; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004160 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004160
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncopper transport protein ATX1
Genome locationscaffold92:423497..424257
RNA-Seq ExpressionMS004160
SyntenyMS004160
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648832.1 hypothetical protein Csa_008416 [Cucumis sativus]3.6e-2982.8Show/hide
Query:  TTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAA
        TTVLKVAMSCQGCVGAVKRVLGKLEGVE++D+DIDAQKVTVKG V  DVVFQTVSKTGKKT++WE +  A+AAP A PAPAEAEAKPAEP+AA
Subjt:  TTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAA

XP_004150491.1 copper transport protein ATX1 [Cucumis sativus]9.4e-3082.98Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAA
        QTTVLKVAMSCQGCVGAVKRVLGKLEGVE++D+DIDAQKVTVKG V  DVVFQTVSKTGKKT++WE +  A+AAP A PAPAEAEAKPAEP+AA
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAA

XP_008446769.1 PREDICTED: copper transport protein ATX1-like [Cucumis melo]5.5e-3083.16Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAAA
        QTTVLKVAMSCQGCVGAVKRVLGKLEGV++FD+DIDAQKVTVKG V  DVVFQTVSKTGKKT++WE +  A+AAP A PAPAEAEAKPAEP+AAA
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAAA

XP_022150677.1 copper transport protein ATX1 [Momordica charantia]1.5e-3897.89Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAAA
        QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVG DVVFQTVSKTGKKTSFWEAEAP TAAPEAPPAPAEAEAKPAEPVAAA
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAAA

XP_038893429.1 copper transport protein ATX1-like [Benincasa hispida]9.4e-3080.81Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAA----PEAPPAPAEAEAKPAEPVAAA
        QTTVLKVAMSCQGCVGAVKRVLGKLEGVE+FD+DIDAQKVTVKG V  +VVFQTVSKTGKKT++WE +APA +A    P A PAPAEAEAKPAE VAAA
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAA----PEAPPAPAEAEAKPAEPVAAA

TrEMBL top hitse value%identityAlignment
A0A0A0KTF7 Copper chaperone4.6e-3082.98Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAA
        QTTVLKVAMSCQGCVGAVKRVLGKLEGVE++D+DIDAQKVTVKG V  DVVFQTVSKTGKKT++WE +  A+AAP A PAPAEAEAKPAEP+AA
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAA

A0A1S3BFW4 copper transport protein ATX1-like2.7e-3083.16Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAAA
        QTTVLKVAMSCQGCVGAVKRVLGKLEGV++FD+DIDAQKVTVKG V  DVVFQTVSKTGKKT++WE +  A+AAP A PAPAEAEAKPAEP+AAA
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAAA

A0A5A7SZ31 Copper transport protein ATX1-like2.7e-3083.16Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAAA
        QTTVLKVAMSCQGCVGAVKRVLGKLEGV++FD+DIDAQKVTVKG V  DVVFQTVSKTGKKT++WE +  A+AAP A PAPAEAEAKPAEP+AAA
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAAA

A0A6J1DBD6 copper transport protein ATX17.0e-3997.89Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAAA
        QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVG DVVFQTVSKTGKKTSFWEAEAP TAAPEAPPAPAEAEAKPAEPVAAA
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAAA

A0A6J1HTV3 copper transport protein ATX1-like isoform X31.9e-2876.42Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATA---------APEAPPA---PAEAEAKP
        QTTVLKVAMSCQGCVGAV+RVLGKLEGV++FD+DIDAQKVTVKG V  DVVFQTVSKTGKKT++WE EAPA A         APEA PA   PAEAEAKP
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATA---------APEAPPA---PAEAEAKP

Query:  AEPVAA
        AE VAA
Subjt:  AEPVAA

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 453.6e-0842.62Show/hide
Query:  LKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFW
        L V M C+GC   V+R + KL+GV++ ++D+D QKVTV G V  + V + V +TG+   +W
Subjt:  LKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFW

O82089 Copper transport protein CCH1.7e-2162.14Show/hide
Query:  LVQTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPP-------APAEAEAKPAEP
        + QT VLKV MSCQGCVGAV RVLGK+EGVESFD+DI  QKVTVKG V  + VFQTVSKTGKKTS+W  EA A    EA P          EAE K    
Subjt:  LVQTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPP-------APAEAEAKPAEP

Query:  VAA
        V A
Subjt:  VAA

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 14.7e-0846.15Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFW
        Q  VL+V++ C+GC G VK+ L KL+GV S+++D  A+KVTV G V    V  ++SK  K   FW
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFW

Q94BT9 Copper transport protein ATX16.8e-2374.32Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAA
        QT VL+VAM+C+GCVGAVKRVLGK+EGVESFDVDI  QKVTVKG V  D V QTV+KTGKKT+FWEAE     A
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAA

Q9M8K5 Heavy metal-associated isoprenylated plant protein 326.2e-0842.65Show/hide
Query:  VQTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEA
        +QT VLKV + C GC   VK++L K+EGV +  +D +  KVTV G+V   V+ + ++K+GK    W A
Subjt:  VQTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEA

Arabidopsis top hitse value%identityAlignment
AT1G66240.1 homolog of anti-oxidant 14.8e-2474.32Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAA
        QT VL+VAM+C+GCVGAVKRVLGK+EGVESFDVDI  QKVTVKG V  D V QTV+KTGKKT+FWEAE     A
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAA

AT1G66240.2 homolog of anti-oxidant 15.0e-2174.24Show/hide
Query:  MSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAA
        M+C+GCVGAVKRVLGK+EGVESFDVDI  QKVTVKG V  D V QTV+KTGKKT+FWEAE     A
Subjt:  MSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAA

AT3G56240.1 copper chaperone1.2e-2262.14Show/hide
Query:  LVQTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPP-------APAEAEAKPAEP
        + QT VLKV MSCQGCVGAV RVLGK+EGVESFD+DI  QKVTVKG V  + VFQTVSKTGKKTS+W  EA A    EA P          EAE K    
Subjt:  LVQTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPP-------APAEAEAKPAEP

Query:  VAA
        V A
Subjt:  VAA

AT3G56891.1 Heavy metal transport/detoxification superfamily protein2.6e-0942.62Show/hide
Query:  LKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFW
        L V M C+GC   V+R + KL+GV++ ++D+D QKVTV G V  + V + V +TG+   +W
Subjt:  LKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFW

AT5G02600.2 Heavy metal transport/detoxification superfamily protein3.4e-0946.15Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFW
        Q  VL+V++ C+GC G VK+ L KL+GV S+++D  A+KVTV G V    V  ++SK  K   FW
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGTGCAGACTACCGTTCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGGGCCGTTAAAAGGGTACTGGGAAAACTGGAAGGAGTCGAGTCTTTTGACGTCGACAT
AGATGCGCAAAAGGTGACTGTGAAAGGAACCGTGGGGTCTGACGTAGTTTTTCAAACTGTTTCAAAAACTGGGAAGAAGACTTCCTTCTGGGAAGCAGAAGCCCCGGCAA
CAGCAGCGCCAGAGGCGCCACCTGCACCAGCTGAAGCAGAAGCTAAACCTGCTGAGCCTGTGGCTGCTGCT
mRNA sequenceShow/hide mRNA sequence
TTGGTGCAGACTACCGTTCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGGGCCGTTAAAAGGGTACTGGGAAAACTGGAAGGAGTCGAGTCTTTTGACGTCGACAT
AGATGCGCAAAAGGTGACTGTGAAAGGAACCGTGGGGTCTGACGTAGTTTTTCAAACTGTTTCAAAAACTGGGAAGAAGACTTCCTTCTGGGAAGCAGAAGCCCCGGCAA
CAGCAGCGCCAGAGGCGCCACCTGCACCAGCTGAAGCAGAAGCTAAACCTGCTGAGCCTGTGGCTGCTGCT
Protein sequenceShow/hide protein sequence
LVQTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGSDVVFQTVSKTGKKTSFWEAEAPATAAPEAPPAPAEAEAKPAEPVAAA