; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004164 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004164
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRAB6-interacting golgin
Genome locationscaffold92:444455..446010
RNA-Seq ExpressionMS004164
SyntenyMS004164
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0004674 - protein serine/threonine kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034665.1 uncharacterized protein E6C27_scaffold65G006840 [Cucumis melo var. makuwa]3.6e-5881.99Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL
        MTS +GG  NG+R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEELEVMGDPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LME    SE+WRM+KLEEL+KNIEST+
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

XP_004150485.1 uncharacterized protein LOC101217540 [Cucumis sativus]5.9e-6184.91Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL
        MTS +GG  N +R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVELQL+RAEEEAKRLAQIWEELEVMGDPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIES
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES

XP_008446775.1 PREDICTED: uncharacterized protein LOC103489402 [Cucumis melo]4.1e-6284.47Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL
        MTS +GG  NG+R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEELEVMGDPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIEST+
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

XP_022150510.1 uncharacterized protein LOC111018644 [Momordica charantia]7.9e-7498.76Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL
        MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEEL+VM DPMRKEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

XP_038892385.1 uncharacterized protein LOC120081508 [Benincasa hispida]7.5e-5681.82Show/hide
Query:  SRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELKSLGQIC
        S+NG      G +D+ EDEM+SKLT+STLQAREEEI++KKMEV+EKVE QL+RAEEEAKRLAQIWEELEVMGDPM KEVGNVRKRIDTVKRELKSLGQIC
Subjt:  SRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELKSLGQIC

Query:  QKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        QKKEKE KE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIEST+
Subjt:  QKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

TrEMBL top hitse value%identityAlignment
A0A0A0KTG1 RAB6-interacting golgin2.9e-6184.91Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL
        MTS +GG  N +R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVELQL+RAEEEAKRLAQIWEELEVMGDPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIES
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES

A0A1S3BFW5 RAB6-interacting golgin2.0e-6284.47Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL
        MTS +GG  NG+R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEELEVMGDPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIEST+
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

A0A5D3CFS0 RAB6-interacting golgin1.7e-5881.99Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL
        MTS +GG  NG+R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEELEVMGDPM KEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LME    SE+WRM+KLEEL+KNIEST+
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

A0A6J1D8N9 RAB6-interacting golgin3.8e-7498.76Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL
        MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEEL+VM DPMRKEVGNVRKRIDTVKREL
Subjt:  MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
Subjt:  KSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

A0A6J1HV92 RAB6-interacting golgin3.1e-5579.63Show/hide
Query:  MTSNDGGSRNGERTSIEGSDDQEED-EMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRE
        MTS  G   NGER   EGS  ++ED EM  +LTVSTLQAREEEI+R+KMEV+EKVELQLSRAEEEAKRLAQIWEELEVMGDPM KEVGNVRKRIDT K+E
Subjt:  MTSNDGGSRNGERTSIEGSDDQEED-EMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRE

Query:  LKSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        LKSLGQICQKKEKEYKE LEIFNEK+NEKAQLL  LMELL QSERWRM KLEEL+K+I  T+
Subjt:  LKSLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.2 Family of unknown function (DUF662)9.1e-3658.82Show/hide
Query:  EDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETLEIFNE
        EDE +++  +S  +A+E+EI++++MEVRE+++ QL R E+E KRL+ I EELE M DPMRKEV  VRK+ID+V +ELK LG   QKKE+EYKE L+ FNE
Subjt:  EDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETLEIFNE

Query:  KSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES
        K+ EK QL+  LMEL+G+SE+ RM KLEELSK+IE+
Subjt:  KSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES

AT2G36410.3 Family of unknown function (DUF662)1.3e-3458.09Show/hide
Query:  EDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETLEIFNE
        EDE +++  +S  +A+E+EI++++MEVRE+++ QL R E+E KRL+ I EELE M DPMRKEV  VRK+ID+V +ELK LG   QKK  EYKE L+ FNE
Subjt:  EDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETLEIFNE

Query:  KSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES
        K+ EK QL+  LMEL+G+SE+ RM KLEELSK+IE+
Subjt:  KSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES

AT3G09980.1 Family of unknown function (DUF662)1.4e-3962.24Show/hide
Query:  SDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETL
        S   +EDE +S+  +S  +A+EEEI++KKME+RE+V+ QL R EEE KRLA I EELE + DPMRKEV  VRK+ID+V +ELK LG   QKKE+EYKE L
Subjt:  SDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETL

Query:  EIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH
        E FNEK+ EK QL+  LMEL+G+SE+ RM+KLEELSKNI+S H
Subjt:  EIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH

AT3G52900.1 Family of unknown function (DUF662)2.0e-3555.77Show/hide
Query:  SNDGGSR-NGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELK
        +N G +  +G  T+ +   +  E+E + K+ V+  QAREEEI+RKKM V+EKV+ +L  AEE  + L Q  EELE+MGDPMRKEVG VRK+ID   R++K
Subjt:  SNDGGSR-NGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELK

Query:  SLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNI
        SL Q CQKKEKEYK+TLE FNEK+ EKA L++ LMELL +SER R++KLEE++K +
Subjt:  SLGQICQKKEKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNI

AT3G52920.2 Family of unknown function (DUF662)1.6e-3556.74Show/hide
Query:  SDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETL
        S   +EDE +++  +S  +A+E+EI+++KMEVRE+V+ QL R EEE +RLA I EELE M DPMRKEV  VRK+ID+V +ELK LG   QKKE+EYKE L
Subjt:  SDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKETL

Query:  EIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES
        + FNEK+ EK QL+  LMEL+G+SE+ R++KL+ELS++I++
Subjt:  EIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGTAACGATGGTGGCAGCAGAAATGGCGAGAGAACTTCAATAGAAGGGAGTGACGATCAAGAGGAAGACGAGATGGTGTCGAAACTGACCGTATCTACATTACA
AGCTAGAGAAGAAGAGATCGATAGGAAGAAGATGGAAGTAAGAGAGAAGGTCGAACTTCAATTAAGCCGTGCCGAGGAAGAAGCGAAACGCTTAGCACAGATTTGGGAAG
AGCTGGAGGTAATGGGAGACCCAATGAGGAAGGAAGTTGGCAACGTGCGAAAAAGAATAGACACAGTCAAGAGAGAACTGAAATCACTGGGACAGATATGCCAAAAGAAG
GAAAAAGAATATAAAGAGACCCTGGAAATATTCAATGAGAAAAGCAACGAGAAAGCTCAGCTACTCGCTGCACTAATGGAGCTGCTGGGTCAGAGTGAGAGATGGAGGAT
GGAAAAGCTCGAGGAATTGAGTAAGAACATAGAGTCAACGCAC
mRNA sequenceShow/hide mRNA sequence
ATGACGAGTAACGATGGTGGCAGCAGAAATGGCGAGAGAACTTCAATAGAAGGGAGTGACGATCAAGAGGAAGACGAGATGGTGTCGAAACTGACCGTATCTACATTACA
AGCTAGAGAAGAAGAGATCGATAGGAAGAAGATGGAAGTAAGAGAGAAGGTCGAACTTCAATTAAGCCGTGCCGAGGAAGAAGCGAAACGCTTAGCACAGATTTGGGAAG
AGCTGGAGGTAATGGGAGACCCAATGAGGAAGGAAGTTGGCAACGTGCGAAAAAGAATAGACACAGTCAAGAGAGAACTGAAATCACTGGGACAGATATGCCAAAAGAAG
GAAAAAGAATATAAAGAGACCCTGGAAATATTCAATGAGAAAAGCAACGAGAAAGCTCAGCTACTCGCTGCACTAATGGAGCTGCTGGGTCAGAGTGAGAGATGGAGGAT
GGAAAAGCTCGAGGAATTGAGTAAGAACATAGAGTCAACGCAC
Protein sequenceShow/hide protein sequence
MTSNDGGSRNGERTSIEGSDDQEEDEMVSKLTVSTLQAREEEIDRKKMEVREKVELQLSRAEEEAKRLAQIWEELEVMGDPMRKEVGNVRKRIDTVKRELKSLGQICQKK
EKEYKETLEIFNEKSNEKAQLLAALMELLGQSERWRMEKLEELSKNIESTH