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MS004210 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004210
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold92:847716..848189
RNA-Seq ExpressionMS004210
SyntenyMS004210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648853.1 hypothetical protein Csa_008932 [Cucumis sativus]1.9e-1046.79Show/hide
Query:  MALRYGPFTFLFFFVFIVSSPSTIMTTSRGMLAIKPTIATLEATVPSSSVEVSSSTIPL-------ISLSPHSDDFVNFEVPNGMG-ARPPMIDWALRSC
        MALR+ P  F F  V  ++S ST M TSR ML I+PT  T++A  PS    VS +T+          S+ P   DFV FEVP+ +  A PPM DW +RSC
Subjt:  MALRYGPFTFLFFFVFIVSSPSTIMTTSRGMLAIKPTIATLEATVPSSSVEVSSSTIPL-------ISLSPHSDDFVNFEVPNGMG-ARPPMIDWALRSC

Query:  KPKGKFRYS
        KPKG+ R S
Subjt:  KPKGKFRYS

KAE8649707.1 hypothetical protein Csa_012825 [Cucumis sativus]6.0e-0943.75Show/hide
Query:  MALRYGPFTFLFFFVFIVSSPSTIMTTSRGMLAIKPTIATLEATV----PSSSVEVSSSTIPLISLSPHSDDFVNFEVPNGMGARPPMIDWALRSCKPKG
        MA ++    F FFF+  +SSPS I+ T+RGML +     TLE +       S  EV  S+   ISL P SD+F++F+ PNGMGAR P +  +L  CKPKG
Subjt:  MALRYGPFTFLFFFVFIVSSPSTIMTTSRGMLAIKPTIATLEATV----PSSSVEVSSSTIPLISLSPHSDDFVNFEVPNGMGARPPMIDWALRSCKPKG

Query:  KFRYSAPSDRRN
           +SAP+ + N
Subjt:  KFRYSAPSDRRN

KAE8649709.1 hypothetical protein Csa_012565, partial [Cucumis sativus]2.1e-0944.64Show/hide
Query:  MALRYGPFTFLFFFVFIVSSPSTIMTTSRGMLAIKPTIATLEATV----PSSSVEVSSSTIPLISLSPHSDDFVNFEVPNGMGARPPMIDWALRSCKPKG
        MA ++    F FFF+  +SSPS IM T+RGML +     TLE +       S  EV  S+   ISL P SD+F++F+ PNGMGAR P +  +L  CKPKG
Subjt:  MALRYGPFTFLFFFVFIVSSPSTIMTTSRGMLAIKPTIATLEATV----PSSSVEVSSSTIPLISLSPHSDDFVNFEVPNGMGARPPMIDWALRSCKPKG

Query:  KFRYSAPSDRRN
           +SAP+ + N
Subjt:  KFRYSAPSDRRN

KAG6573847.1 hypothetical protein SDJN03_27734, partial [Cucurbita argyrosperma subsp. sororia]9.9e-1253.26Show/hide
Query:  IVSSPSTIMTTSRGMLAIKPTIATLEATVPSSSVEVSSSTIPLISLSPHSDDFVNFEVPNGMGARPPMIDWALRSCKPKGKFRYSAPSDRRN
        ++ +PST  TT  G    + T +T EAT    +V  S S    I +SP S+DFV FEVPNGM A+PPM +  +RSCKPKG+ RYSAPSDRRN
Subjt:  IVSSPSTIMTTSRGMLAIKPTIATLEATVPSSSVEVSSSTIPLISLSPHSDDFVNFEVPNGMGARPPMIDWALRSCKPKGKFRYSAPSDRRN

TYK09256.1 hypothetical protein E5676_scaffold475G002500 [Cucumis melo var. makuwa]1.6e-1446.34Show/hide
Query:  MALRYGPFTFLFFFVFIVSSPSTIMTTSRGMLAIKPTIATLEATVPSSSVEV--SSSTIPL-------------ISLSPHSDDFVNFEVPNGMGARPPMI
        MAL   P  F  F V  ++S ST M TSR ML I PT  T+    P+  V+   S+S+ PL              S+ P   DFV FEVP+ + A PP  
Subjt:  MALRYGPFTFLFFFVFIVSSPSTIMTTSRGMLAIKPTIATLEATVPSSSVEV--SSSTIPL-------------ISLSPHSDDFVNFEVPNGMGARPPMI

Query:  DWALRSCKPKGKFRYSAPSDRRN
        DW +RSCKPKG+ RYSAPSDRRN
Subjt:  DWALRSCKPKGKFRYSAPSDRRN

TrEMBL top hitse value%identityAlignment
A0A0A0KRI3 Uncharacterized protein9.0e-1152.17Show/hide
Query:  MTTSRGMLAIKPTIATLEATVPSSSVEVSSSTIPL-------ISLSPHSDDFVNFEVPNGMG-ARPPMIDWALRSCKPKGKFRYSAPSDRRN
        M TSR ML I+PT  T++A  PS    VS +T+          S+ P   DFV FEVP+ +  A PPM DW +RSCKPKG+ RYSAPSDRRN
Subjt:  MTTSRGMLAIKPTIATLEATVPSSSVEVSSSTIPL-------ISLSPHSDDFVNFEVPNGMG-ARPPMIDWALRSCKPKGKFRYSAPSDRRN

A0A0A0L2F6 Uncharacterized protein6.3e-0437.5Show/hide
Query:  MALRYGPFTFLF-FFVFIVSSPSTIMTTSRGMLAIKPTIATLEAT--VPSSSVEVSSSTIPLISLSPHSDDFVNFEVPNGMGAR-PPMIDWALRSCKPKG
        M  R  PF F++ FF+FI+SSP+T+M TSR +L ++PT  T +A   V  SS  ++++T P    S       + ++  G   +        L+SCKPKG
Subjt:  MALRYGPFTFLF-FFVFIVSSPSTIMTTSRGMLAIKPTIATLEAT--VPSSSVEVSSSTIPLISLSPHSDDFVNFEVPNGMGAR-PPMIDWALRSCKPKG

Query:  KFRYSAPSDRRN
          R+S+PS  RN
Subjt:  KFRYSAPSDRRN

A0A5D3CFX3 Uncharacterized protein7.9e-1546.34Show/hide
Query:  MALRYGPFTFLFFFVFIVSSPSTIMTTSRGMLAIKPTIATLEATVPSSSVEV--SSSTIPL-------------ISLSPHSDDFVNFEVPNGMGARPPMI
        MAL   P  F  F V  ++S ST M TSR ML I PT  T+    P+  V+   S+S+ PL              S+ P   DFV FEVP+ + A PP  
Subjt:  MALRYGPFTFLFFFVFIVSSPSTIMTTSRGMLAIKPTIATLEATVPSSSVEV--SSSTIPL-------------ISLSPHSDDFVNFEVPNGMGARPPMI

Query:  DWALRSCKPKGKFRYSAPSDRRN
        DW +RSCKPKG+ RYSAPSDRRN
Subjt:  DWALRSCKPKGKFRYSAPSDRRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTACGATATGGTCCTTTTACTTTCTTGTTCTTTTTTGTCTTTATTGTATCTTCTCCTTCTACAATCATGACAACGTCTAGAGGTATGCTTGCTATAAAACCTAC
TATAGCAACTTTAGAAGCTACGGTACCAAGTTCTAGTGTCGAAGTGTCTTCGTCAACCATCCCGTTGATTTCATTGTCTCCACATTCTGATGACTTCGTCAATTTTGAGG
TTCCAAATGGAATGGGCGCAAGGCCACCAATGATTGATTGGGCTCTTCGAAGCTGCAAGCCCAAAGGAAAATTTAGGTATTCTGCTCCCAGTGATCGCAGAAAT
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTACGATATGGTCCTTTTACTTTCTTGTTCTTTTTTGTCTTTATTGTATCTTCTCCTTCTACAATCATGACAACGTCTAGAGGTATGCTTGCTATAAAACCTAC
TATAGCAACTTTAGAAGCTACGGTACCAAGTTCTAGTGTCGAAGTGTCTTCGTCAACCATCCCGTTGATTTCATTGTCTCCACATTCTGATGACTTCGTCAATTTTGAGG
TTCCAAATGGAATGGGCGCAAGGCCACCAATGATTGATTGGGCTCTTCGAAGCTGCAAGCCCAAAGGAAAATTTAGGTATTCTGCTCCCAGTGATCGCAGAAAT
Protein sequenceShow/hide protein sequence
MALRYGPFTFLFFFVFIVSSPSTIMTTSRGMLAIKPTIATLEATVPSSSVEVSSSTIPLISLSPHSDDFVNFEVPNGMGARPPMIDWALRSCKPKGKFRYSAPSDRRN