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MS004143 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004143
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear transport factor 2 (NTF2) family protein
Genome locationscaffold92:312711..314458
RNA-Seq ExpressionMS004143
SyntenyMS004143
Gene Ontology termsNA
InterPro domainsIPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK09197.1 Nuclear transport factor 2 family protein [Cucumis melo var. makuwa]9.6e-8486.26Show/hide
Query:  MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP
        MPGD EI AD ++EAC K ACD KTTKRLADDIMP+ILNLY SSATPRDFEIYAP+ASF+DPLT A+GVKEIKSAFYSLSKVFSESRIVEY+ KE+LISP
Subjt:  MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP

Query:  GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        GKHEIIVDNKQ+YKFLGR+IDLESLIKLYVVEGK+VRHEDWWNKKPLLNRETV+ PMVGR LEMTRR  MLATHAMMGFGKD
Subjt:  GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD

XP_004135041.1 uncharacterized protein LOC101206496 isoform X2 [Cucumis sativus]6.0e-8687.43Show/hide
Query:  KMPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLIS
        KMPG  EI AD ++EAC K ACD KTTKRLADDIMP+ILNLY SSATPRDFEIYAP+ASFEDPLT AHGVKEIKSAFYSLSKVFSESRIVEYN  E+LIS
Subjt:  KMPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLIS

Query:  PGKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        PGKHEI VDNKQ+YKFLGR+IDLESLIKLYVVEGK+VRHEDWWNKKPLLNRETV+ PMVGR LEMTRRCAMLATHAMMGFGKD
Subjt:  PGKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD

XP_008446746.1 PREDICTED: uncharacterized protein LOC103489375 isoform X2 [Cucumis melo]2.5e-8486.34Show/hide
Query:  KMPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLIS
        KMPGD EI AD ++EAC K ACD KTTKRLADDIMP+ILNLY SSATPRDFEIYAP+ASF+DPLT A+GVKEIKSAFYSLSKVFSESRIVEY+ KE+LIS
Subjt:  KMPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLIS

Query:  PGKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        PGKHEIIVDNKQ+YKFLGR+IDLESLIKLYVVEGK+VRHEDWWNKKPLLNRETV+ PMVGR LEMTRR  MLATHAMMGFGKD
Subjt:  PGKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD

XP_011655829.1 uncharacterized protein LOC101206496 isoform X1 [Cucumis sativus]9.6e-8483.77Show/hide
Query:  KMPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHG--------VKEIKSAFYSLSKVFSESRIVEY
        KMPG  EI AD ++EAC K ACD KTTKRLADDIMP+ILNLY SSATPRDFEIYAP+ASFEDPLT AHG        VKEIKSAFYSLSKVFSESRIVEY
Subjt:  KMPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHG--------VKEIKSAFYSLSKVFSESRIVEY

Query:  NVKEKLISPGKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        N  E+LISPGKHEI VDNKQ+YKFLGR+IDLESLIKLYVVEGK+VRHEDWWNKKPLLNRETV+ PMVGR LEMTRRCAMLATHAMMGFGKD
Subjt:  NVKEKLISPGKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD

XP_022150478.1 uncharacterized protein LOC111018615 [Momordica charantia]1.6e-99100Show/hide
Query:  MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP
        MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP
Subjt:  MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP

Query:  GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
Subjt:  GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD

TrEMBL top hitse value%identityAlignment
A0A0A0KUR1 Uncharacterized protein2.9e-8687.43Show/hide
Query:  KMPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLIS
        KMPG  EI AD ++EAC K ACD KTTKRLADDIMP+ILNLY SSATPRDFEIYAP+ASFEDPLT AHGVKEIKSAFYSLSKVFSESRIVEYN  E+LIS
Subjt:  KMPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLIS

Query:  PGKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        PGKHEI VDNKQ+YKFLGR+IDLESLIKLYVVEGK+VRHEDWWNKKPLLNRETV+ PMVGR LEMTRRCAMLATHAMMGFGKD
Subjt:  PGKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD

A0A1S3BFU1 uncharacterized protein LOC103489375 isoform X21.2e-8486.34Show/hide
Query:  KMPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLIS
        KMPGD EI AD ++EAC K ACD KTTKRLADDIMP+ILNLY SSATPRDFEIYAP+ASF+DPLT A+GVKEIKSAFYSLSKVFSESRIVEY+ KE+LIS
Subjt:  KMPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLIS

Query:  PGKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        PGKHEIIVDNKQ+YKFLGR+IDLESLIKLYVVEGK+VRHEDWWNKKPLLNRETV+ PMVGR LEMTRR  MLATHAMMGFGKD
Subjt:  PGKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD

A0A5D3CB20 Nuclear transport factor 2 family protein4.6e-8486.26Show/hide
Query:  MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP
        MPGD EI AD ++EAC K ACD KTTKRLADDIMP+ILNLY SSATPRDFEIYAP+ASF+DPLT A+GVKEIKSAFYSLSKVFSESRIVEY+ KE+LISP
Subjt:  MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP

Query:  GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        GKHEIIVDNKQ+YKFLGR+IDLESLIKLYVVEGK+VRHEDWWNKKPLLNRETV+ PMVGR LEMTRR  MLATHAMMGFGKD
Subjt:  GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD

A0A6J1D9K1 uncharacterized protein LOC1110186157.9e-100100Show/hide
Query:  MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP
        MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP
Subjt:  MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP

Query:  GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
Subjt:  GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD

A0A6J1JHF8 uncharacterized protein LOC1114843823.9e-8386.26Show/hide
Query:  MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP
        MPGD EI  D  +EA  K ACD K TKR ADDIMP+ILNLY SSATPRDFEIYA +ASFEDPLT AHGVKEIKSAFYSLSKVFSESRIVEY+VKEKLISP
Subjt:  MPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISP

Query:  GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        GKHEI VDNKQ+YKFLGR+IDLESLIKLYV+EGKV+RHEDWWNKKPLLNRETVK PMVGRVLEMTRRCAMLATHAMM FGKD
Subjt:  GKHEIIVDNKQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G04830.1 Nuclear transport factor 2 (NTF2) family protein2.3e-6769.36Show/hide
Query:  DESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDN
        D + E   KGAC+ K+ KR AD IMP++LNLY SSA   DF++YAPNASFEDPLT A GVK+IKSAFYSL KVF ES+IVEY+++E   SPGK EI++DN
Subjt:  DESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDN

Query:  KQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        KQ+YK +GR+ID+ SLIKLYV +GK+VRHEDWW+KKPL NR+TV FP+VGRV+EM RR  MLATHAMMGFGKD
Subjt:  KQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD

AT5G04830.2 Nuclear transport factor 2 (NTF2) family protein2.3e-6769.36Show/hide
Query:  DESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDN
        D + E   KGAC+ K+ KR AD IMP++LNLY SSA   DF++YAPNASFEDPLT A GVK+IKSAFYSL KVF ES+IVEY+++E   SPGK EI++DN
Subjt:  DESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDN

Query:  KQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD
        KQ+YK +GR+ID+ SLIKLYV +GK+VRHEDWW+KKPL NR+TV FP+VGRV+EM RR  MLATHAMMGFGKD
Subjt:  KQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAATGCCGGGAGATTCAGAAATCGAAGCGGATGAATCGATGGAAGCCTGCTGCAAGGGGGCCTGCGATTTCAAAACGACGAAGCGTCTCGCGGATGATATCATGCCGTA
CATCCTCAATCTGTATAGATCTTCCGCTACGCCTCGGGATTTCGAAATCTACGCTCCTAATGCTTCTTTTGAGGATCCACTCACGAGTGCTCACGGAGTGAAGGAAATCA
AATCGGCGTTTTATTCTCTGTCCAAGGTCTTTAGTGAATCAAGAATTGTGGAATACAATGTCAAAGAAAAACTCATTTCACCTGGAAAGCACGAGATTATAGTTGACAAT
AAGCAATACTACAAGTTCTTGGGGAGAGACATAGATTTGGAATCACTTATCAAGTTATATGTTGTTGAAGGAAAAGTTGTGCGTCATGAGGACTGGTGGAACAAGAAGCC
ACTTTTGAATAGGGAAACTGTCAAGTTTCCAATGGTTGGTCGAGTTTTGGAAATGACTCGCAGATGTGCGATGTTAGCAACTCATGCAATGATGGGATTTGGAAAAGAT
mRNA sequenceShow/hide mRNA sequence
AAAATGCCGGGAGATTCAGAAATCGAAGCGGATGAATCGATGGAAGCCTGCTGCAAGGGGGCCTGCGATTTCAAAACGACGAAGCGTCTCGCGGATGATATCATGCCGTA
CATCCTCAATCTGTATAGATCTTCCGCTACGCCTCGGGATTTCGAAATCTACGCTCCTAATGCTTCTTTTGAGGATCCACTCACGAGTGCTCACGGAGTGAAGGAAATCA
AATCGGCGTTTTATTCTCTGTCCAAGGTCTTTAGTGAATCAAGAATTGTGGAATACAATGTCAAAGAAAAACTCATTTCACCTGGAAAGCACGAGATTATAGTTGACAAT
AAGCAATACTACAAGTTCTTGGGGAGAGACATAGATTTGGAATCACTTATCAAGTTATATGTTGTTGAAGGAAAAGTTGTGCGTCATGAGGACTGGTGGAACAAGAAGCC
ACTTTTGAATAGGGAAACTGTCAAGTTTCCAATGGTTGGTCGAGTTTTGGAAATGACTCGCAGATGTGCGATGTTAGCAACTCATGCAATGATGGGATTTGGAAAAGAT
Protein sequenceShow/hide protein sequence
KMPGDSEIEADESMEACCKGACDFKTTKRLADDIMPYILNLYRSSATPRDFEIYAPNASFEDPLTSAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDN
KQYYKFLGRDIDLESLIKLYVVEGKVVRHEDWWNKKPLLNRETVKFPMVGRVLEMTRRCAMLATHAMMGFGKD