; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004150 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004150
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF2996 family protein
Genome locationscaffold92:349311..352137
RNA-Seq ExpressionMS004150
SyntenyMS004150
Gene Ontology termsNA
InterPro domainsIPR021374 - Protein of unknown function DUF2996


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601225.1 Replication protein A 14 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia]1.3e-8687.83Show/hide
Query:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA
        MAMILKGGGGIGV TAT F Q SKPSP+FS+HT++KL AER+VICCSTLQESSTPTV+AEPKEIK V+KEAPAK KPPAKAPVK LP++MEEDVIPSLKA
Subjt:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA

Query:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIP
        ILEAQADV+DIELSFQDDRLDGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYG GGSSVEPFLVDEKK+TAK +VFWIEKRLAAQGIIP
Subjt:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIP

XP_022150480.1 uncharacterized protein LOC111018617 [Momordica charantia]1.4e-10199.48Show/hide
Query:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA
        MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKE+KVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA
Subjt:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA

Query:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD
        ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD
Subjt:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD

XP_022956513.1 uncharacterized protein LOC111458230 [Cucurbita moschata]1.2e-8988.08Show/hide
Query:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA
        MAMILKGGGGIGV TAT F Q SKPSP+FS+HT++KL AER+VICCSTLQESSTPTV+AEPKEIK V+KEAPAK KPPAKAPVK LP++MEEDVIPSLKA
Subjt:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA

Query:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD
        ILEAQADV+DIELSFQDDRLDGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYG GGSSVEPFLVDEKK+TAK +VFWIEKRLAAQGIIPVWKD
Subjt:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD

XP_022986445.1 uncharacterized protein LOC111484155 [Cucurbita maxima]1.2e-8988.08Show/hide
Query:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA
        MAMILKGGGGIGV TAT F Q SKPSP+FS+HT++KL AER+VICCSTLQESSTPTV+AEPKEIK V+KEAPAK KPPAKAPVK LP++MEEDVIPSLKA
Subjt:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA

Query:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD
        ILEAQADV+DIELSFQDDRLDGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYG GGSSVEPFLVDEKK+TAK +VFWIEKRLAAQGIIPVWKD
Subjt:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD

XP_038891519.1 uncharacterized protein LOC120080914 isoform X1 [Benincasa hispida]4.4e-8787.63Show/hide
Query:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHT-IYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLK
        MAMILKGG GIGV TAT F   SKPSP+FS+HT ++KLAAERKV+CCSTLQESSTPTVAAEPKEIK V KEAPAK KPPAKAPVK LPELMEEDVIPSLK
Subjt:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHT-IYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLK

Query:  AILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD
        AILEAQADVSDI LSFQD+RLDGSFLKNGVPY+FWAFFPNGLTGPKGFSLSSYG GGSSVEPFLVDEKK+TAK +VFWIEKRLAAQGIIPVWK+
Subjt:  AILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD

TrEMBL top hitse value%identityAlignment
A0A0A0KUS0 Uncharacterized protein6.8e-8686.08Show/hide
Query:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIH-TIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLK
        MAMILKGG GIGV TAT F    KPSP+FS+H  ++KLAAERKVICCSTLQESSTPTVAAEPKEIK V KEAPAK KPPAKAPVK LPELM+E+VIPSLK
Subjt:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIH-TIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLK

Query:  AILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD
        AILEAQADVSD+ LSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYG GGSSVEPFLVDEKK++ K +VFWIEKRLAAQGIIPVWKD
Subjt:  AILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD

A0A5A7SZ21 DUF2996 family protein6.4e-8485.64Show/hide
Query:  MAMILKGGGGIGVPTATCF-SQISKPSPIFSIH-TIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSL
        MAMILKGG G+GV TAT F +   KPSP+FS+H  ++KLAAERKVICCSTLQESSTPTVAAEPKEIK V KEAPAK KPPAKA VK LPELMEE+VIPSL
Subjt:  MAMILKGGGGIGVPTATCF-SQISKPSPIFSIH-TIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSL

Query:  KAILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD
        KAILEAQADV DIELSFQDDRLDGSFLK+GVPYSFWAFFPNGLTGPKGFSLSSYG GGSSVEPFLVDEKK++AK +VFWIEKRLAAQGIIPVWKD
Subjt:  KAILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD

A0A6J1D8K8 uncharacterized protein LOC1110186176.8e-10299.48Show/hide
Query:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA
        MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKE+KVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA
Subjt:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA

Query:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD
        ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD
Subjt:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD

A0A6J1GX25 uncharacterized protein LOC1114582306.0e-9088.08Show/hide
Query:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA
        MAMILKGGGGIGV TAT F Q SKPSP+FS+HT++KL AER+VICCSTLQESSTPTV+AEPKEIK V+KEAPAK KPPAKAPVK LP++MEEDVIPSLKA
Subjt:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA

Query:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD
        ILEAQADV+DIELSFQDDRLDGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYG GGSSVEPFLVDEKK+TAK +VFWIEKRLAAQGIIPVWKD
Subjt:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD

A0A6J1JE31 uncharacterized protein LOC1114841556.0e-9088.08Show/hide
Query:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA
        MAMILKGGGGIGV TAT F Q SKPSP+FS+HT++KL AER+VICCSTLQESSTPTV+AEPKEIK V+KEAPAK KPPAKAPVK LP++MEEDVIPSLKA
Subjt:  MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKA

Query:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD
        ILEAQADV+DIELSFQDDRLDGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYG GGSSVEPFLVDEKK+TAK +VFWIEKRLAAQGIIPVWKD
Subjt:  ILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04039.1 unknown protein1.8e-4656.35Show/hide
Query:  GGGIGVPTATCFSQISKPSPIFSIH------TIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPA----KTKPPAKAPVKALP--ELMEEDVI
        GG  GVP+    S+IS  +P  S        T+     +  ++ C+ LQESST  VA E K  +  E+   A    K KP AKA   A P  ++MEEDVI
Subjt:  GGGIGVPTATCFSQISKPSPIFSIH------TIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPA----KTKPPAKAPVKALP--ELMEEDVI

Query:  PSLKAILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVW
        P L+AILE+Q D+SDI+LSFQDD+L+G FLK  +PYSFWAFFP G LTG KGFS+SS+G G S+VEPFLVDE+K TA HVVFW+EKRLAAQGIIPVW
Subjt:  PSLKAILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVW

AT2G04039.2 unknown protein2.7e-4265.49Show/hide
Query:  VAAEPKEIKVVEKEAPA----KTKPPAKAPVKALP--ELMEEDVIPSLKAILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSL
        VA E K  +  E+   A    K KP AKA   A P  ++MEEDVIP L+AILE+Q D+SDI+LSFQDD+L+G FLK  +PYSFWAFFP G LTG KGFS+
Subjt:  VAAEPKEIKVVEKEAPA----KTKPPAKAPVKALP--ELMEEDVIPSLKAILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSL

Query:  SSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVW
        SS+G G S+VEPFLVDE+K TA HVVFW+EKRLAAQGIIPVW
Subjt:  SSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVW

AT2G04039.3 unknown protein1.4e-2248.99Show/hide
Query:  GGGIGVPTATCFSQISKPSPIFSIH------TIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPA----KTKPPAKAPVKALP--ELMEEDVI
        GG  GVP+    S+IS  +P  S        T+     +  ++ C+ LQESST  VA E K  +  E+   A    K KP AKA   A P  ++MEEDVI
Subjt:  GGGIGVPTATCFSQISKPSPIFSIH------TIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPA----KTKPPAKAPVKALP--ELMEEDVI

Query:  PSLKAILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTG
        P L+AILE+Q D+SDI+LSFQDD+L+G FLK  +PYSFWAFFP G LTG
Subjt:  PSLKAILEAQADVSDIELSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGATTCTCAAAGGAGGAGGCGGAATTGGAGTTCCAACTGCTACGTGTTTTTCTCAGATTTCCAAACCTTCCCCAATTTTCTCCATTCACACGATATATAAGCT
TGCAGCTGAACGCAAAGTCATATGCTGCTCTACTTTGCAGGAATCATCTACTCCAACAGTTGCTGCTGAGCCGAAGGAGATAAAAGTGGTCGAGAAGGAAGCTCCAGCAA
AGACCAAACCGCCAGCAAAAGCGCCAGTCAAGGCACTGCCGGAGTTAATGGAGGAGGATGTCATACCTTCACTGAAAGCGATACTCGAAGCACAGGCTGATGTCTCCGAT
ATCGAGCTATCGTTCCAAGACGACAGATTGGATGGCTCGTTCTTGAAAAATGGAGTTCCCTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGGTT
TTCACTATCTTCATATGGCTATGGAGGAAGCTCTGTTGAGCCATTTCTGGTTGATGAGAAGAAAATTACAGCAAAACATGTAGTCTTTTGGATTGAGAAGCGTTTGGCTG
CTCAAGGAATTATTCCAGTCTGGAAAGAC
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGATTCTCAAAGGAGGAGGCGGAATTGGAGTTCCAACTGCTACGTGTTTTTCTCAGATTTCCAAACCTTCCCCAATTTTCTCCATTCACACGATATATAAGCT
TGCAGCTGAACGCAAAGTCATATGCTGCTCTACTTTGCAGGAATCATCTACTCCAACAGTTGCTGCTGAGCCGAAGGAGATAAAAGTGGTCGAGAAGGAAGCTCCAGCAA
AGACCAAACCGCCAGCAAAAGCGCCAGTCAAGGCACTGCCGGAGTTAATGGAGGAGGATGTCATACCTTCACTGAAAGCGATACTCGAAGCACAGGCTGATGTCTCCGAT
ATCGAGCTATCGTTCCAAGACGACAGATTGGATGGCTCGTTCTTGAAAAATGGAGTTCCCTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGGTT
TTCACTATCTTCATATGGCTATGGAGGAAGCTCTGTTGAGCCATTTCTGGTTGATGAGAAGAAAATTACAGCAAAACATGTAGTCTTTTGGATTGAGAAGCGTTTGGCTG
CTCAAGGAATTATTCCAGTCTGGAAAGAC
Protein sequenceShow/hide protein sequence
MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAEPKEIKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKAILEAQADVSD
IELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEKRLAAQGIIPVWKD