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MS004185 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004185
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
Genome locationscaffold92:651183..651569
RNA-Seq ExpressionMS004185
SyntenyMS004185
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022139169.1 cyclin-dependent protein kinase inhibitor SMR1-like [Momordica charantia]3.3e-6299.21Show/hide
Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVIDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS
        MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGV+DQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVIDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS

Query:  REEIEPYLASSFEHEDRVKSAKRSFC
        REEIEPYLASSFEHEDRVKSAKRSFC
Subjt:  REEIEPYLASSFEHEDRVKSAKRSFC

XP_022957068.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]1.4e-4479.55Show/hide
Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM-ADGGGVIDQKER-SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI
        MSTDLDLRRTLL +VRRPA KLQI  PRP +SM AD GGVI QKER  + D GAE+ CCRTPTS ENKIP +LQCPPAPRKRKRPPTCRRRL+ELEFVEI
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM-ADGGGVIDQKER-SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI

Query:  VSREEIEPYLASSFEHEDRV-KSAKRSFCECK
        VSREEIEPY  SSF+HE+RV KSAK SFCECK
Subjt:  VSREEIEPYLASSFEHEDRV-KSAKRSFCECK

XP_022992922.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]5.2e-4478.03Show/hide
Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM-ADGGGVIDQKERSSSDDGAEDQ-CCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI
        MSTDLDLRRTLL +VRRPA KLQI  PRP +SM AD GGVI QKER  + DG +++ CCRTPTS ENKIP +LQCPPAPRKRKRPPTCRRRL+ELEFVEI
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM-ADGGGVIDQKERSSSDDGAEDQ-CCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI

Query:  VSREEIEPYLASSFEHEDRV-KSAKRSFCECK
        VSREEIEPY  SSF+HE+RV KSAK SFCECK
Subjt:  VSREEIEPYLASSFEHEDRV-KSAKRSFCECK

XP_023531359.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]8.1e-4579.55Show/hide
Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM-ADGGGVIDQKERSSS-DDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI
        MSTDLDLRRTLL +VRRPA KLQI  PRP +SM AD GGVI QKER+   D GAE+ CCRTPTS ENKIP +LQCPPAPRKRKRPPTCRRRL+ELEFVEI
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM-ADGGGVIDQKERSSS-DDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI

Query:  VSREEIEPYLASSFEHEDRV-KSAKRSFCECK
        VSREEIEPY  SSF+HE+RV KSAK SFCECK
Subjt:  VSREEIEPYLASSFEHEDRV-KSAKRSFCECK

XP_038893025.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]1.8e-4479.39Show/hide
Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVIDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIV
        MSTDLDLRRTLL IVRRP  KLQI  P PSTSMA D GGVI QK+R + ++  E+ CCRTPTS ENKIPA++QCPPAPRKRKRPP+CRRRLMELEFVEIV
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVIDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIV

Query:  SREEIEPYLASSFEHEDRV-KSAKRSFCECK
        +REEIEPYL SSF+HEDRV KSAKRSFCECK
Subjt:  SREEIEPYLASSFEHEDRV-KSAKRSFCECK

TrEMBL top hitse value%identityAlignment
A0A1S3BFF9 cyclin-dependent protein kinase inhibitor SMR1-like4.8e-4374.81Show/hide
Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM---ADGGGVIDQKER--SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEF
        MST+LDLRRTLL IVRRP  KLQI  P PST++    D GGVI QK+R     D GAE+ CCRTPTS ENKIPA++QCPPAPRKRKRPP+CRRRLMELEF
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM---ADGGGVIDQKER--SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEF

Query:  VEIVSREEIEPYLASSFEHEDRV-KSAKRSFCECK
        VEIV R+EIEPYL +SF+HEDRV KSAKRSFCECK
Subjt:  VEIVSREEIEPYLASSFEHEDRV-KSAKRSFCECK

A0A5D3CD68 Cyclin-dependent protein kinase inhibitor SMR1-like4.8e-4374.81Show/hide
Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM---ADGGGVIDQKER--SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEF
        MST+LDLRRTLL IVRRP  KLQI  P PST++    D GGVI QK+R     D GAE+ CCRTPTS ENKIPA++QCPPAPRKRKRPP+CRRRLMELEF
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM---ADGGGVIDQKER--SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEF

Query:  VEIVSREEIEPYLASSFEHEDRV-KSAKRSFCECK
        VEIV R+EIEPYL +SF+HEDRV KSAKRSFCECK
Subjt:  VEIVSREEIEPYLASSFEHEDRV-KSAKRSFCECK

A0A6J1CC62 cyclin-dependent protein kinase inhibitor SMR1-like1.6e-6299.21Show/hide
Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVIDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS
        MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGV+DQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVIDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS

Query:  REEIEPYLASSFEHEDRVKSAKRSFC
        REEIEPYLASSFEHEDRVKSAKRSFC
Subjt:  REEIEPYLASSFEHEDRVKSAKRSFC

A0A6J1GZ63 cyclin-dependent protein kinase inhibitor SMR1-like6.7e-4579.55Show/hide
Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM-ADGGGVIDQKER-SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI
        MSTDLDLRRTLL +VRRPA KLQI  PRP +SM AD GGVI QKER  + D GAE+ CCRTPTS ENKIP +LQCPPAPRKRKRPPTCRRRL+ELEFVEI
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM-ADGGGVIDQKER-SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI

Query:  VSREEIEPYLASSFEHEDRV-KSAKRSFCECK
        VSREEIEPY  SSF+HE+RV KSAK SFCECK
Subjt:  VSREEIEPYLASSFEHEDRV-KSAKRSFCECK

A0A6J1JRA3 cyclin-dependent protein kinase inhibitor SMR1-like2.5e-4478.03Show/hide
Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM-ADGGGVIDQKERSSSDDGAEDQ-CCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI
        MSTDLDLRRTLL +VRRPA KLQI  PRP +SM AD GGVI QKER  + DG +++ CCRTPTS ENKIP +LQCPPAPRKRKRPPTCRRRL+ELEFVEI
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSM-ADGGGVIDQKERSSSDDGAEDQ-CCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI

Query:  VSREEIEPYLASSFEHEDRV-KSAKRSFCECK
        VSREEIEPY  SSF+HE+RV KSAK SFCECK
Subjt:  VSREEIEPYLASSFEHEDRV-KSAKRSFCECK

SwissProt top hitse value%identityAlignment
Q29Q81 Cyclin-dependent protein kinase inhibitor SMR68.5e-0553.85Show/hide
Query:  EDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLM
        E++C  TPT+ E KIP LL+CPPAPRKR+    CR  ++
Subjt:  EDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLM

Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR15.3e-0731.63Show/hide
Query:  ERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPP-------------TCRRRLMELEFVEIVSREEIEPYLASSFEHEDRVKSAKRSFCEC
        ++   DD  +D  C TPTS E+KIPA++  PP P ++ RPP             +C+R+L+      I++REEI+ + +S +         +RS+  C
Subjt:  ERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPP-------------TCRRRLMELEFVEIVSREEIEPYLASSFEHEDRVKSAKRSFCEC

Arabidopsis top hitse value%identityAlignment
AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS3.8e-0831.63Show/hide
Query:  ERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPP-------------TCRRRLMELEFVEIVSREEIEPYLASSFEHEDRVKSAKRSFCEC
        ++   DD  +D  C TPTS E+KIPA++  PP P ++ RPP             +C+R+L+      I++REEI+ + +S +         +RS+  C
Subjt:  ERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPP-------------TCRRRLMELEFVEIVSREEIEPYLASSFEHEDRVKSAKRSFCEC

AT5G40460.1 unknown protein6.0e-0653.85Show/hide
Query:  EDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLM
        E++C  TPT+ E KIP LL+CPPAPRKR+    CR  ++
Subjt:  EDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACGGACCTTGATCTCCGGCGGACTCTGTTAGGAATTGTGCGCCGTCCGGCGAGCAAACTTCAAATTAGTAATCCGCGCCCGTCGACGTCGATGGCGGACGGCGG
CGGTGTAATTGATCAGAAAGAGAGAAGCAGCAGCGATGACGGTGCCGAAGATCAATGCTGCCGCACGCCGACCTCCGTGGAGAACAAGATTCCGGCGCTGCTTCAATGTC
CGCCGGCGCCGCGGAAGCGGAAGAGACCTCCGACTTGTAGAAGAAGACTAATGGAGCTTGAATTCGTGGAGATCGTGAGTAGAGAAGAGATCGAACCGTATTTAGCCTCG
AGTTTCGAGCACGAAGACAGAGTTAAATCGGCGAAGAGAAGTTTCTGTGAGTGTAAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACGGACCTTGATCTCCGGCGGACTCTGTTAGGAATTGTGCGCCGTCCGGCGAGCAAACTTCAAATTAGTAATCCGCGCCCGTCGACGTCGATGGCGGACGGCGG
CGGTGTAATTGATCAGAAAGAGAGAAGCAGCAGCGATGACGGTGCCGAAGATCAATGCTGCCGCACGCCGACCTCCGTGGAGAACAAGATTCCGGCGCTGCTTCAATGTC
CGCCGGCGCCGCGGAAGCGGAAGAGACCTCCGACTTGTAGAAGAAGACTAATGGAGCTTGAATTCGTGGAGATCGTGAGTAGAGAAGAGATCGAACCGTATTTAGCCTCG
AGTTTCGAGCACGAAGACAGAGTTAAATCGGCGAAGAGAAGTTTCTGTGAGTGTAAA
Protein sequenceShow/hide protein sequence
MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVIDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVSREEIEPYLAS
SFEHEDRVKSAKRSFCECK