; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004051 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004051
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1597:779827..780483
RNA-Seq ExpressionMS004051
SyntenyMS004051
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572935.1 hypothetical protein SDJN03_26822, partial [Cucurbita argyrosperma subsp. sororia]8.3e-5861.97Show/hide
Query:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILED----SERDAAIQGLEL
        ME  TDNRKR R E D S ADS+ SKL R+NS        C          SKSEQ GS  G   IDLA  +EIQD+LL+ILED    +ERD +IQG EL
Subjt:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILED----SERDAAIQGLEL

Query:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT------GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGP
        DSFIRSFEEEI   PP+ E SS +NE+PQAELGYL+EASDDELGLPPT      GK+  EA+ F    S PGVFE+ GN+GF DEIPCYDSFE+GIGIG 
Subjt:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT------GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGP

Query:  NAAEENG----FVPLGGLFDYSDAPFWPESLPAL
         AAEENG    FV LGGLFDYSD PF PESL AL
Subjt:  NAAEENG----FVPLGGLFDYSDAPFWPESLPAL

KAG6584364.1 hypothetical protein SDJN03_20296, partial [Cucurbita argyrosperma subsp. sororia]8.0e-5358.72Show/hide
Query:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL
        ME  TDN+KR+  EFDDS ADS+ESKL R++S        C TK N NV      Q         I+L+   +IQD+LL+ILEDS    ERD +I+GLEL
Subjt:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL

Query:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKMEP-----EAVGFVYPAS---PGVFELGGNLGFGDEIPCYDSFELGIGIG
        DSFIRSFEEEIQ   PSV+  S +NE+PQ ELGYLY ASDDELGLPPTG +       EA+ F+ PAS   PGVFEL GN GF DEIPCYD FE+G+G  
Subjt:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKMEP-----EAVGFVYPAS---PGVFELGGNLGFGDEIPCYDSFELGIGIG

Query:  PNAAEENG----FVPLGGLFDYSDAPFWPESLPAL
          AAEENG    FV LGGLFDYSD PF PESL AL
Subjt:  PNAAEENG----FVPLGGLFDYSDAPFWPESLPAL

XP_022954576.1 uncharacterized protein LOC111456805 [Cucurbita moschata]5.7e-5962.82Show/hide
Query:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL
        ME  TDNRKR R E D S ADS+ESKL R+NS        C          SKSEQ GS  G   IDLA  +EIQD+LL+ILEDS    ERD +IQG EL
Subjt:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL

Query:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT------GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGP
        DSFIRSFEEEI   PP+ E SS +NE+PQAELGYL+EASDDELGLPPT      GK+  EA+ F    S PGVFE+ GN+GF DEIPCYDSFE+GIGIG 
Subjt:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT------GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGP

Query:  NAAEENG----FVPLGGLFDYSDAPFWPESLPAL
         AAEENG    FV LGGLFDYSD PF PESL AL
Subjt:  NAAEENG----FVPLGGLFDYSDAPFWPESLPAL

XP_022994085.1 uncharacterized protein LOC111489916 [Cucurbita maxima]4.6e-5660.78Show/hide
Query:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL
        ME  TDNRKR R + D S ADS+ESKL R+N         C          SKSEQ GS      IDLA  +EI D+LL+ILEDS    ERD  IQG EL
Subjt:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL

Query:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT----GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGPNA
        DSFIRSFEEEI   PP+ E SS +NE+PQAELGYL+EASDDELGLPPT     +   EA+ F    S PGVFE+ GN+GF DEIPCYDSFE+GIGIG  A
Subjt:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT----GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGPNA

Query:  AEENG----FVPLGGLFDYSDAPFWPESLPAL
        AEENG    FV LGGLFDYSD PF PESL AL
Subjt:  AEENG----FVPLGGLFDYSDAPFWPESLPAL

XP_023541956.1 uncharacterized protein LOC111801944 [Cucurbita pepo subsp. pepo]1.3e-5560.68Show/hide
Query:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL
        ME  TDNRKR R E D S ADS+ESKL R++S        C          SKSE  GS      IDLA  +EIQD+LL+ILEDS    ERD +IQG EL
Subjt:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL

Query:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT------GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGP
        DSFIRSFEEEI   PP+ E  S +NE+PQAELGYL+EASDDELGLPPT      GK+  EA+ F    S PGVFE+ GN+GF DEIPCYDSFE+GIGIG 
Subjt:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT------GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGP

Query:  NAAEENG----FVPLGGLFDYSDAPFWPESLPAL
          AEENG    FV LGGLFDYSD PF PESL AL
Subjt:  NAAEENG----FVPLGGLFDYSDAPFWPESLPAL

TrEMBL top hitse value%identityAlignment
A0A0A0LQD5 Uncharacterized protein2.1e-5157.96Show/hide
Query:  MEGFTDNRKRVRGEF-DDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGG--AIIDLAGPEEIQDE-LLDILEDS----ERD-AAI
        M+ F+++RKRV  E  DDS ADS+ESKL R+NS    +   C TK + NV      QG S   G   I DL   EEIQDE LL+ILEDS    ERD +AI
Subjt:  MEGFTDNRKRVRGEF-DDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGG--AIIDLAGPEEIQDE-LLDILEDS----ERD-AAI

Query:  QGLELDSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKM-------EPEAVGFVYPA---SPGVFELGGNLGFGDEIPCYDSF
        +GLELDSFI+SFEEEIQ  P SV+  +  NE+PQAELGYL+ ASDDELGLPP+G +       + EA+ F+ PA   SP VFEL G LGF D+IPCYDSF
Subjt:  QGLELDSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKM-------EPEAVGFVYPA---SPGVFELGGNLGFGDEIPCYDSF

Query:  ELGIGIGPNA--AEENG-----FVPLGGLFDYSDAPFWPESLPAL
        ELG+GIG  A  AE+NG     FV LGGLFDYSD  F PESLPAL
Subjt:  ELGIGIGPNA--AEENG-----FVPLGGLFDYSDAPFWPESLPAL

A0A6J1E811 uncharacterized protein LOC1114315778.7e-5358.3Show/hide
Query:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL
        ME  TDN+KR+  EFDDS ADS+ESKL R++S        C T+ N NV      Q         I+L+   +IQD+LL+ILEDS    ERD +I+GLEL
Subjt:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL

Query:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKM-----EPEAVGFVYPAS---PGVFELGGNLGFGDEIPCYDSFELGIGIG
        DSFIRSFEEEIQ   PSV+  S +NE+PQ ELGYLY ASDDELGLPPTG +       EA+ F+ PAS   PGVFEL GN GF DEIPCYD FE+G+G  
Subjt:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKM-----EPEAVGFVYPAS---PGVFELGGNLGFGDEIPCYDSFELGIGIG

Query:  PNAAEENG----FVPLGGLFDYSDAPFWPESLPAL
          AAEENG    FV LGGLFDYSD PF PESL AL
Subjt:  PNAAEENG----FVPLGGLFDYSDAPFWPESLPAL

A0A6J1GR95 uncharacterized protein LOC1114568052.8e-5962.82Show/hide
Query:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL
        ME  TDNRKR R E D S ADS+ESKL R+NS        C          SKSEQ GS  G   IDLA  +EIQD+LL+ILEDS    ERD +IQG EL
Subjt:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL

Query:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT------GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGP
        DSFIRSFEEEI   PP+ E SS +NE+PQAELGYL+EASDDELGLPPT      GK+  EA+ F    S PGVFE+ GN+GF DEIPCYDSFE+GIGIG 
Subjt:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT------GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGP

Query:  NAAEENG----FVPLGGLFDYSDAPFWPESLPAL
         AAEENG    FV LGGLFDYSD PF PESL AL
Subjt:  NAAEENG----FVPLGGLFDYSDAPFWPESLPAL

A0A6J1K097 uncharacterized protein LOC1114899162.2e-5660.78Show/hide
Query:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL
        ME  TDNRKR R + D S ADS+ESKL R+N         C          SKSEQ GS      IDLA  +EI D+LL+ILEDS    ERD  IQG EL
Subjt:  MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDS----ERDAAIQGLEL

Query:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT----GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGPNA
        DSFIRSFEEEI   PP+ E SS +NE+PQAELGYL+EASDDELGLPPT     +   EA+ F    S PGVFE+ GN+GF DEIPCYDSFE+GIGIG  A
Subjt:  DSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT----GKMEPEAVGFVYPAS-PGVFELGGNLGFGDEIPCYDSFELGIGIGPNA

Query:  AEENG----FVPLGGLFDYSDAPFWPESLPAL
        AEENG    FV LGGLFDYSD PF PESL AL
Subjt:  AEENG----FVPLGGLFDYSDAPFWPESLPAL

A0A6P4A4M5 uncharacterized protein LOC1074188402.4e-2643.16Show/hide
Query:  DNRKRVRGEFDDSPADSSESKLARVNSESR--LLATACTTKA---NCNVNS---SKSEQGGSGAGGAIIDLAGPEEIQDELLDILED----SERDAAIQG
        +N+KR R + +DS  DS ESKL RV+S+    +L  +  T+    N + NS   S +E     +  +++D    ++I D+LLDIL+D    ++RD AIQG
Subjt:  DNRKRVRGEFDDSPADSSESKLARVNSESR--LLATACTTKA---NCNVNS---SKSEQGGSGAGGAIIDLAGPEEIQDELLDILED----SERDAAIQG

Query:  LELDSFIRSFEEEIQ---------PQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT----GKMEPEAVGFVYPASPGVFELGGNLGFGDEIPCYDS
          LDS I+SF EEIQ         P P  +E  S   ES Q  LGYL EASDDELGLPPT     K + EA+ F    S  V  L G LGF DE+P YD 
Subjt:  LELDSFIRSFEEEIQ---------PQPPSVEPSSGENESPQAELGYLYEASDDELGLPPT----GKMEPEAVGFVYPASPGVFELGGNLGFGDEIPCYDS

Query:  FELGIGIGPNAAEENG---FVPLGGLFDYSDAPF
        +  G+G   N    NG   +V L GLFDYSD  F
Subjt:  FELGIGIGPNAAEENG---FVPLGGLFDYSDAPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13360.1 unknown protein3.2e-1533.53Show/hide
Query:  AIIDLAGPEEIQDELLDILEDSERDAAIQGLELDSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKMEP----------EAVG
        A++D    + ++D+L D+L+DS+ +   Q  +LDS ++SFE+E+     +    S      Q +LGYL EASDDELGLPP   + P          E V 
Subjt:  AIIDLAGPEEIQDELLDILEDSERDAAIQGLELDSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKMEP----------EAVG

Query:  FVYPASPGVFELGGNLGFGDEIPCYDSFELGIGIGPNAAEENGFVPLGGLFDYSDAPF-------W-PESLPA
         +  AS     +    GF D +  Y   + G G+G    +   +V + GLF++SD  F       W  ESLPA
Subjt:  FVYPASPGVFELGGNLGFGDEIPCYDSFELGIGIGPNAAEENGFVPLGGLFDYSDAPF-------W-PESLPA

AT1G13360.2 unknown protein5.1e-1331.82Show/hide
Query:  AIIDLAGPEEIQDELLDILEDSERDAAIQGLELDSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKMEP----------EAVG
        A++D    + ++D+L D+L+DS+ +   Q  +LDS ++SFE+E+     +    S      Q +LGYL EASDDELGLPP   + P          E V 
Subjt:  AIIDLAGPEEIQDELLDILEDSERDAAIQGLELDSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKMEP----------EAVG

Query:  FVYPASPGVFELGGNLGFGDEIPCYDSFELGIGIGPNAAEENGFVPLGGLFDYS
         +  AS     +    GF D +  Y   + G G+G    +   +V + G F Y+
Subjt:  FVYPASPGVFELGGNLGFGDEIPCYDSFELGIGIGPNAAEENGFVPLGGLFDYS

AT1G13360.3 unknown protein4.3e-1233.33Show/hide
Query:  AIIDLAGPEEIQDELLDILEDSERDAAIQGLELDSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKMEP----------EAVG
        A++D    + ++D+L D+L+DS+ +   Q  +LDS ++SFE+E+     +    S      Q +LGYL EASDDELGLPP   + P          E V 
Subjt:  AIIDLAGPEEIQDELLDILEDSERDAAIQGLELDSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKMEP----------EAVG

Query:  FVYPASPGVFELGGNLGFGDEIPCYDSFELGIGIG
         +  AS     +    GF D +  Y   + G G+G
Subjt:  FVYPASPGVFELGGNLGFGDEIPCYDSFELGIGIG

AT3G25870.1 unknown protein9.0e-1035.98Show/hide
Query:  IDLAGPE--EIQDELLDILEDSERDAAIQGLELDSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGL-----PPTGKMEP---EAVGFV
        +DL  P+   ++D+L D   DS  D   Q  +LDS ++SFE E+     ++  SSGE    Q +LGYL+EASDDELGL     PP   + P   E V  +
Subjt:  IDLAGPE--EIQDELLDILEDSERDAAIQGLELDSFIRSFEEEIQPQPPSVEPSSGENESPQAELGYLYEASDDELGL-----PPTGKMEP---EAVGFV

Query:  YPASPGVFELGGNLGFGDEIPCYDSFELGIGIGPNAAEENGFVPLGGLFDYSDAPFW-PESLPA
          AS    E+G   GF D +  +   +LG        ++  F    G  D  D   W PE LPA
Subjt:  YPASPGVFELGGNLGFGDEIPCYDSFELGIGIGPNAAEENGFVPLGGLFDYSDAPFW-PESLPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTTTCACCGATAACAGAAAGCGAGTCCGCGGCGAGTTCGACGACTCGCCCGCCGATTCGTCCGAGTCCAAGCTCGCACGAGTTAACTCCGAATCGAGATTATT
GGCTACGGCATGCACCACCAAGGCCAACTGTAATGTTAACTCCTCTAAGTCGGAACAGGGAGGTTCCGGCGCCGGTGGTGCGATTATTGATTTGGCGGGGCCGGAGGAGA
TTCAGGACGAGTTGCTCGATATCCTCGAGGATTCGGAGCGCGACGCGGCTATCCAAGGCCTGGAGCTCGACTCTTTCATCAGAAGCTTCGAGGAGGAGATTCAGCCGCAA
CCGCCGAGTGTTGAACCGTCGTCGGGTGAGAACGAGTCTCCGCAGGCGGAACTCGGATATCTGTACGAGGCGTCGGACGATGAGCTCGGGCTGCCGCCGACGGGGAAGAT
GGAGCCTGAGGCCGTTGGTTTTGTTTACCCTGCTTCTCCTGGTGTGTTCGAGTTGGGGGGGAACTTAGGGTTTGGAGACGAGATACCGTGTTACGACTCGTTCGAGTTGG
GAATCGGCATTGGGCCGAACGCGGCGGAGGAGAATGGGTTCGTACCATTGGGGGGTTTGTTTGATTATTCGGACGCACCGTTTTGGCCGGAGTCTTTGCCGGCTTTG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTTTCACCGATAACAGAAAGCGAGTCCGCGGCGAGTTCGACGACTCGCCCGCCGATTCGTCCGAGTCCAAGCTCGCACGAGTTAACTCCGAATCGAGATTATT
GGCTACGGCATGCACCACCAAGGCCAACTGTAATGTTAACTCCTCTAAGTCGGAACAGGGAGGTTCCGGCGCCGGTGGTGCGATTATTGATTTGGCGGGGCCGGAGGAGA
TTCAGGACGAGTTGCTCGATATCCTCGAGGATTCGGAGCGCGACGCGGCTATCCAAGGCCTGGAGCTCGACTCTTTCATCAGAAGCTTCGAGGAGGAGATTCAGCCGCAA
CCGCCGAGTGTTGAACCGTCGTCGGGTGAGAACGAGTCTCCGCAGGCGGAACTCGGATATCTGTACGAGGCGTCGGACGATGAGCTCGGGCTGCCGCCGACGGGGAAGAT
GGAGCCTGAGGCCGTTGGTTTTGTTTACCCTGCTTCTCCTGGTGTGTTCGAGTTGGGGGGGAACTTAGGGTTTGGAGACGAGATACCGTGTTACGACTCGTTCGAGTTGG
GAATCGGCATTGGGCCGAACGCGGCGGAGGAGAATGGGTTCGTACCATTGGGGGGTTTGTTTGATTATTCGGACGCACCGTTTTGGCCGGAGTCTTTGCCGGCTTTG
Protein sequenceShow/hide protein sequence
MEGFTDNRKRVRGEFDDSPADSSESKLARVNSESRLLATACTTKANCNVNSSKSEQGGSGAGGAIIDLAGPEEIQDELLDILEDSERDAAIQGLELDSFIRSFEEEIQPQ
PPSVEPSSGENESPQAELGYLYEASDDELGLPPTGKMEPEAVGFVYPASPGVFELGGNLGFGDEIPCYDSFELGIGIGPNAAEENGFVPLGGLFDYSDAPFWPESLPAL