKTVEWLL QA PEILKLAK+RN S  ++     +VCS+++  +        ++   
Subjt:  LCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEHENEKKL---

Query:  --VVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKIN-TSSC-----FET-GEESGATTQISYNFN
            KKM S    +K+ R K+P  RKPM KE+R+KARERARART+EK    QI +D S     DHH P  N  SSC     FET GEESG T   SYNFN
Subjt:  --VVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKIN-TSSC-----FET-GEESGATTQISYNFN

Query:  PPAMEVEDHHQPMSSQFGSDYQNSLEIMGNWSPSASTFNFL
         P+MEVE+               S EIM  WSPS S+ NFL
Subjt:  PPAMEVEDHHQPMSSQFGSDYQNSLEIMGNWSPSASTFNFL

XP_023520104.1 transcription factor TCP18-like isoform X2 [Cucurbita pepo subsp. pepo]1.6e-5551Show/hide
Query:  MFFSTNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHED-HLFLQQPHK---IPLPHNNPEIINNSNSTAPMAMISNSDEQKKIKKAPRKR
        MFFST +   + H+  HD        HLPISFFPFPSPFEVDE + +  H F   P K   IP P N   I+ ++        I NSD++K   K PRKR
Subjt:  MFFSTNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHED-HLFLQQPHK---IPLPHNNPEIINNSNSTAPMAMISNSDEQKKIKKAPRKR

Query:  LCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEHENEKKL---
        L KKDRHSKI TARG RDRRMRLSLPVARQFFGLQD+LGVDKGSKTVEWLL QA PEILKLAK+RN S  ++     +VCS+++  +        ++   
Subjt:  LCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEHENEKKL---

Query:  --VVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKIN-TSSC-----FET-GEESGATTQISYNFN
            KKM S    +K+ R K+P  RKPM KE+R+KARERARART+EK    QI +D S     DHH P  N  SSC     FET GEESG T   SYNFN
Subjt:  --VVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKIN-TSSC-----FET-GEESGATTQISYNFN

Query:  PPAMEVEDHHQPMSSQFGSDYQNSLEIMGNWSPSASTFNFLHQTSTLDLQV
         P+MEVE+               S EIM  WSPS S+ NFL      D Q+
Subjt:  PPAMEVEDHHQPMSSQFGSDYQNSLEIMGNWSPSASTFNFLHQTSTLDLQV

XP_038895175.1 transcription factor TCP18-like [Benincasa hispida]1.7e-5449.86Show/hide
Query:  MFFSTNSCA--KNGHELQHDPF--LKHQD--LHLPISFFPFPSPFEV-----DELFHEDHLFLQQPHKIPLPHNNPEIINNSNSTAPM-AMISNSDEQKK
        MFFSTNS +  KNG    HDPF  L H D   HLPISFFPFPSPFEV     D   H+D L           + NP II+ +N+T  +  ++     QKK
Subjt:  MFFSTNSCA--KNGHELQHDPF--LKHQD--LHLPISFFPFPSPFEV-----DELFHEDHLFLQQPHKIPLPHNNPEIINNSNSTAPM-AMISNSDEQKK

Query:  IKK-APRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEH
        +KK  PRKRL KKDRHSKI TARG RDRRMRLSLPVA+QFFGLQD+LGVDKGSKTVEWLL+QA+PEILKLA+E+N+ L +S + + +  S+ S   E ++
Subjt:  IKK-APRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEH

Query:  E-----NEKKLVVKKMKSGGKEMKKTRIK-KPIIRKPMAKEMRKKARERARARTIE-KNQILQISRDYSVISDFDHHD--PKINTSSC----FET---GE
        E      ++ L  K      K+ KK  I+ K + RK MAKE+R+KARERARART+E KNQI    RD    S  DHH    KI +SS     FET   GE
Subjt:  E-----NEKKLVVKKMKSGGKEMKKTRIK-KPIIRKPMAKEMRKKARERARARTIE-KNQILQISRDYSVISDFDHHD--PKINTSSC----FET---GE

Query:  ESGATTQISYNFNPPAMEVEDHHQPMSSQFGSDYQNSLE----IMGNWSPSA-STFNFLHQ
        ES  T   SYN +   + +E      +SQF   +  +      I+  WSPS  STFN LHQ
Subjt:  ESGATTQISYNFNPPAMEVEDHHQPMSSQFGSDYQNSLE----IMGNWSPSA-STFNFLHQ

TrEMBL top hitse value%identityAlignment
A0A0A0LVQ1 Uncharacterized protein1.5e-5649.86Show/hide
Query:  MFFSTNSCAKNGHELQHDPF--LKH---QDLHLPISFFPFPSPFEVDELFHEDHLFLQQPHKIPLPHNN--PEIINNSNSTA--PMAM-ISNSDE--QKK
        MFFSTNS     +   HDPF  L H      HLPISFFPFPSPFEVD+   + +     P      +NN  P II+  NS     M+M + NSD+  +K 
Subjt:  MFFSTNSCAKNGHELQHDPF--LKH---QDLHLPISFFPFPSPFEVDELFHEDHLFLQQPHKIPLPHNN--PEIINNSNSTA--PMAM-ISNSDE--QKK

Query:  IKKAP-RKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEH--
        +KK P RKRL KKDRHSKI TA+G RDRRMRLSLPVA+QFFGLQDMLGVDKGSKTVEWLL+QA+PEILKLA E+      ++  + S  S++SE+D    
Subjt:  IKKAP-RKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEH--

Query:  -----EHENEKKLVVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHD--PKINTSSC----FET--GEE
             ++ N K   +K  K   K+ K  R K+  IRK MAKE+R+KARERARART+EK +     RD +  SD DH      IN+SS     FET  GEE
Subjt:  -----EHENEKKLVVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHD--PKINTSSC----FET--GEE

Query:  S-GATTQISYNFNPPAMEVEDHHQPMSSQFGSDYQNSLE----IMGNWSPS-ASTFNFLHQ
        S G TT  SYN N         + P++SQF S +         I+  WSPS  STFNFLHQ
Subjt:  S-GATTQISYNFNPPAMEVEDHHQPMSSQFGSDYQNSLE----IMGNWSPS-ASTFNFLHQ

A0A6J1C779 uncharacterized protein LOC1110090361.7e-6899.28Show/hide
Query:  MKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKINTSSCFETGEESGATTQISYNFNPPAMEVEDHHQPM
        MKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKINTSSCFETGEESGATTQISYNFNPPAMEVEDHHQPM
Subjt:  MKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKINTSSCFETGEESGATTQISYNFNPPAMEVEDHHQPM

Query:  SSQFGSDYQNSLEIMGNWSPSASTFNFLHQTSTLDLQVQ
        SSQFGSDYQNSLEIMGNWSPS STFNFLHQTSTLDLQVQ
Subjt:  SSQFGSDYQNSLEIMGNWSPSASTFNFLHQTSTLDLQVQ

A0A6J1E7D2 transcription factor TCP18-like isoform X22.1e-5350.14Show/hide
Query:  MFFSTNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHED-HLFLQQPHK---IPLPHNNPEIINNSNSTAPMAMISNSDEQKKIKKAPRKR
        MFFST +   + H+  HD        HLPISFFPFPSPFEVDE + +  H F     K   IP P N   I+ ++        I NSD++K   K PRKR
Subjt:  MFFSTNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHED-HLFLQQPHK---IPLPHNNPEIINNSNSTAPMAMISNSDEQKKIKKAPRKR

Query:  LCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEHENEKKL---
        L KKDRHSKI TARG RDRRMRLSLPVARQFFGLQD+LGVDKGSKTVEWLL QA PEILKLAK+RN S  ++     +VCS+++  +        ++   
Subjt:  LCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEHENEKKL---

Query:  --VVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKIN-TSSC-----FET-GEESGATTQISYNFN
            KKM S    +K+ R K+P  R+ M KE+R+KARERARART+EK    QI +D S     DHH P  N  SSC     FET GEESG T   SYNFN
Subjt:  --VVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKIN-TSSC-----FET-GEESGATTQISYNFN

Query:  PPAMEVEDHHQPMSSQFGSDYQNSLEIMGNWSPSASTFNFL--HQTSTLDL
         P+MEVE+               S EIM  WSPS S+ NFL  H+    D+
Subjt:  PPAMEVEDHHQPMSSQFGSDYQNSLEIMGNWSPSASTFNFL--HQTSTLDL

A0A6J1KF56 transcription factor TCP18-like isoform X21.9e-5450.88Show/hide
Query:  MFFSTNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHED-HLFLQQPHKIPLPHNNPEIINNSNSTAPMAMISNSDEQKKIKKAPRKRLCK
        MFFST    KN  +  H         HLPISFFPFPSPFEVDE + +  H F     +I    +   ++ ++N+      I NSD++K   K PRKRL K
Subjt:  MFFSTNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHED-HLFLQQPHKIPLPHNNPEIINNSNSTAPMAMISNSDEQKKIKKAPRKRLCK

Query:  KDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCS-STSEIDEHEHENEKKLVVKKM
        KDRHSKI TARG RDRRMRLSLPVARQFFGLQD+LGVDKGSKTVEWLL QA PEILKLAK+RN S  ++     +VCS S S  + +  E +    + ++
Subjt:  KDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCS-STSEIDEHEHENEKKLVVKKM

Query:  KSGGKE------MKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKIN-TSSC-----FET-GEESGATTQISYNFNP
          GG +      +K+ R K+P  RK M KE+R+KARERARART+EK    QI +D    SD  HH P  N  SSC     FET GEESGAT   SYNFN 
Subjt:  KSGGKE------MKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKIN-TSSC-----FET-GEESGATTQISYNFNP

Query:  PAMEVEDHHQPMSSQFGSDYQNSLEIMGNWSPSASTFNFL
        PAME E+               S EIM  WSPS S+ NFL
Subjt:  PAMEVEDHHQPMSSQFGSDYQNSLEIMGNWSPSASTFNFL

A0A6J1KJS3 transcription factor TCP18-like isoform X11.9e-5450.88Show/hide
Query:  MFFSTNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHED-HLFLQQPHKIPLPHNNPEIINNSNSTAPMAMISNSDEQKKIKKAPRKRLCK
        MFFST    KN  +  H         HLPISFFPFPSPFEVDE + +  H F     +I    +   ++ ++N+      I NSD++K   K PRKRL K
Subjt:  MFFSTNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHED-HLFLQQPHKIPLPHNNPEIINNSNSTAPMAMISNSDEQKKIKKAPRKRLCK

Query:  KDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCS-STSEIDEHEHENEKKLVVKKM
        KDRHSKI TARG RDRRMRLSLPVARQFFGLQD+LGVDKGSKTVEWLL QA PEILKLAK+RN S  ++     +VCS S S  + +  E +    + ++
Subjt:  KDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCS-STSEIDEHEHENEKKLVVKKM

Query:  KSGGKE------MKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKIN-TSSC-----FET-GEESGATTQISYNFNP
          GG +      +K+ R K+P  RK M KE+R+KARERARART+EK    QI +D    SD  HH P  N  SSC     FET GEESGAT   SYNFN 
Subjt:  KSGGKE------MKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKIN-TSSC-----FET-GEESGATTQISYNFNP

Query:  PAMEVEDHHQPMSSQFGSDYQNSLEIMGNWSPSASTFNFL
        PAME E+               S EIM  WSPS S+ NFL
Subjt:  PAMEVEDHHQPMSSQFGSDYQNSLEIMGNWSPSASTFNFL

SwissProt top hitse value%identityAlignment
A0AQW4 Transcription factor TCP122.7e-1833.7Show/hide
Query:  NGHELQHDPFLKHQDLHLPISF-----------------FPFPSPF--EVDELFHEDHLFLQQP--------------HKIPLPHNNPEIINNSNSTAPM
        NG++L  DPF+ HQ    P SF                 FPF S F    DE F  +   LQQ                K+ L   N + ++ S S    
Subjt:  NGHELQHDPFLKHQDLHLPISF-----------------FPFPSPF--EVDELFHEDHLFLQQP--------------HKIPLPHNNPEIINNSNSTAPM

Query:  AMISNSDEQKKIKKAPRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCS
                    +   R+ + K+DRHSKICTA+G RDRRMRLSL +AR+FF LQDMLG DK SKT+EWL  +++  I +L +    S G   D       
Subjt:  AMISNSDEQKKIKKAPRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCS

Query:  STSEIDEHEHENEKKLVVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISD
           ++DE E +   KL V K ++           K +      KE R++AR+RAR RT+ K + +++      ISD
Subjt:  STSEIDEHEHENEKKLVVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISD

A1YKT1 Transcription factor TCP181.1e-2235.19Show/hide
Query:  TNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHEDHLFLQQPHKIPLPHNNPEI---INNS---NSTAPMAMISNSDEQKKIKKA--PRKR
        + S   N H   H  F +      P S F F     +   FH ++        IP  +++P +   +NN+     T P   I+  ++ ++I  +  P+ +
Subjt:  TNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHEDHLFLQQPHKIPLPHNNPEI---INNS---NSTAPMAMISNSDEQKKIKKA--PRKR

Query:  LCKK----DRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYS--------------LGLSLDRAKSVCSS
          KK    DRHSKI TA+G RDRRMRLSL VA++ FGLQDMLG DK SKTVEWLL QA+PEI+K+A   ++               LG S+D +  +C  
Subjt:  LCKK----DRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYS--------------LGLSLDRAKSVCSS

Query:  TS--EIDEHEHENEKKLVVKKMKSGGKEM----KKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSV-ISDFDHHD
         S   +D+    N      +  K  G+ M    K+   + PI++K ++KE R KARERA+ RT+EK  +    R   V + + D HD
Subjt:  TS--EIDEHEHENEKKLVVKKMKSGGKEM----KKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSV-ISDFDHHD

O49250 Transcription factor CYCLOIDEA2.5e-1638.55Show/hide
Query:  NNSNSTAPMAMISNSDEQKKIKKAPRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLS
        NN+N    +    N D        P K+  KKDRHSKI T++G RDRR+RLS+ +AR+FF LQ+MLG DK SKT++WLL +++  I +L + ++     +
Subjt:  NNSNSTAPMAMISNSDEQKKIKKAPRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLS

Query:  LDRAKSVCSSTSEIDEHEHENEKKLVVKKMKSGGKEMKKTRIKKPII--RKPMAKEMRKKARERARARTIEKNQILQIS
           + S C    E+   + EN          S GK +K     K  +   +  AKE R KAR RAR RT EK  I Q++
Subjt:  LDRAKSVCSSTSEIDEHEHENEKKLVVKKMKSGGKEMKKTRIKKPII--RKPMAKEMRKKARERARARTIEKNQILQIS

Q9SBV6 Transcription factor CYCLOIDEA (Fragment)2.5e-1638.55Show/hide
Query:  NNSNSTAPMAMISNSDEQKKIKKAPRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLS
        NN+N    +    N D        P K+  KKDRHSKI T++G RDRR+RLS+ +AR+FF LQ+MLG DK SKT++WLL +++  I +L + ++     +
Subjt:  NNSNSTAPMAMISNSDEQKKIKKAPRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLS

Query:  LDRAKSVCSSTSEIDEHEHENEKKLVVKKMKSGGKEMKKTRIKKPII--RKPMAKEMRKKARERARARTIEKNQILQIS
           + S C    E+   + EN          S GK +K     K  +   +  AKE R KAR RAR RT EK  I Q++
Subjt:  LDRAKSVCSSTSEIDEHEHENEKKLVVKKMKSGGKEMKKTRIKKPII--RKPMAKEMRKKARERARARTIEKNQILQIS

Q9SBV9 Transcription factor CYCLOIDEA (Fragment)1.5e-1638.55Show/hide
Query:  NNSNSTAPMAMISNSDEQKKIKKAPRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLS
        NN+N    +    N D        P K+  KKDRHSKI T++G RDRR+RLS+ +AR+FF LQ+MLG DK SKT++WLL +++  + +L + ++     +
Subjt:  NNSNSTAPMAMISNSDEQKKIKKAPRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLS

Query:  LDRAKSVCSSTSEIDEHEHENEKKLVVKKMKSGGKEMKKTRIKKPII--RKPMAKEMRKKARERARARTIEKNQILQIS
           + S C    E+   E EN          S GK +K     K  +   +  AKE R KAR RAR RT EK  I Q++
Subjt:  LDRAKSVCSSTSEIDEHEHENEKKLVVKKMKSGGKEMKKTRIKKPII--RKPMAKEMRKKARERARARTIEKNQILQIS

Arabidopsis top hitse value%identityAlignment
AT1G67260.1 TCP family transcription factor4.9e-1540.4Show/hide
Query:  KRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEHENEKKLV
        K++ KKDRHSKI TA+G RDRR+RLS+ +ARQFF LQDMLG DK SKT++WLL ++R  I ++ + +N +     D          E ++ E +N  K  
Subjt:  KRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEHENEKKLV

Query:  VKKMKSGGKEMKKT--------RIKKPIIRKPMAKEMRKKARERARARTIE
        V  +  G  E +          R KK  +R   +K +  KAR +A+ RT E
Subjt:  VKKMKSGGKEMKKT--------RIKKPIIRKPMAKEMRKKARERARARTIE

AT1G67260.2 TCP family transcription factor4.9e-1540.4Show/hide
Query:  KRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEHENEKKLV
        K++ KKDRHSKI TA+G RDRR+RLS+ +ARQFF LQDMLG DK SKT++WLL ++R  I ++ + +N +     D          E ++ E +N  K  
Subjt:  KRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEHENEKKLV

Query:  VKKMKSGGKEMKKT--------RIKKPIIRKPMAKEMRKKARERARARTIE
        V  +  G  E +          R KK  +R   +K +  KAR +A+ RT E
Subjt:  VKKMKSGGKEMKKT--------RIKKPIIRKPMAKEMRKKARERARARTIE

AT1G68800.1 TCP domain protein 121.9e-1933.7Show/hide
Query:  NGHELQHDPFLKHQDLHLPISF-----------------FPFPSPF--EVDELFHEDHLFLQQP--------------HKIPLPHNNPEIINNSNSTAPM
        NG++L  DPF+ HQ    P SF                 FPF S F    DE F  +   LQQ                K+ L   N + ++ S S    
Subjt:  NGHELQHDPFLKHQDLHLPISF-----------------FPFPSPF--EVDELFHEDHLFLQQP--------------HKIPLPHNNPEIINNSNSTAPM

Query:  AMISNSDEQKKIKKAPRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCS
                    +   R+ + K+DRHSKICTA+G RDRRMRLSL +AR+FF LQDMLG DK SKT+EWL  +++  I +L +    S G   D       
Subjt:  AMISNSDEQKKIKKAPRKRLCKKDRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCS

Query:  STSEIDEHEHENEKKLVVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISD
           ++DE E +   KL V K ++           K +      KE R++AR+RAR RT+ K + +++      ISD
Subjt:  STSEIDEHEHENEKKLVVKKMKSGGKEMKKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSVISD

AT3G18550.1 TCP family transcription factor7.6e-2435.19Show/hide
Query:  TNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHEDHLFLQQPHKIPLPHNNPEI---INNS---NSTAPMAMISNSDEQKKIKKA--PRKR
        + S   N H   H  F +      P S F F     +   FH ++        IP  +++P +   +NN+     T P   I+  ++ ++I  +  P+ +
Subjt:  TNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHEDHLFLQQPHKIPLPHNNPEI---INNS---NSTAPMAMISNSDEQKKIKKA--PRKR

Query:  LCKK----DRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYS--------------LGLSLDRAKSVCSS
          KK    DRHSKI TA+G RDRRMRLSL VA++ FGLQDMLG DK SKTVEWLL QA+PEI+K+A   ++               LG S+D +  +C  
Subjt:  LCKK----DRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYS--------------LGLSLDRAKSVCSS

Query:  TS--EIDEHEHENEKKLVVKKMKSGGKEM----KKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSV-ISDFDHHD
         S   +D+    N      +  K  G+ M    K+   + PI++K ++KE R KARERA+ RT+EK  +    R   V + + D HD
Subjt:  TS--EIDEHEHENEKKLVVKKMKSGGKEM----KKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSV-ISDFDHHD

AT3G18550.2 TCP family transcription factor2.6e-2435.82Show/hide
Query:  TNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHEDHLFLQQPHKIPLPHNNPEI---INNS---NSTAPMAMISNSDEQKKIKKA--PRKR
        + S   N H   H  F +      P S F F     +   FH ++        IP  +++P +   +NN+     T P   I+  ++ ++I  +  P+ +
Subjt:  TNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHEDHLFLQQPHKIPLPHNNPEI---INNS---NSTAPMAMISNSDEQKKIKKA--PRKR

Query:  LCKK----DRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERN----YSLG-----LSLDRAKSVCSSTS--E
          KK    DRHSKI TA+G RDRRMRLSL VA++ FGLQDMLG DK SKTVEWLL QA+PEI+K+A   +    +S G      S+D +  +C   S   
Subjt:  LCKK----DRHSKICTARGQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERN----YSLG-----LSLDRAKSVCSSTS--E

Query:  IDEHEHENEKKLVVKKMKSGGKEM----KKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSV-ISDFDHHD
        +D+    N      +  K  G+ M    K+   + PI++K ++KE R KARERA+ RT+EK  +    R   V + + D HD
Subjt:  IDEHEHENEKKLVVKKMKSGGKEM----KKTRIKKPIIRKPMAKEMRKKARERARARTIEKNQILQISRDYSV-ISDFDHHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCTCCACCAATAGTTGTGCCAAAAATGGGCATGAGCTGCAGCATGACCCATTTCTCAAACACCAAGATTTACATCTCCCCATCTCTTTCTTCCCCTTTCCTTC
CCCTTTTGAGGTTGATGAATTATTCCATGAAGATCACTTGTTCCTCCAACAACCCCACAAAATCCCTCTTCCTCATAACAACCCTGAGATTATTAATAATAGTAATTCCA
CAGCTCCCATGGCCATGATTTCAAATTCAGATGAGCAGAAGAAGATCAAGAAGGCCCCAAGAAAAAGGTTGTGCAAAAAGGACAGGCACAGCAAAATCTGCACAGCTCGT
GGGCAAAGGGACAGAAGAATGAGGCTCTCCCTCCCAGTGGCTCGGCAGTTCTTTGGGCTACAGGACATGTTGGGGGTTGACAAGGGAAGCAAGACAGTGGAATGGCTGCT
GGTACAGGCCAGACCAGAAATCTTAAAACTTGCTAAGGAAAGAAATTACAGCCTTGGCCTCAGCCTTGACCGAGCCAAAAGTGTTTGCTCCTCCACTTCTGAAATTGACG
AGCATGAGCATGAAAATGAGAAGAAATTAGTGGTTAAAAAGATGAAATCTGGTGGGAAAGAGATGAAGAAGACGAGGATTAAAAAGCCAATAATCAGGAAACCCATGGCC
AAGGAGATGAGGAAGAAGGCTAGGGAAAGGGCAAGGGCAAGGACTATTGAGAAGAATCAGATATTGCAGATTAGCCGGGATTATTCAGTAATTTCTGATTTTGATCATCA
TGATCCCAAAATTAATACATCTTCTTGCTTTGAGACTGGGGAGGAATCAGGTGCTACCACTCAGATCAGCTACAATTTCAACCCACCTGCCATGGAAGTTGAAGATCATC
ATCAACCAATGAGCTCCCAATTCGGATCTGATTATCAAAATTCTTTGGAGATTATGGGAAACTGGAGCCCTTCTGCTTCCACTTTCAATTTTCTGCACCAAACTTCAACT
CTTGATCTCCAAGTTCAGGTGAAT
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTCTCCACCAATAGTTGTGCCAAAAATGGGCATGAGCTGCAGCATGACCCATTTCTCAAACACCAAGATTTACATCTCCCCATCTCTTTCTTCCCCTTTCCTTC
CCCTTTTGAGGTTGATGAATTATTCCATGAAGATCACTTGTTCCTCCAACAACCCCACAAAATCCCTCTTCCTCATAACAACCCTGAGATTATTAATAATAGTAATTCCA
CAGCTCCCATGGCCATGATTTCAAATTCAGATGAGCAGAAGAAGATCAAGAAGGCCCCAAGAAAAAGGTTGTGCAAAAAGGACAGGCACAGCAAAATCTGCACAGCTCGT
GGGCAAAGGGACAGAAGAATGAGGCTCTCCCTCCCAGTGGCTCGGCAGTTCTTTGGGCTACAGGACATGTTGGGGGTTGACAAGGGAAGCAAGACAGTGGAATGGCTGCT
GGTACAGGCCAGACCAGAAATCTTAAAACTTGCTAAGGAAAGAAATTACAGCCTTGGCCTCAGCCTTGACCGAGCCAAAAGTGTTTGCTCCTCCACTTCTGAAATTGACG
AGCATGAGCATGAAAATGAGAAGAAATTAGTGGTTAAAAAGATGAAATCTGGTGGGAAAGAGATGAAGAAGACGAGGATTAAAAAGCCAATAATCAGGAAACCCATGGCC
AAGGAGATGAGGAAGAAGGCTAGGGAAAGGGCAAGGGCAAGGACTATTGAGAAGAATCAGATATTGCAGATTAGCCGGGATTATTCAGTAATTTCTGATTTTGATCATCA
TGATCCCAAAATTAATACATCTTCTTGCTTTGAGACTGGGGAGGAATCAGGTGCTACCACTCAGATCAGCTACAATTTCAACCCACCTGCCATGGAAGTTGAAGATCATC
ATCAACCAATGAGCTCCCAATTCGGATCTGATTATCAAAATTCTTTGGAGATTATGGGAAACTGGAGCCCTTCTGCTTCCACTTTCAATTTTCTGCACCAAACTTCAACT
CTTGATCTCCAAGTTCAGGTGAAT
Protein sequenceShow/hide protein sequence
MFFSTNSCAKNGHELQHDPFLKHQDLHLPISFFPFPSPFEVDELFHEDHLFLQQPHKIPLPHNNPEIINNSNSTAPMAMISNSDEQKKIKKAPRKRLCKKDRHSKICTAR
GQRDRRMRLSLPVARQFFGLQDMLGVDKGSKTVEWLLVQARPEILKLAKERNYSLGLSLDRAKSVCSSTSEIDEHEHENEKKLVVKKMKSGGKEMKKTRIKKPIIRKPMA
KEMRKKARERARARTIEKNQILQISRDYSVISDFDHHDPKINTSSCFETGEESGATTQISYNFNPPAMEVEDHHQPMSSQFGSDYQNSLEIMGNWSPSASTFNFLHQTST
LDLQVQVN