; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004228 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004228
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold92:1001310..1001588
RNA-Seq ExpressionMS004228
SyntenyMS004228
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012900.1 hypothetical protein SDJN02_25653 [Cucurbita argyrosperma subsp. argyrosperma]9.3e-3583.52Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQK QQQQSSSKQNLLDK+Q+SDADGET+  ++ VSFG RVL+FCSE LLLLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG

XP_022139281.1 uncharacterized protein LOC111010237 [Momordica charantia]2.7e-4298.9Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG
        MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTN VSFGGRVLDFCSEALLLLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG

XP_022945676.1 uncharacterized protein LOC111449839 [Cucurbita moschata]9.3e-3583.52Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQK QQQQSSSKQNLLDK+Q+SDADGET+  ++ VSFG RVL+FCSE LLLLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG

XP_022967037.1 uncharacterized protein LOC111466560 [Cucurbita maxima]1.3e-3381.32Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQK QQQQSSSKQNLLDK+Q+SDAD ET+  ++ +SFG RVL+FCSE LLLLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG

XP_023541224.1 uncharacterized protein LOC111801454 [Cucurbita pepo subsp. pepo]3.9e-3382.61Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQK-QQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG
        MHLWPSTRIRDSFK AYI+ LEWN HRMKIQK QQQQQSSSKQNLLDK+Q+SDADGET+  ++ VSFG RVL+FCSE LLLLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQK-QQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG

TrEMBL top hitse value%identityAlignment
A0A0A0KRM0 Uncharacterized protein8.0e-3281.91Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASD-ADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCGGD
        MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQK  Q QSSSKQNLLDKE+ASD AD ET+E +  VSFG RVL+F SE   LLSCCYCCYCCGGD
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASD-ADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCGGD

A0A5A7SU31 Uncharacterized protein3.6e-3281.91Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASD-ADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCGGD
        MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQK  Q QSSSKQNLLDKE  SD ADGET++ +  VSFG RVL+F SE L LLSCCYCCYCCGGD
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASD-ADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCGGD

A0A6J1CC78 uncharacterized protein LOC1110102371.3e-4298.9Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG
        MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTN VSFGGRVLDFCSEALLLLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG

A0A6J1G1K0 uncharacterized protein LOC1114498394.5e-3583.52Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQK QQQQSSSKQNLLDK+Q+SDADGET+  ++ VSFG RVL+FCSE LLLLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG

A0A6J1HPM3 uncharacterized protein LOC1114665606.5e-3481.32Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQK QQQQSSSKQNLLDK+Q+SDAD ET+  ++ +SFG RVL+FCSE LLLLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G49015.1 Expressed protein6.5e-1039.56Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG
        MHLWPS ++R+SFK    K+ +    RM   KQ Q   S++Q LL        DG+    + ++S GG     C +  ++LSCCYCC+CCG
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG

AT5G49015.2 Expressed protein6.5e-1039.56Show/hide
Query:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG
        MHLWPS ++R+SFK    K+ +    RM   KQ Q   S++Q LL        DG+    + ++S GG     C +  ++LSCCYCC+CCG
Subjt:  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTATGGCCATCGACAAGGATCAGAGACTCTTTCAAGCATGCTTACATCAAAAAGCTGGAATGGAACCTCCACAGAATGAAAATTCAAAAGCAACAGCAGCAGCA
ATCTTCGAGCAAGCAGAACTTGCTGGATAAAGAACAAGCTTCTGATGCTGATGGCGAAACAGCAGAAAACACGAATCAGGTTTCTTTTGGTGGTCGAGTACTCGATTTCT
GCTCAGAAGCCCTGCTTCTTCTCTCCTGTTGTTACTGCTGCTATTGCTGCGGAGGTGAT
mRNA sequenceShow/hide mRNA sequence
ATGCATCTATGGCCATCGACAAGGATCAGAGACTCTTTCAAGCATGCTTACATCAAAAAGCTGGAATGGAACCTCCACAGAATGAAAATTCAAAAGCAACAGCAGCAGCA
ATCTTCGAGCAAGCAGAACTTGCTGGATAAAGAACAAGCTTCTGATGCTGATGGCGAAACAGCAGAAAACACGAATCAGGTTTCTTTTGGTGGTCGAGTACTCGATTTCT
GCTCAGAAGCCCTGCTTCTTCTCTCCTGTTGTTACTGCTGCTATTGCTGCGGAGGTGAT
Protein sequenceShow/hide protein sequence
MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASDADGETAENTNQVSFGGRVLDFCSEALLLLSCCYCCYCCGGD