CuGenDBv2

Gene ID	MS004219
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DNL-type domain-containing protein
Genome location	scaffold92:904180..904683
RNA-Seq Expression	MS004219
Synteny	MS004219
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0030150 - protein import into mitochondrial matrix (biological process) GO:0050821 - protein stabilization (biological process) GO:0005739 - mitochondrion (cellular component) GO:0008270 - zinc ion binding (molecular function) GO:0051087 - chaperone binding (molecular function)
InterPro domains	IPR007853 - Zinc finger, DNL-type IPR024158 - Mitochondrial import protein TIM15

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034710.1 DNL-type zinc finger protein [Cucumis melo var. makuwa]

5.7e-67

80.75

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Query:  IHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRSSYE
        +HPFANS FLTG+RFLRR   T A PA+AE+SKDNED KL+P+S+  DPL + K +D+++VKYSVLSNLK SPRHDLAMIFTCKVCETRSIKTVCR SYE
Subjt:  IHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRSSYE

Query:  KGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
        KGVVVARCGGC+NLHLIADHLGWFGEPGS+EDFLAARGEEVRKGS+DSLSLTL+DLAGK S
Subjt:  KGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS

XP_004142433.2 uncharacterized protein LOC101207740 [Cucumis sativus]

1.6e-69

82.32

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Query:  TCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRS
        TC IH FANS FLTGH+F RR N T A PA+AEDSKDNEDNKL+P+SD   PL + K +D+++VKYSVLSNLK SPRHDLAMIFTCKVCETRSIKTVCR 
Subjt:  TCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRS

Query:  SYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
        SYEKGVVVARCGGCNNLHLIADHLGWFGEPGS+EDFLAARGEEVRKGS+DSLSLTL+DLAGK S
Subjt:  SYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS

XP_022138898.1 uncharacterized protein LOC111009963 [Momordica charantia]

1.3e-87

98.79

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Query:  CTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCR
        CTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKN+DSAAVKYSV+SNLKMSPRHDLAMIFTCKVCETRSIKTVCR
Subjt:  CTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCR

Query:  SSYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
        SSYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
Subjt:  SSYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS

XP_038891384.1 DNL-type zinc finger protein isoform X1 [Benincasa hispida]

6.3e-74

85.98

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Query:  TCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRS
        TC IHPFANS FLTGHRF RRGNQT+A PA+AEDSKDNEDNKL P+SD  DPL + K +D++AVKYSVLSNLK SPRHDLAMIFTCKVCETRSIKTVCR 
Subjt:  TCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRS

Query:  SYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
        SYEKGVVVARCGGC+NLHLIADHLGWFGEPGS+EDFLAARGEEVRKGS+DSLSLTL+DLAGKKS
Subjt:  SYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS

XP_038891386.1 DNL-type zinc finger protein isoform X2 [Benincasa hispida]

1.3e-74

85.12

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Query:  MAVCTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKT
        MA  TC IHPFANS FLTGHRF RRGNQT+A PA+AEDSKDNEDNKL P+SD  DPL + K +D++AVKYSVLSNLK SPRHDLAMIFTCKVCETRSIKT
Subjt:  MAVCTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKT

Query:  VCRSSYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
        VCR SYEKGVVVARCGGC+NLHLIADHLGWFGEPGS+EDFLAARGEEVRKGS+DSLSLTL+DLAGKKS
Subjt:  VCRSSYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUY3 DNL-type domain-containing protein

7.8e-70

82.32

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Query:  TCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRS
        TC IH FANS FLTGH+F RR N T A PA+AEDSKDNEDNKL+P+SD   PL + K +D+++VKYSVLSNLK SPRHDLAMIFTCKVCETRSIKTVCR 
Subjt:  TCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRS

Query:  SYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
        SYEKGVVVARCGGCNNLHLIADHLGWFGEPGS+EDFLAARGEEVRKGS+DSLSLTL+DLAGK S
Subjt:  SYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS

A0A1S4DW08 DNL-type zinc finger protein

2.8e-67

80.75

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Query:  IHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRSSYE
        +HPFANS FLTG+RFLRR   T A PA+AE+SKDNED KL+P+S+  DPL + K +D+++VKYSVLSNLK SPRHDLAMIFTCKVCETRSIKTVCR SYE
Subjt:  IHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRSSYE

Query:  KGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
        KGVVVARCGGC+NLHLIADHLGWFGEPGS+EDFLAARGEEVRKGS+DSLSLTL+DLAGK S
Subjt:  KGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS

A0A5D3CBP4 DNL-type zinc finger protein

2.8e-67

80.75

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Query:  IHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRSSYE
        +HPFANS FLTG+RFLRR   T A PA+AE+SKDNED KL+P+S+  DPL + K +D+++VKYSVLSNLK SPRHDLAMIFTCKVCETRSIKTVCR SYE
Subjt:  IHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRSSYE

Query:  KGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
        KGVVVARCGGC+NLHLIADHLGWFGEPGS+EDFLAARGEEVRKGS+DSLSLTL+DLAGK S
Subjt:  KGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS

A0A6J1CEE4 uncharacterized protein LOC111009963

6.4e-88

98.79

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Query:  CTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCR
        CTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKN+DSAAVKYSV+SNLKMSPRHDLAMIFTCKVCETRSIKTVCR
Subjt:  CTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCR

Query:  SSYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
        SSYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
Subjt:  SSYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS

A0A6J1GYW7 uncharacterized protein C24H6.02c

5.8e-65

77.44

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Query:  TCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRS
        TCQIHPFANS FLTG RF  RGNQ++AN ++AEDSKDNE N +            E  +D +AVKYSV+SNLK SPRHDLAMIFTCKVCETRSIKTVCR 
Subjt:  TCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRS

Query:  SYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS
        SYEKGVVVARCGGCNNLHLIADHLGWFGEPGS+EDFLAARGEEVRKGS+DSLSL+L+DLAGK S
Subjt:  SYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS

SwissProt top hits

e value

%identity

Alignment

A1L1P7 DNL-type zinc finger protein

7.7e-14

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Query:  MIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSIEDFLAARGEEVRK
        +++TCKVC TRS+K + + +Y KGVV+  C GC N H+IAD+L WF +     +IE+ LAA+GE VR+
Subjt:  MIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSIEDFLAARGEEVRK

Q09759 Uncharacterized protein C24H6.02c

6.7e-10

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Query:  QEKNNDSAAVKYSVLSNL-KMSPRHDLAMIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLGWFGEPG-SIEDFLAARGEEVRKG
        Q    D A+   SV S+  ++ P+    + FTC VC TRS     + +Y  G V+ +C  C N HL+ADHL  F E   +IED LA +GE  +KG
Subjt:  QEKNNDSAAVKYSVLSNL-KMSPRHDLAMIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLGWFGEPG-SIEDFLAARGEEVRKG

Q0IH40 DNL-type zinc finger protein

2.8e-16

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Query:  LKMSPRHDLAMIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSIEDFLAARGEEVRK
        L  +P     +I+TCKVC TRS KT+ + +Y KGVV+ RC GC N H+IAD+LGWF +     +IE+ LAA+GE+V++
Subjt:  LKMSPRHDLAMIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSIEDFLAARGEEVRK

Q5SXM8 DNL-type zinc finger protein

1.7e-13

46.25

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Query:  MIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSIEDFLAARGEEV-RKGSVDSLSLTLD
        +++TCKVC TRS K + + +Y +GVV+  C GC N H+IAD+LGWF +     +IE+ L ARGE+V R     +L L L+
Subjt:  MIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSIEDFLAARGEEV-RKGSVDSLSLTLD

Q9D113 DNL-type zinc finger protein

9.0e-15

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Query:  MIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSIEDFLAARGEEVRKGSVD-SLSLTLD
        +++TCKVC TRS K + + +Y +GVV+  C GC N H+IAD+L WF +     +IE+ LAARGEEVR+ S D +L L L+
Subjt:  MIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSIEDFLAARGEEVRKGSVD-SLSLTLD

Arabidopsis top hits

e value

%identity

Alignment

AT1G68730.1 Zim17-type zinc finger protein

2.4e-07

36.78

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Query:  EDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLG
        +D+KL P          E++NDSA V      ++K+ PR  L + FTC  C  R+ + + R +YEKG+V  +C GC   H + D+LG
Subjt:  EDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRSSYEKGVVVARCGGCNNLHLIADHLG

AT3G54826.1 Zim17-type zinc finger protein

4.3e-36

51.59

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Query:  ANSRFLTGHRFLRRGNQTIANPAVA-EDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRSSYEKGV
        +NS F   H + R   + ++    A E S  N  N     ++S         ++   VKY   S LK++PRHD  M+FTCKVC+TRS+K   R SYE GV
Subjt:  ANSRFLTGHRFLRRGNQTIANPAVA-EDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRSSYEKGV

Query:  VVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKK
        VV RCGGC+NLHLIAD  GWFGEPGS+EDFLA++GEE +KGS+DSL+LT +DLAG K
Subjt:  VVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKK

Sequences

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CDS sequence

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ATGGCAGTGTGCACTTGCCAAATCCACCCTTTTGCAAATTCACGCTTCTTGACCGGACACAGATTTTTGAGAAGAGGAAATCAGACCATCGCAAATCCAGCAGTTGCTGA
GGATTCTAAAGACAATGAAGATAATAAGCTGCAGCCCGTTTCTGACTCAATCGATCCCCTTGATCAGGAAAAGAACAATGATAGTGCTGCTGTGAAGTATTCTGTTCTCT
CCAACTTAAAAATGTCCCCTAGGCATGACCTTGCCATGATATTCACTTGCAAAGTGTGTGAGACTAGATCAATCAAGACAGTTTGCCGCTCATCATACGAGAAGGGCGTG
GTAGTGGCCCGTTGCGGTGGATGCAACAACCTACACCTGATTGCAGACCATCTGGGGTGGTTTGGCGAGCCTGGCAGCATCGAAGACTTCCTGGCTGCTCGTGGTGAGGA
AGTCCGAAAAGGTTCTGTTGATTCACTGAGTCTTACACTTGATGATTTGGCTGGAAAGAAATCC

mRNA sequence

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Protein sequence

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MAVCTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNEDNKLQPVSDSIDPLDQEKNNDSAAVKYSVLSNLKMSPRHDLAMIFTCKVCETRSIKTVCRSSYEKGV
VVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDLAGKKS

MS004219 (gene) of Bitter gourd (TR) v1 genome