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MS004223 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004223
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome c oxidase assembly protein cox16
Genome locationscaffold92:936564..937449
RNA-Seq ExpressionMS004223
SyntenyMS004223
Gene Ontology termsGO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR020164 - Cytochrome c oxidase assembly protein COX16


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142437.1 uncharacterized protein LOC101208712 isoform X1 [Cucumis sativus]1.3e-5888.55Show/hide
Query:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI
        MTS E GM QS EP KISSA+N  RASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGP+DAYKPKNI
Subjt:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI

Query:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS
        SLEEELRALQ+KV+IN+YEYKRIPKP+ RTS
Subjt:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS

XP_008446874.1 PREDICTED: uncharacterized protein LOC103489460 isoform X1 [Cucumis melo]2.9e-5887.79Show/hide
Query:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI
        MTS E GM +S EP KISSA+N ARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGP+DAYKPKNI
Subjt:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI

Query:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS
        SLEEELRALQE+V+IN+YEYKRIP+P+ RTS
Subjt:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS

XP_022139046.1 uncharacterized protein LOC111010064 [Momordica charantia]3.8e-6699.24Show/hide
Query:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI
        MTSPEVGM QSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI
Subjt:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI

Query:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS
        SLEEELRALQEKVNINDYEYKRIPKPSGRTS
Subjt:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS

XP_022956367.1 uncharacterized protein LOC111458129 [Cucurbita moschata]4.2e-5787.79Show/hide
Query:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI
        MTS E GM QS E  K  SA N AR+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGP+DAYKPKNI
Subjt:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI

Query:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS
        SLEEELRALQEKV+IN+YEYKRIPKP+ RTS
Subjt:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS

XP_038891357.1 uncharacterized protein LOC120080793 isoform X2 [Benincasa hispida]3.2e-5786.26Show/hide
Query:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI
        MTS E G+ QS EP KI+S  N  RASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKV+DDQEWEITEMRKALSRTGP+DAYKPKNI
Subjt:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI

Query:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS
        SLEEELRALQEKV+IN+YEYKRIPKP+ +TS
Subjt:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS

TrEMBL top hitse value%identityAlignment
A0A1S4DWC3 uncharacterized protein LOC103489460 isoform X11.4e-5887.79Show/hide
Query:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI
        MTS E GM +S EP KISSA+N ARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGP+DAYKPKNI
Subjt:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI

Query:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS
        SLEEELRALQE+V+IN+YEYKRIP+P+ RTS
Subjt:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS

A0A5A7SXX4 Cytochrome c oxidase assembly protein cox165.9e-4977.95Show/hide
Query:  EVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNISLEE
        E GM +S EP KISSA+N ARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGP+DA+   ++ + +
Subjt:  EVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNISLEE

Query:  ELRALQEKVNINDYEYKRIPKPSGRTS
        + +ALQE+V+IN+YEYKRIP+P+ RTS
Subjt:  ELRALQEKVNINDYEYKRIPKPSGRTS

A0A6J1CBH5 uncharacterized protein LOC1110100641.8e-6699.24Show/hide
Query:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI
        MTSPEVGM QSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI
Subjt:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI

Query:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS
        SLEEELRALQEKVNINDYEYKRIPKPSGRTS
Subjt:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS

A0A6J1GWL5 uncharacterized protein LOC1114581292.0e-5787.79Show/hide
Query:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI
        MTS E GM QS E  K  SA N AR+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGP+DAYKPKNI
Subjt:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI

Query:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS
        SLEEELRALQEKV+IN+YEYKRIPKP+ RTS
Subjt:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS

A0A6J1HX89 uncharacterized protein LOC1114686485.9e-5787.02Show/hide
Query:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI
        MTS E G+ QS E  K  SA N AR+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGP+DAYKPKNI
Subjt:  MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNI

Query:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS
        SLEEELRALQEKV+IN+YEYKRIPKP+ RTS
Subjt:  SLEEELRALQEKVNINDYEYKRIPKPSGRTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14145.1 unknown protein8.8e-4569.29Show/hide
Query:  MTSPEVGM--AQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPK
        MT+ E G    +S      ++ T T + S + F+RWGRRHPF+RYGLPMISLTV GA+GLG LLQGSKDIAKVKDDQEWEI E RKALSRTGPVDAYKPK
Subjt:  MTSPEVGM--AQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPK

Query:  NISLEEELRALQEKVNINDYEYKRIPK
        N S+E+EL+A+QEKV+IN YEYK+IPK
Subjt:  NISLEEELRALQEKVNINDYEYKRIPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGCCCCGAAGTAGGAATGGCTCAATCTATGGAGCCGAACAAGATTTCATCGGCCACCAATACAGCTCGAGCGTCCCCATCCATGTTTAGAAGATGGGGCAGAAG
ACACCCATTTATCAGATATGGACTCCCAATGATCTCTCTCACTGTTCTTGGGGCAGTTGGTCTAGGCCATCTCTTGCAAGGAAGTAAAGATATTGCAAAGGTAAAAGATG
ACCAAGAATGGGAGATCACTGAGATGAGAAAAGCTCTATCAAGAACAGGACCTGTTGATGCATATAAGCCGAAAAATATATCTTTGGAAGAGGAGTTAAGGGCTTTACAA
GAAAAGGTAAACATCAACGATTATGAGTACAAGAGAATTCCAAAGCCTAGCGGTCGAACATCG
mRNA sequenceShow/hide mRNA sequence
ATGACCAGCCCCGAAGTAGGAATGGCTCAATCTATGGAGCCGAACAAGATTTCATCGGCCACCAATACAGCTCGAGCGTCCCCATCCATGTTTAGAAGATGGGGCAGAAG
ACACCCATTTATCAGATATGGACTCCCAATGATCTCTCTCACTGTTCTTGGGGCAGTTGGTCTAGGCCATCTCTTGCAAGGAAGTAAAGATATTGCAAAGGTAAAAGATG
ACCAAGAATGGGAGATCACTGAGATGAGAAAAGCTCTATCAAGAACAGGACCTGTTGATGCATATAAGCCGAAAAATATATCTTTGGAAGAGGAGTTAAGGGCTTTACAA
GAAAAGGTAAACATCAACGATTATGAGTACAAGAGAATTCCAAAGCCTAGCGGTCGAACATCG
Protein sequenceShow/hide protein sequence
MTSPEVGMAQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNISLEEELRALQ
EKVNINDYEYKRIPKPSGRTS