; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004050 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004050
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome locationscaffold1597:773897..774095
RNA-Seq ExpressionMS004050
SyntenyMS004050
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EFH39558.1 NADH-plastoquinone oxidoreductase subunit 1 [Arabidopsis lyrata subsp. lyrata]3.9e-1166.67Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F+IFLISSLAE +RLP DLP  EEEL+AGYQ IEY  IKFGLFYV  ++  +I   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

KAF2546772.1 hypothetical protein F2Q70_00023480, partial [Brassica cretica]2.3e-1166.67Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F+IFLISSLAE +RLP DLP  EEEL+AGYQ  EY DIKFGLFYV  ++  +I   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

QRI59730.1 NADH dehydrogenase subunit 1 [Dahlstedtia araripensis]1.7e-1165.15Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F++FLISSLAE +RLP DLP  EEELVAGYQ  EY  IKFGLFY+ Y++  +I   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

YP_009770397.1 NdhA [Umtiza listeriana]2.9e-1165.15Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F++FLISSLAE +RLP DLP  EEELVAGYQ  EY DIKFGLFYV  ++  ++   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

YP_010044959.1 NADH-plastoquinone oxidoreductase subunit 1 [Dianyuea turbinata]8.6e-1165.15Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F+IFLISSLAE +RLP DLP  EEELVAGYQ  EY  IKFGLFYV+ ++  ++   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

TrEMBL top hitse value%identityAlignment
A0A0G3F3B7 NADH-quinone oxidoreductase subunit H5.4e-1166.67Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F+IFLISSLAE +RLP DLP  EEELVAGYQ  EY  IKFGLFYV  ++  +I   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

A0A218KGA1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic5.4e-1166.67Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I FVIFLISSLAE +RLP DLP  EEELVAGYQ  EY  IKFGLFYV  ++  ++   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

A0A6H0EHY6 NADH-quinone oxidoreductase subunit H1.4e-1165.15Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F++FLISSLAE +RLP DLP  EEELVAGYQ  EY DIKFGLFYV  ++  ++   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

A0A7S9DE62 NADH-plastoquinone oxidoreductase subunit 14.2e-1165.15Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F+IFLISSLAE +RLP DLP  EEELVAGYQ  EY  IKFGLFYV+ ++  ++   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

D7MVL9 NADH-plastoquinone oxidoreductase subunit 11.9e-1166.67Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F+IFLISSLAE +RLP DLP  EEEL+AGYQ IEY  IKFGLFYV  ++  +I   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

SwissProt top hitse value%identityAlignment
A4QJH1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.5e-1366.67Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F+IFLISSLAE +RLP DLP  EEELVAGYQ  EY  IKFGLFYV  ++  +I   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

A4QJQ5 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.5e-1366.67Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F+IFLISSLAE +RLP DLP  EEELVAGYQ  EY  IKFGLFYV  ++  +I   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

A4QK75 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.1e-1366.67Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F+IFLISSLAE +RLP DLP  EEEL+AGYQ  EY  IKFGLFYV  +I  +I   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

Q2QD36 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.5e-1366.67Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I FVIFLISSLAE +RLP DLP  EEELVAGYQ  EY  IKFGLFYV  ++  ++   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

Q37165 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.9e-1365.15Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F+IFLISSLAE +RLP DLP  EEEL+AGYQ  EY  IKFGLFYV  ++  +I   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF

Arabidopsis top hitse value%identityAlignment
ATCG01100.1 NADH dehydrogenase family protein1.4e-1465.15Show/hide
Query:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF
        WNLWRQ I F+IFLISSLAE +RLP DLP  EEEL+AGYQ  EY  IKFGLFYV  ++  +I   F
Subjt:  WNLWRQFIRFVIFLISSLAE-DRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAATTTGTGGCGTCAATTTATAAGGTTTGTTATTTTTCTAATTTCTTCATTAGCAGAAGATAGATTACCTCTTGATTTACCATATGTAGAAGAAGAGTTAGTAGCGGG
TTATCAAATTATCGAGTATTTGGATATCAAATTTGGTTTATTTTATGTAATGTACTTTATCTACTGGATTATCGGGGGAGCATTT
mRNA sequenceShow/hide mRNA sequence
TGGAATTTGTGGCGTCAATTTATAAGGTTTGTTATTTTTCTAATTTCTTCATTAGCAGAAGATAGATTACCTCTTGATTTACCATATGTAGAAGAAGAGTTAGTAGCGGG
TTATCAAATTATCGAGTATTTGGATATCAAATTTGGTTTATTTTATGTAATGTACTTTATCTACTGGATTATCGGGGGAGCATTT
Protein sequenceShow/hide protein sequence
WNLWRQFIRFVIFLISSLAEDRLPLDLPYVEEELVAGYQIIEYLDIKFGLFYVMYFIYWIIGGAF