CuGenDBv2

Gene ID	MS004174
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold92:515295..515798
RNA-Seq Expression	MS004174
Synteny	MS004174
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7032002.1 hypothetical protein SDJN02_06044, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.9e-52

75.6

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Query:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG
        MLGFLT+P QW  +    L S+ +P S S  S  +   FKF LHY      SQIP  R RFTA + N DNGLGGNIKEREGER GAKGSNG DDL+KERG
Subjt:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG

Query:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL
        PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAA+LIFILITLL
Subjt:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

XP_022139143.1 uncharacterized protein LOC111010120 [Momordica charantia]

1.7e-79

98.81

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Query:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG
        MLGF TLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG
Subjt:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG

Query:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL
        PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAA+LIFILITLL
Subjt:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

XP_022957096.1 uncharacterized protein LOC111458579 [Cucurbita moschata]

2.6e-51

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Query:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG
        MLGFLT+P QW  +    L S+ +P S S  S  +   FKF LHY    + SQIP  R RFTA + N DNGLGGNIKEREGER GAKGS G DDL+KERG
Subjt:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG

Query:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL
        PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAA+LIFILITLL
Subjt:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

XP_022993576.1 uncharacterized protein LOC111489528 [Cucurbita maxima]

2.6e-51

74.4

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Query:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG
        MLGFLT+P QW  +     SS+P P S+   S  + P FKF LHY    + SQI   R RF A + N DNGLGGNIKEREGER GAKGS G DDL+KERG
Subjt:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG

Query:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL
        PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAA+LIFILITLL
Subjt:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

XP_023549272.1 uncharacterized protein LOC111807677 [Cucurbita pepo subsp. pepo]

2.5e-54

77.38

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Query:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG
        MLGFLT+P QW  +    LSS+ +P S S  S  + P FKF LHY    + SQIP  R RFTA + N DNGLGGNIKEREGER GAKGSNGGDDL+KERG
Subjt:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG

Query:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL
        PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAA+LIFILITLL
Subjt:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BFX0 uncharacterized protein LOC103489407

3.5e-46

71.01

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Query:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAK-GSNGGDDLKKER
        MLGFLT+P Q   +    L+S P+ SS S + L   P +KF LH+    ++  I  NR RFTA + N +   GG+IKEREGER GAK  SNGGDDLKKER
Subjt:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAK-GSNGGDDLKKER

Query:  GPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL
        GPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAA+LIFILITLL
Subjt:  GPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

A0A5D3CD16 Uncharacterized protein

3.5e-46

71.01

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Query:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAK-GSNGGDDLKKER
        MLGFLT+P Q   +    L+S P+ SS S + L   P +KF LH+    ++  I  NR RFTA + N +   GG+IKEREGER GAK  SNGGDDLKKER
Subjt:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAK-GSNGGDDLKKER

Query:  GPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL
        GPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAA+LIFILITLL
Subjt:  GPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

A0A6J1CF05 uncharacterized protein LOC111010120

8.3e-80

98.81

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Query:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG
        MLGF TLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG
Subjt:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG

Query:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL
        PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAA+LIFILITLL
Subjt:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

A0A6J1GYA2 uncharacterized protein LOC111458579

1.3e-51

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Query:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG
        MLGFLT+P QW  +    L S+ +P S S  S  +   FKF LHY    + SQIP  R RFTA + N DNGLGGNIKEREGER GAKGS G DDL+KERG
Subjt:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG

Query:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL
        PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAA+LIFILITLL
Subjt:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

A0A6J1JWP5 uncharacterized protein LOC111489528

1.3e-51

74.4

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Query:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG
        MLGFLT+P QW  +     SS+P P S+   S  + P FKF LHY    + SQI   R RF A + N DNGLGGNIKEREGER GAKGS G DDL+KERG
Subjt:  MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERG

Query:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL
        PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAA+LIFILITLL
Subjt:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G40045.1 unknown protein

2.0e-17

48.15

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Query:  PRFKFTL---HYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASV
        PRF + +   H+ + + +S  P    R  A +GN       + KE  G       ++ G+  KK++   F+ KW ELL +PD DN +AV L G+L WAS+
Subjt:  PRFKFTL---HYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASV

Query:  QVLWQLFFISLAILVAALKYSFIAAVLIFILITLL
        QVL QLFFIS AILVAALKYSFIAA+LIFIL+TLL
Subjt:  QVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

Sequences

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CDS sequence

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ATGTTAGGGTTTCTTACTCTCCCATGCCAATGGAGCTCCGCATCTGTCCGCCTTCTTTCTTCAACTCCTACACCTTCTTCCTCCTCAAAAATATCTCTCCGCACCGTTCC
ACGCTTCAAATTCACTCTCCATTACGCGTTGCTCATGACGCGATCTCAAATTCCTCGAAACCGCGCAAGATTTACGGCGTTCTCTGGCAATGGCGATAATGGTCTGGGAG
GAAACATCAAAGAGAGAGAAGGAGAAAGAACTGGGGCGAAGGGCTCCAACGGAGGAGACGATTTGAAGAAAGAACGAGGGCCAGTTTTCAATATCAAATGGGCGGAACTT
CTGATTGATCCGGATCCTGACAACATCTTGGCGGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGCGTTCAGGTTTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTT
AGTGGCAGCTCTCAAGTACTCTTTTATTGCAGCAGTTCTTATTTTCATTCTAATTACACTGCTC

mRNA sequence

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Protein sequence

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MLGFLTLPCQWSSASVRLLSSTPTPSSSSKISLRTVPRFKFTLHYALLMTRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKGSNGGDDLKKERGPVFNIKWAEL
LIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAAVLIFILITLL

MS004174 (gene) of Bitter gourd (TR) v1 genome