; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004100 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004100
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold92:65795..66308
RNA-Seq ExpressionMS004100
SyntenyMS004100
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032048.1 hypothetical protein SDJN02_06090, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-2668.22Show/hide
Query:  FRSPSSWRRRPAADHRRAPRCHSGVSDD--EENQKDIVEANLTVLRERMEDLRKKERRIPASG--GRIEFDNCWSYLSRSDAKLDRDCERKMVKNFALIS
        F +PS WRRRP +DHRRAPRCH GV D+    NQKDIVEANLTVL+ RMEDLRKKERRIP     G +E DN W Y S  DAKLD    RK+VKNFALIS
Subjt:  FRSPSSWRRRPAADHRRAPRCHSGVSDD--EENQKDIVEANLTVLRERMEDLRKKERRIPASG--GRIEFDNCWSYLSRSDAKLDRDCERKMVKNFALIS

Query:  ECLEVIS
         CLEV+S
Subjt:  ECLEVIS

XP_008446686.1 PREDICTED: uncharacterized protein LOC103489333 [Cucumis melo]3.9e-3263.45Show/hide
Query:  ASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIP-----ASGGRIEFDNCWSYLSRSDAKLDRDC-
        ASSA L SFH+  P S R+R  +DH  APRCHS  + DEEN+KDIVEANLTVLR RMEDLRKKERRIP        G  EFD+   YLS   +KLD  C 
Subjt:  ASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIP-----ASGGRIEFDNCWSYLSRSDAKLDRDC-

Query:  ERKMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH
        + K +KN ALIS CLEV+S  GGAVGLV VGGSLGICLVS ++RH
Subjt:  ERKMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH

XP_011655810.1 uncharacterized protein LOC105435587 [Cucumis sativus]3.0e-3263.64Show/hide
Query:  SSAPLCSFH-FRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIP---ASGGRIEFDNCWSYLSRSDAKLDRDC-ER
        +SAPL SFH F +PSS RRRP +DHR APRCH G + DEEN+KDIVEANLTVLR RMEDLRKKER IP      G  E D+   YL     KLD  C + 
Subjt:  SSAPLCSFH-FRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIP---ASGGRIEFDNCWSYLSRSDAKLDRDC-ER

Query:  KMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH
        K +KN  LIS CLEV+S  GGAVGLV VGGSLGIC VS ++RH
Subjt:  KMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH

XP_022150638.1 uncharacterized protein LOC111018723 [Momordica charantia]8.5e-7299.3Show/hide
Query:  TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIPASGGRIEFDNCWSYLSRSDAKLDRDCERKMV
        TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIPASGGRIEFDNCWSY+SRSDAKLDRDCERKMV
Subjt:  TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIPASGGRIEFDNCWSYLSRSDAKLDRDCERKMV

Query:  KNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRHLS
        KNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRHLS
Subjt:  KNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRHLS

XP_038893300.1 uncharacterized protein LOC120082131 isoform X1 [Benincasa hispida]6.0e-4170.92Show/hide
Query:  SSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRI--PASGGRIEFDNCWSYLSRSD-AKLDRDCERKM
        +SA   SFHF SP S RRRP +DHRRAPRCH GV  DEENQKDIV+ANLTVLR RMEDLRKKERRI  PA  G +EFDN W YLS SD AK DR  + K+
Subjt:  SSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRI--PASGGRIEFDNCWSYLSRSD-AKLDRDCERKM

Query:  VKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH
        +K FALI+ CLEV++  GGAVGLV VGGSLGICLV+LL+RH
Subjt:  VKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH

TrEMBL top hitse value%identityAlignment
A0A0A0KRA6 Uncharacterized protein1.4e-3263.64Show/hide
Query:  SSAPLCSFH-FRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIP---ASGGRIEFDNCWSYLSRSDAKLDRDC-ER
        +SAPL SFH F +PSS RRRP +DHR APRCH G + DEEN+KDIVEANLTVLR RMEDLRKKER IP      G  E D+   YL     KLD  C + 
Subjt:  SSAPLCSFH-FRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIP---ASGGRIEFDNCWSYLSRSDAKLDRDC-ER

Query:  KMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH
        K +KN  LIS CLEV+S  GGAVGLV VGGSLGIC VS ++RH
Subjt:  KMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH

A0A1Q3D7T7 Uncharacterized protein1.6e-0739.82Show/hide
Query:  PRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKER----RIPASGGRIEFDNCWSYLSRSDAKLDRDCERKMVKNFALISECLEVISMAGGAVGLVLV
        P+  S    DE N  +IV+ANL+ L ER+ ++RKKE     R+    G+++  N W+Y S  D    RD         A++SE +E+I    GA+G+V++
Subjt:  PRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKER----RIPASGGRIEFDNCWSYLSRSDAKLDRDCERKMVKNFALISECLEVISMAGGAVGLVLV

Query:  GGSLGICLVSLLI
         GSL ICLVSLL+
Subjt:  GGSLGICLVSLLI

A0A1S3BFP0 uncharacterized protein LOC1034893331.9e-3263.45Show/hide
Query:  ASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIP-----ASGGRIEFDNCWSYLSRSDAKLDRDC-
        ASSA L SFH+  P S R+R  +DH  APRCHS  + DEEN+KDIVEANLTVLR RMEDLRKKERRIP        G  EFD+   YLS   +KLD  C 
Subjt:  ASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIP-----ASGGRIEFDNCWSYLSRSDAKLDRDC-

Query:  ERKMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH
        + K +KN ALIS CLEV+S  GGAVGLV VGGSLGICLVS ++RH
Subjt:  ERKMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH

A0A5A7SXL4 Uncharacterized protein1.9e-3263.45Show/hide
Query:  ASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIP-----ASGGRIEFDNCWSYLSRSDAKLDRDC-
        ASSA L SFH+  P S R+R  +DH  APRCHS  + DEEN+KDIVEANLTVLR RMEDLRKKERRIP        G  EFD+   YLS   +KLD  C 
Subjt:  ASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIP-----ASGGRIEFDNCWSYLSRSDAKLDRDC-

Query:  ERKMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH
        + K +KN ALIS CLEV+S  GGAVGLV VGGSLGICLVS ++RH
Subjt:  ERKMVKNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRH

A0A6J1D9Z1 uncharacterized protein LOC1110187234.1e-7299.3Show/hide
Query:  TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIPASGGRIEFDNCWSYLSRSDAKLDRDCERKMV
        TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIPASGGRIEFDNCWSY+SRSDAKLDRDCERKMV
Subjt:  TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIPASGGRIEFDNCWSYLSRSDAKLDRDCERKMV

Query:  KNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRHLS
        KNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRHLS
Subjt:  KNFALISECLEVISMAGGAVGLVLVGGSLGICLVSLLIRHLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGGCTTCTTCTGCTCCTCTCTGCTCCTTCCATTTCCGCAGTCCGTCTTCTTGGCGGCGAAGGCCAGCGGCGGACCACCGCAGAGCGCCGAGATGCCACAGCGGCGTCAG
CGACGATGAAGAAAACCAGAAGGACATCGTGGAGGCGAACTTGACGGTGTTGAGAGAGAGAATGGAGGATTTGAGGAAGAAGGAGCGGCGGATTCCGGCGAGTGGCGGAA
GAATCGAATTCGATAATTGCTGGAGCTACCTGTCGAGGAGCGATGCGAAATTGGATCGCGATTGTGAGCGGAAGATGGTGAAGAATTTTGCCCTAATTTCAGAGTGCTTG
GAGGTGATTTCTATGGCTGGTGGTGCAGTTGGACTCGTTCTTGTTGGTGGATCTTTAGGCATCTGTTTGGTTTCTCTCCTGATTCGTCATCTAAGT
mRNA sequenceShow/hide mRNA sequence
ACGGCTTCTTCTGCTCCTCTCTGCTCCTTCCATTTCCGCAGTCCGTCTTCTTGGCGGCGAAGGCCAGCGGCGGACCACCGCAGAGCGCCGAGATGCCACAGCGGCGTCAG
CGACGATGAAGAAAACCAGAAGGACATCGTGGAGGCGAACTTGACGGTGTTGAGAGAGAGAATGGAGGATTTGAGGAAGAAGGAGCGGCGGATTCCGGCGAGTGGCGGAA
GAATCGAATTCGATAATTGCTGGAGCTACCTGTCGAGGAGCGATGCGAAATTGGATCGCGATTGTGAGCGGAAGATGGTGAAGAATTTTGCCCTAATTTCAGAGTGCTTG
GAGGTGATTTCTATGGCTGGTGGTGCAGTTGGACTCGTTCTTGTTGGTGGATCTTTAGGCATCTGTTTGGTTTCTCTCCTGATTCGTCATCTAAGT
Protein sequenceShow/hide protein sequence
TASSAPLCSFHFRSPSSWRRRPAADHRRAPRCHSGVSDDEENQKDIVEANLTVLRERMEDLRKKERRIPASGGRIEFDNCWSYLSRSDAKLDRDCERKMVKNFALISECL
EVISMAGGAVGLVLVGGSLGICLVSLLIRHLS