; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004046 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004046
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPeptidyl-tRNA hydrolase
Genome locationscaffold1597:729599..732557
RNA-Seq ExpressionMS004046
SyntenyMS004046
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR001328 - Peptidyl-tRNA hydrolase
IPR018171 - Peptidyl-tRNA hydrolase, conserved site
IPR036416 - Peptidyl-tRNA hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137468.1 peptidyl-tRNA hydrolase, chloroplastic [Cucumis sativus]4.8e-12183.88Show/hide
Query:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP-----NSGSLRIFS--------SMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNV
        M IG SISS+AALRLP   HCF TSK L SFP     +S +  IFS        SMSTSS PT +Q A+DDKKP+PPPKPWLIVGLGNPGKKYD TRHNV
Subjt:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP-----NSGSLRIFS--------SMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNV

Query:  GFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHL
        GFEMVD VAEAEGIS+S+VSFKALIGKGFIGDVP+MLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPF KLRMLPKGGHGG NGMRSIIDH 
Subjt:  GFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHL

Query:  KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVG +AIRILLLEGFNKSATFVNTNK LEQI
Subjt:  KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

XP_008457243.1 PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Cucumis melo]6.7e-12383.88Show/hide
Query:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFPNSGSLR-------------IFSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNV
        MNIG SISS+AALRLP  +H FRTS+ L SFP+   L              I +SMSTSS PT DQ A+DDKKP+PPPKPWLIVGLGNPGKKYD TRHNV
Subjt:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFPNSGSLR-------------IFSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNV

Query:  GFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHL
        GFEMVD VAEAEGIS+S+VSFKALIGKGFIGDVP+MLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPF KLRMLPKGGHGG NGMRSIIDH 
Subjt:  GFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHL

Query:  KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVG +AIRILLLEGFNKSATFVNTNKPLEQI
Subjt:  KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

XP_022136978.1 peptidyl-tRNA hydrolase, chloroplastic [Momordica charantia]5.8e-143100Show/hide
Query:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFPNSGSLRIFSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEG
        MNIGVSISSIAALRLPIRLHCFRTSKILTSFPNSGSLRIFSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEG
Subjt:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFPNSGSLRIFSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEG

Query:  ISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGI
        ISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGI
Subjt:  ISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGI

Query:  GRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        GRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
Subjt:  GRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

XP_023541955.1 peptidyl-tRNA hydrolase, chloroplastic [Cucurbita pepo subsp. pepo]3.3e-12283.82Show/hide
Query:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP----NSGSLRIF--------SSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVG
        M+ G S+SS+AALR PI LHCFRT +   SFP    N GSL IF        +SMSTSSP   DQLAV++KKP+PPPKPWLIVGLGNPGKKY+ TRHNVG
Subjt:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP----NSGSLRIF--------SSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVG

Query:  FEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLK
        FEMVD VAE EGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPF KLRMLPKGGHGG NGMRSIIDHLK
Subjt:  FEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLK

Query:  GSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        GSRDFPRLRIGIGRPPGKMDAANFV+RPFNKQEREEL+FT+QVG++AIRILLLEGFNKSATFVNTNKPLEQI
Subjt:  GSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

XP_038893864.1 peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Benincasa hispida]5.3e-12887.59Show/hide
Query:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP-----NSGSLRIFS---------SMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHN
        MN+G SISS+ ALRLPI LHCFRTSK L SFP     NSG+  IFS         SMSTSS PT DQL VDDKKP+PPPKPWLIVGLGNPGKKYD TRHN
Subjt:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP-----NSGSLRIFS---------SMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHN

Query:  VGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDH
        VGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVP+MLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPF KLRMLPKGGHGG NGMRSIIDH
Subjt:  VGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDH

Query:  LKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        LKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVG +AIRILLLEGFNKSATFVNTNKPLEQI
Subjt:  LKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

TrEMBL top hitse value%identityAlignment
A0A0A0LVQ7 Uncharacterized protein2.3e-12183.88Show/hide
Query:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP-----NSGSLRIFS--------SMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNV
        M IG SISS+AALRLP   HCF TSK L SFP     +S +  IFS        SMSTSS PT +Q A+DDKKP+PPPKPWLIVGLGNPGKKYD TRHNV
Subjt:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP-----NSGSLRIFS--------SMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNV

Query:  GFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHL
        GFEMVD VAEAEGIS+S+VSFKALIGKGFIGDVP+MLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPF KLRMLPKGGHGG NGMRSIIDH 
Subjt:  GFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHL

Query:  KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVG +AIRILLLEGFNKSATFVNTNK LEQI
Subjt:  KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

A0A1S3C5R3 peptidyl-tRNA hydrolase, chloroplastic3.2e-12383.88Show/hide
Query:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFPNSGSLR-------------IFSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNV
        MNIG SISS+AALRLP  +H FRTS+ L SFP+   L              I +SMSTSS PT DQ A+DDKKP+PPPKPWLIVGLGNPGKKYD TRHNV
Subjt:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFPNSGSLR-------------IFSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNV

Query:  GFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHL
        GFEMVD VAEAEGIS+S+VSFKALIGKGFIGDVP+MLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPF KLRMLPKGGHGG NGMRSIIDH 
Subjt:  GFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHL

Query:  KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVG +AIRILLLEGFNKSATFVNTNKPLEQI
Subjt:  KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

A0A6J1C906 peptidyl-tRNA hydrolase, chloroplastic2.8e-143100Show/hide
Query:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFPNSGSLRIFSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEG
        MNIGVSISSIAALRLPIRLHCFRTSKILTSFPNSGSLRIFSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEG
Subjt:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFPNSGSLRIFSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEG

Query:  ISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGI
        ISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGI
Subjt:  ISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGI

Query:  GRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        GRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
Subjt:  GRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

A0A6J1GS97 peptidyl-tRNA hydrolase, chloroplastic-like isoform X11.3e-11982.35Show/hide
Query:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP----NSGSLRIFS--------SMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVG
        MNI  S+SS+AALRLP+ LHCFRT +   SFP    N  SL IFS        SMSTSSP   D LAV++ KP+PPPKPWLIVGLGNPGKKY+ TRHNVG
Subjt:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP----NSGSLRIFS--------SMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVG

Query:  FEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLK
        FEMVD VA  EGISMSS SFKALIGKGFIGDVP+MLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPF KLRMLPKGGHGG NGMRSIIDHLK
Subjt:  FEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLK

Query:  GSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        GSRDFPRLRIGIGRPPGKMDAANFV+RPFNKQEREEL+FT+QVG++AIRILLLEGFNKSATFVNTNKPLEQI
Subjt:  GSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

A0A6J1JW15 peptidyl-tRNA hydrolase, mitochondrial isoform X18.8e-12183.09Show/hide
Query:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP----NSGSLRIFS--------SMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVG
        MNI  S+SS+AALRLPI LHCF T +   SFP    N  SL IFS        SMSTSSP   DQLAV++KKP+PPPKPWLIVGLGNPGKKY+ TRHNVG
Subjt:  MNIGVSISSIAALRLPIRLHCFRTSKILTSFP----NSGSLRIFS--------SMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVG

Query:  FEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLK
        FEM+D VAE EGISMSS SFKALIGKGFIGDVP+MLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPF KLRMLPKGGHGG NGMRSIIDHLK
Subjt:  FEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLK

Query:  GSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        GSRDFPRLRIGIGRPPGKMDAANFV+RPFNKQEREEL+FT+QVG++AIRILLLEGFNKSATFVNTNKPLEQI
Subjt:  GSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

SwissProt top hitse value%identityAlignment
Q5N9Q7 Peptidyl-tRNA hydrolase, mitochondrial3.6e-8776.92Show/hide
Query:  KPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGK
        KPWL VGLGNPGK Y GTRHNVGFEM+D +AEAEGIS+SS+ FKA++GKG IGD PIMLAKPQTFMNASGESVG +VSY+KIPL QVLV++DDLDLPF K
Subjt:  KPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGK

Query:  LRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        LR+LPKGGHGG NG+RSII+HLK +RDFPRLRIGIGRPPGKMD ANFVLRPFN++E+EEL+F    GLEA+RI+ LEGFNKSAT+VNT +  E +
Subjt:  LRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

Q6NLS8 Peptidyl-tRNA hydrolase, mitochondrial1.1e-5950.77Show/hide
Query:  KPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGK
        +PWL +GLGNPG KY GTRHN+GFEM+D  AE+ GI M+ V+FKA++G+GF+ D+P++LAKPQT+MN SGES G + +YYK+PL +VLV+ DD+ LP G 
Subjt:  KPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGK

Query:  LRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        LR+  KGGHG  NG++S+++H +G+R+F RLRIGIG+PPG+MD   F+L+ F+   RE ++  L  G++A++++L + F +S    N  +  + +
Subjt:  LRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

Q8GW64 Peptidyl-tRNA hydrolase, chloroplastic4.2e-9678.57Show/hide
Query:  FSSMSTSSPPTADQL-AVDDKKPSPPP--KPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGE
        FSS S SS P ++ L A+   KP  PP   PWLIVGLGNPGKKY GTRHNVGFEMVD +A+AEGISM++V+FKAL GKG IG++PIMLAKPQTFMN SGE
Subjt:  FSSMSTSSPPTADQL-AVDDKKPSPPP--KPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGE

Query:  SVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAI
        SVG IVS+YKIPLKQVLV++DDLDLPFGKLR+LPKGGHGG NGMRSIID LKGSRDFPRLRIGIGRPPGKMD ANFVLR FN+QE+EEL+ T Q GLEAI
Subjt:  SVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAI

Query:  RILLLEGFNKSATFVNTNKPLEQI
        RILLLEGFNKSATFVNT K +EQ+
Subjt:  RILLLEGFNKSATFVNTNKPLEQI

Q9LF14 Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic1.1e-5955.91Show/hide
Query:  PWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKL
        PWLIVGLGNPG KY GTRHNVGFEM+D +A  EG+ M+++  KALIG G I DVPI+LAKPQT+MN SGESVG++ S+Y++PL+ +L+I+D++ LP G L
Subjt:  PWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKL

Query:  RMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVN
        R+ PKGG G  NG++S++ HL G R+FPRL IGIG+PPG MD   F+L+ F+  E++++   L+ G EA++ L+L GFN+  +  N
Subjt:  RMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVN

Q9M5P4 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic1.9e-5953.76Show/hide
Query:  PWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKL
        PWLI GLGNPG KY GTRHNVGFEMVD +A  EGI+M+++  K+L+G G IG+VP+++ KPQ++MN SGE++G + +YY++PL+ +L+I+DD  LP G L
Subjt:  PWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKL

Query:  RMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVN
        R+  KGGHG  NG++++I+HL G R+FPRL IGIG PPGKMD   F+L+ F+ +ER +++  L+ G++A+R L+L+GF+ S    N
Subjt:  RMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVN

Arabidopsis top hitse value%identityAlignment
AT1G18440.1 Peptidyl-tRNA hydrolase family protein3.0e-9778.57Show/hide
Query:  FSSMSTSSPPTADQL-AVDDKKPSPPP--KPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGE
        FSS S SS P ++ L A+   KP  PP   PWLIVGLGNPGKKY GTRHNVGFEMVD +A+AEGISM++V+FKAL GKG IG++PIMLAKPQTFMN SGE
Subjt:  FSSMSTSSPPTADQL-AVDDKKPSPPP--KPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGE

Query:  SVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAI
        SVG IVS+YKIPLKQVLV++DDLDLPFGKLR+LPKGGHGG NGMRSIID LKGSRDFPRLRIGIGRPPGKMD ANFVLR FN+QE+EEL+ T Q GLEAI
Subjt:  SVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAI

Query:  RILLLEGFNKSATFVNTNKPLEQI
        RILLLEGFNKSATFVNT K +EQ+
Subjt:  RILLLEGFNKSATFVNTNKPLEQI

AT5G16140.1 Peptidyl-tRNA hydrolase family protein7.8e-6155.91Show/hide
Query:  PWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKL
        PWLIVGLGNPG KY GTRHNVGFEM+D +A  EG+ M+++  KALIG G I DVPI+LAKPQT+MN SGESVG++ S+Y++PL+ +L+I+D++ LP G L
Subjt:  PWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKL

Query:  RMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVN
        R+ PKGG G  NG++S++ HL G R+FPRL IGIG+PPG MD   F+L+ F+  E++++   L+ G EA++ L+L GFN+  +  N
Subjt:  RMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVN

AT5G16140.2 Peptidyl-tRNA hydrolase family protein7.8e-6155.91Show/hide
Query:  PWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKL
        PWLIVGLGNPG KY GTRHNVGFEM+D +A  EG+ M+++  KALIG G I DVPI+LAKPQT+MN SGESVG++ S+Y++PL+ +L+I+D++ LP G L
Subjt:  PWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKL

Query:  RMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVN
        R+ PKGG G  NG++S++ HL G R+FPRL IGIG+PPG MD   F+L+ F+  E++++   L+ G EA++ L+L GFN+  +  N
Subjt:  RMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVN

AT5G19830.1 Peptidyl-tRNA hydrolase family protein7.8e-6150.77Show/hide
Query:  KPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGK
        +PWL +GLGNPG KY GTRHN+GFEM+D  AE+ GI M+ V+FKA++G+GF+ D+P++LAKPQT+MN SGES G + +YYK+PL +VLV+ DD+ LP G 
Subjt:  KPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGK

Query:  LRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI
        LR+  KGGHG  NG++S+++H +G+R+F RLRIGIG+PPG+MD   F+L+ F+   RE ++  L  G++A++++L + F +S    N  +  + +
Subjt:  LRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI

AT5G38290.2 Peptidyl-tRNA hydrolase family protein4.0e-5749.77Show/hide
Query:  FSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVG
        FSS+  S P +      D+K       PWLIVGLGNPG KY GTRHN+GFEM+D +A A  ISM+++  KAL+G G +G+VPI+L KPQ +MN SGESVG
Subjt:  FSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPIMLAKPQTFMNASGESVG

Query:  AIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRIL
         + +YY+IPL+ +L+I+DD+ L  G LR+ PKGGH   NG++++ +HL G R +PRL IGIG PPG MD   F+L+ F+  ER++++  L+ G+E ++ L
Subjt:  AIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGLEAIRIL

Query:  LLEGFNKSATFVN
        + EGF+ S +  N
Subjt:  LLEGFNKSATFVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTGGTGTTTCTATATCTTCAATTGCTGCCCTCCGCCTTCCTATTCGCCTCCATTGCTTTCGCACCTCCAAAATCCTCACATCCTTCCCGAATTCTGGAAGCTT
ACGTATCTTTTCGTCAATGTCCACATCCTCGCCTCCGACCGCGGATCAGCTGGCTGTAGATGACAAGAAGCCCTCGCCGCCGCCCAAGCCATGGCTCATCGTGGGCCTTG
GGAACCCTGGGAAGAAATATGATGGCACGCGCCATAATGTAGGTTTTGAGATGGTGGATACTGTAGCTGAAGCTGAAGGGATATCCATGAGTAGTGTATCCTTCAAAGCT
CTGATCGGGAAAGGTTTCATCGGGGATGTTCCCATAATGCTAGCCAAGCCACAAACTTTCATGAATGCAAGTGGTGAGTCTGTTGGTGCTATTGTTTCCTACTATAAGAT
TCCATTGAAGCAAGTACTTGTGATTTTTGATGACTTAGATTTGCCATTTGGCAAATTGCGGATGCTGCCAAAGGGTGGCCATGGAGGACAAAATGGGATGAGGAGTATTA
TTGATCACTTGAAGGGAAGTCGTGATTTCCCTCGATTAAGAATTGGCATTGGACGCCCTCCCGGGAAAATGGATGCTGCAAACTTTGTTCTGCGGCCCTTCAACAAACAA
GAACGAGAAGAGTTGAATTTTACACTGCAAGTTGGCTTGGAGGCGATTCGGATCCTTTTGCTCGAGGGGTTTAACAAAAGTGCAACATTTGTCAACACCAACAAACCTCT
GGAACAAATA
mRNA sequenceShow/hide mRNA sequence
ATGAATATTGGTGTTTCTATATCTTCAATTGCTGCCCTCCGCCTTCCTATTCGCCTCCATTGCTTTCGCACCTCCAAAATCCTCACATCCTTCCCGAATTCTGGAAGCTT
ACGTATCTTTTCGTCAATGTCCACATCCTCGCCTCCGACCGCGGATCAGCTGGCTGTAGATGACAAGAAGCCCTCGCCGCCGCCCAAGCCATGGCTCATCGTGGGCCTTG
GGAACCCTGGGAAGAAATATGATGGCACGCGCCATAATGTAGGTTTTGAGATGGTGGATACTGTAGCTGAAGCTGAAGGGATATCCATGAGTAGTGTATCCTTCAAAGCT
CTGATCGGGAAAGGTTTCATCGGGGATGTTCCCATAATGCTAGCCAAGCCACAAACTTTCATGAATGCAAGTGGTGAGTCTGTTGGTGCTATTGTTTCCTACTATAAGAT
TCCATTGAAGCAAGTACTTGTGATTTTTGATGACTTAGATTTGCCATTTGGCAAATTGCGGATGCTGCCAAAGGGTGGCCATGGAGGACAAAATGGGATGAGGAGTATTA
TTGATCACTTGAAGGGAAGTCGTGATTTCCCTCGATTAAGAATTGGCATTGGACGCCCTCCCGGGAAAATGGATGCTGCAAACTTTGTTCTGCGGCCCTTCAACAAACAA
GAACGAGAAGAGTTGAATTTTACACTGCAAGTTGGCTTGGAGGCGATTCGGATCCTTTTGCTCGAGGGGTTTAACAAAAGTGCAACATTTGTCAACACCAACAAACCTCT
GGAACAAATA
Protein sequenceShow/hide protein sequence
MNIGVSISSIAALRLPIRLHCFRTSKILTSFPNSGSLRIFSSMSTSSPPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVSFKA
LIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQ
EREELNFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI