CuGenDBv2

Gene ID	MS004139
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ER lumen protein retaining receptor family protein
Genome location	scaffold92:293538..293668
RNA-Seq Expression	MS004139
Synteny	MS004139
Gene Ontology terms	GO:0006621 - protein retention in ER lumen (biological process) GO:0015031 - protein transport (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046923 - ER retention sequence binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0065166.1 putative ER lumen protein-retaining receptor C28H8.4 [Cucumis melo var. makuwa]

2.1e-05

77.78

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Query:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        W+LQMVATR GLLVALGTG    + LLAE VQT VLADFCYYYVK
Subjt:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

XP_004152650.1 ER lumen protein-retaining receptor erd-2.2 [Cucumis sativus]

2.1e-05

77.78

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Query:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        W+LQMVATR GLLVALGTG    + LLAE VQT VLADFCYYYVK
Subjt:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

XP_008444804.1 PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Cucumis melo]

2.1e-05

77.78

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Query:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        W+LQMVATR GLLVALGTG    + LLAE VQT VLADFCYYYVK
Subjt:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

XP_022961664.1 putative ER lumen protein-retaining receptor C28H8.4 [Cucurbita moschata]

3.6e-05

77.78

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Query:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        WVLQMVATR GLLV+LGTG    + LLAE VQT VLADFCYYYVK
Subjt:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

XP_038886586.1 ER lumen protein-retaining receptor erd-2.2-like [Benincasa hispida]

2.7e-05

77.78

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Query:  WVLQMVATRG-LLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        WVLQMVATRG +LVALGTG    + LLAE VQT VLADFCYYYVK
Subjt:  WVLQMVATRG-LLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LRN5 ER lumen protein retaining receptor family protein

1.0e-05

77.78

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Query:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        W+LQMVATR GLLVALGTG    + LLAE VQT VLADFCYYYVK
Subjt:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

A0A1S3BAQ8 putative ER lumen protein-retaining receptor C28H8.4

1.0e-05

77.78

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Query:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        W+LQMVATR GLLVALGTG    + LLAE VQT VLADFCYYYVK
Subjt:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

A0A5A7VFR1 Putative ER lumen protein-retaining receptor C28H8.4

1.0e-05

77.78

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Query:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        W+LQMVATR GLLVALGTG    + LLAE VQT VLADFCYYYVK
Subjt:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

A0A6J1HEP4 putative ER lumen protein-retaining receptor C28H8.4

1.7e-05

77.78

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Query:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        WVLQMVATR GLLV+LGTG    + LLAE VQT VLADFCYYYVK
Subjt:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

A0A6J1KCJ9 putative ER lumen protein-retaining receptor C28H8.4

1.7e-05

77.78

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Query:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        WVLQMVATR GLLV+LGTG    + LLAE VQT VLADFCYYYVK
Subjt:  WVLQMVATR-GLLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G19970.1 ER lumen protein retaining receptor family protein

9.0e-07

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Query:  WVLQMVATRG-LLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        W+LQ++ TRG LL ALG+GL  ++ L++E VQT +LADFCYYYV+
Subjt:  WVLQMVATRG-LLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

AT1G75760.1 ER lumen protein retaining receptor family protein

6.9e-07

64.44

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Query:  WVLQMVATRG-LLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        WVLQ++ TRG LL ALG G   ++ LL+E VQT +LADFCYYYVK
Subjt:  WVLQMVATRG-LLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

AT2G21190.1 ER lumen protein retaining receptor family protein

2.6e-06

62.22

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Query:  WVLQMVATRG-LLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        WVLQM+ T G LLV LG GL   + +++E VQT +LADFCYYYVK
Subjt:  WVLQMVATRG-LLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

AT3G25160.1 ER lumen protein retaining receptor family protein

7.2e-04

58.7

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Query:  WVLQMVATRG-LLVALGTGLCSL-LFLLAE-VQTIVLADFCYYYVK
        W++Q+V TRG  L  LG G     + LLAE VQT +LADFCYYYVK
Subjt:  WVLQMVATRG-LLVALGTGLCSL-LFLLAE-VQTIVLADFCYYYVK

AT4G38790.1 ER lumen protein retaining receptor family protein

1.8e-07

68.89

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Query:  WVLQMVATRG-LLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK
        WVLQ+V TRG LLVALG GL   + L++E VQT +LADFCYYYVK
Subjt:  WVLQMVATRG-LLVALGTGLCSLLFLLAE-VQTIVLADFCYYYVK

Sequences

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CDS sequence

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TGGGTTCTTCAAATGGTAGCAACTCGTGGGCTGCTAGTGGCATTGGGGACGGGATTATGTTCACTTTTGTTTCTTTTGGCAGAAGTCCAAACCATTGTTCTGGCAGATTT
CTGTTATTACTATGTCAAA

mRNA sequence

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TGGGTTCTTCAAATGGTAGCAACTCGTGGGCTGCTAGTGGCATTGGGGACGGGATTATGTTCACTTTTGTTTCTTTTGGCAGAAGTCCAAACCATTGTTCTGGCAGATTT
CTGTTATTACTATGTCAAA

Protein sequence

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WVLQMVATRGLLVALGTGLCSLLFLLAEVQTIVLADFCYYYVK

MS004139 (gene) of Bitter gourd (TR) v1 genome