; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004151 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004151
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description40S ribosomal protein S25
Genome locationscaffold92:353445..354933
RNA-Seq ExpressionMS004151
SyntenyMS004151
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR004977 - Ribosomal protein S25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573888.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4196.91Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVS+H+SQEIYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

XP_016900931.1 PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]6.3e-4298.97Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

XP_022150617.1 40S ribosomal protein S25-2-like [Momordica charantia]2.8e-42100Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

XP_022945101.1 40S ribosomal protein S25-2-like [Cucurbita moschata]3.1e-4196.91Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVS+H+SQEIYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

XP_022961406.1 40S ribosomal protein S25-2-like [Cucurbita moschata]1.8e-4197.94Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAH SQEIYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

TrEMBL top hitse value%identityAlignment
A0A1S4DY71 40S ribosomal protein S253.0e-4298.97Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

A0A5D3CG38 40S ribosomal protein S253.0e-4298.97Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

A0A6J1DB76 40S ribosomal protein S251.4e-42100Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

A0A6J1HAA0 40S ribosomal protein S258.9e-4297.94Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAH SQEIYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

A0A6J1HUK6 40S ribosomal protein S258.9e-4297.94Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAH SQEIYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

SwissProt top hitse value%identityAlignment
P46301 40S ribosomal protein S256.1e-4087.63Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLL E PKYKL+TPS+LSDRLRI+GSLAR+AI+DLMARG IRMVSAHASQ+IYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

Q8GYL5 40S ribosomal protein S25-38.8e-3986.46Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATN
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL+TPSILSDRLRINGSLARRAI++LMA+G IRMVSAH+SQ+IYTRAT+
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATN

Q9SIK2 40S ribosomal protein S25-23.2e-4188.66Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL+TPSILSDR+RINGSLARRAI++LMA+GLIRMVSAH+SQ+IYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

Q9SIW5 40S ribosomal protein S25-11.4e-3683.16Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRAT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+ E PK+KL+TPSILSDRLRINGSLAR+AI+DLM +G IRMVS H+SQ+I TRAT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRAT

Q9T029 40S ribosomal protein S25-48.0e-4085.57Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL+TPSILSDR+RINGSLARRAI++LMA+G+IRMV+AH+SQ+IYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

Arabidopsis top hitse value%identityAlignment
AT2G21580.1 Ribosomal protein S25 family protein2.3e-4288.66Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL+TPSILSDR+RINGSLARRAI++LMA+GLIRMVSAH+SQ+IYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

AT2G21580.2 Ribosomal protein S25 family protein1.3e-4087.63Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL+TPSILSDR+RINGSLARRAI++LMA+GLIRMVSAH+SQ+IYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

AT4G34555.1 Ribosomal protein S25 family protein6.3e-4086.46Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATN
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL+TPSILSDRLRINGSLARRAI++LMA+G IRMVSAH+SQ+IYTRAT+
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATN

AT4G39200.1 Ribosomal protein S25 family protein5.7e-4185.57Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL+TPSILSDR+RINGSLARRAI++LMA+G+IRMV+AH+SQ+IYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

AT4G39200.2 Ribosomal protein S25 family protein3.1e-3984.54Show/hide
Query:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
        +SKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL+TPSILSDR+RINGSLARRAI++LMA+G+IRMV+AH+SQ+IYTRATNT
Subjt:  ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCTCGAAACCTGCTAAATCTGGCGGAGGGAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTATTCGACCAAGGAACTTA
TGACAAGCTTCTCGTAGAAGTTCCCAAGTACAAGCTTGTCACTCCTTCAATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTAGCACGAAGAGCCATCAAGGATTTGA
TGGCCAGAGGTCTCATCAGAATGGTGTCTGCTCATGCCAGCCAGGAGATCTACACAAGGGCCACCAATACC
mRNA sequenceShow/hide mRNA sequence
GCCTCGAAACCTGCTAAATCTGGCGGAGGGAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTATTCGACCAAGGAACTTA
TGACAAGCTTCTCGTAGAAGTTCCCAAGTACAAGCTTGTCACTCCTTCAATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTAGCACGAAGAGCCATCAAGGATTTGA
TGGCCAGAGGTCTCATCAGAATGGTGTCTGCTCATGCCAGCCAGGAGATCTACACAAGGGCCACCAATACC
Protein sequenceShow/hide protein sequence
ASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT