; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004242 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004242
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontetraspanin-6
Genome locationscaffold92:1107550..1108600
RNA-Seq ExpressionMS004242
SyntenyMS004242
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018499 - Tetraspanin/Peripherin
IPR044991 - Tetraspani, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138970.1 tetraspanin-6-like isoform X1 [Momordica charantia]4.9e-15398.17Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNV WALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPI----QSGCCKPPTACNYETAAMAAQDPDCYRWNNAGN
        VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPI    QSGCCKPPTACNYETAAMAAQDPDCYRWNNAGN
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPI----QSGCCKPPTACNYETAAMAAQDPDCYRWNNAGN

Query:  VLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
        VLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
Subjt:  VLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY

XP_022138971.1 tetraspanin-6-like isoform X2 [Momordica charantia]9.0e-15599.63Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNV WALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY
        VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY

Query:  ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
        ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
Subjt:  ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY

XP_022991334.1 tetraspanin-6 [Cucurbita maxima]4.5e-14692.28Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYE---TAAMAAQDPDCYRWNNAGNV
        VEAPGGRVYREYHLE+YS WLR R+KDPRYW+TIRSC+LGS+TCAKLASWTPLDYLERDMTPIQSGCCKPPTACNY+     A+ AQDPDCYRWNNA N+
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYE---TAAMAAQDPDCYRWNNAGNV

Query:  LCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
        LCYEC+SCKAGVLE VRRDWHKLSVLNVVVVVLLIGVYS+GCCAFRNTKRAE+DYPYGHNRMTKVRPRWDYY
Subjt:  LCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY

XP_023544308.1 tetraspanin-6 [Cucurbita pepo subsp. pepo]5.8e-14691.97Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYE-----TAAMAAQDPDCYRWNNAG
        VEAPGGRVYREYHLE+YS WLR R+KDPRYW+TIRSC+LGS+TCAKLASWTPLDYLERDMTPIQSGCCKPPTACNY+       A+ AQDPDCYRWNNA 
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYE-----TAAMAAQDPDCYRWNNAG

Query:  NVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
        N+LCYEC+SCKAGVLE VRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAE+DYPYGHNRMTKVRPRWDYY
Subjt:  NVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY

XP_038891767.1 tetraspanin-6 [Benincasa hispida]4.8e-14894.42Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY
        +EAPGGRVYREYHLE+YS WLR RIKDPRYWLTIRSCLLGS+TCAKLASWTPLDYLERDMTPIQSGCCKPPTACNY+  AM AQDPDCYRWNNA N+LCY
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY

Query:  ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
        EC+SCKAGVLE VRRDWHKLSVLNVVVVVLLIGVY VGCCAFRNTKRAE+DYPYGHNRMTKVRPRWDYY
Subjt:  ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY

TrEMBL top hitse value%identityAlignment
A0A5A7SW51 Tetraspanin-63.2e-14289.71Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGF+VT  GGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYE---TAAMAAQDPDCYRWNNAGNV
        VEAPGGRVYREYHLE+YS WLR RIKDPRYWLTIRSCLLGS+TCA+LASWTPLDYL+RDM+PIQSGCCKPPTACNY+     AM +QDPDCYRWNNA  +
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYE---TAAMAAQDPDCYRWNNAGNV

Query:  LCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
        LCYEC+SCKAGVLE+VRRDWHKLSVLNVVVV+LLIGVY VGCCAFRNTKRAE+DYPYGHN+MTKVRPRWDYY
Subjt:  LCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY

A0A6J1CB03 tetraspanin-6-like isoform X12.4e-15398.17Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNV WALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPI----QSGCCKPPTACNYETAAMAAQDPDCYRWNNAGN
        VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPI    QSGCCKPPTACNYETAAMAAQDPDCYRWNNAGN
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPI----QSGCCKPPTACNYETAAMAAQDPDCYRWNNAGN

Query:  VLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
        VLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
Subjt:  VLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY

A0A6J1CB91 tetraspanin-6-like isoform X24.3e-15599.63Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNV WALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY
        VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY

Query:  ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
        ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
Subjt:  ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY

A0A6J1GZW8 tetraspanin-61.4e-14591.91Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVML LIATLMGLTIFGFVVTGPGGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYE---TAAMAAQDPDCYRWNNAGNV
        VEAPGGRVYREYHLE+YS WLR R+KDPRYW+TIRSC+LGS+TCAKLASWTPLDYLERDMTPIQSGCCKPPTACNY+     A+ AQDPDCYRWNNA N+
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYE---TAAMAAQDPDCYRWNNAGNV

Query:  LCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
        LCYEC+SCKAGVLE +RRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAE+DYPYGHNRMTKVRPRWDYY
Subjt:  LCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY

A0A6J1JUI8 tetraspanin-62.2e-14692.28Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYE---TAAMAAQDPDCYRWNNAGNV
        VEAPGGRVYREYHLE+YS WLR R+KDPRYW+TIRSC+LGS+TCAKLASWTPLDYLERDMTPIQSGCCKPPTACNY+     A+ AQDPDCYRWNNA N+
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYE---TAAMAAQDPDCYRWNNAGNV

Query:  LCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY
        LCYEC+SCKAGVLE VRRDWHKLSVLNVVVVVLLIGVYS+GCCAFRNTKRAE+DYPYGHNRMTKVRPRWDYY
Subjt:  LCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY

SwissProt top hitse value%identityAlignment
Q84WF6 Tetraspanin-55.9e-10162.17Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGV
        R SNTVIGFLN+ TLI+SI ++G  LWM RS TTCE FLQ PLL++G  +L++S+AG +GAC +VAW LWVYL  M+F+I  LMGLT+FGF+VT   GGV
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGV

Query:  EAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCYE
            GRVY+E+ LE Y  WL+ R+ D  YW+TI++CLLGS TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y T  +  QDPDCYRWNNA  VLCY+
Subjt:  EAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCYE

Query:  CESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAES-DYPYGHNRMTKVRPRWD
        C++C+AGVLE+VRRDWHKLS++NV+VV+ LI VY VGCCAF+N KR +   +PYG   M+K RP W+
Subjt:  CESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAES-DYPYGHNRMTKVRPRWD

Q8S8Q6 Tetraspanin-82.1e-6144.49Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        R SN ++G LN    + SIPI+ GG+W++ + ST CE FL  P++ +G  ++VV++AG IG+C  V W LWVYL VM  LI  +  +T+F FVVT  G G
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYE---------TAAMAAQDPD
         EA  G+ Y+EY L +YS WL+ R+++ + W  IRSCL+ S+ C+KL +     P++ + +  +T +QSGCCKP   C +E                +PD
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYE---------TAAMAAQDPD

Query:  CYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAES
        C  W+NA   LC++C+SCKAG+L++V+  W K++++N+V +V LI VYSVGCCAFRN KR +S
Subjt:  CYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAES

Q9C7C1 Tetraspanin-61.4e-11070Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNTVIG LNL TL+ASIPIIG  L+ ARSSTTCE+FLQTPLLV+GF++L+VSLAGFIGACFNVAWALWVYLVVM+FLIATLMGLT+FG VVT  GGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY
        VE P GR+Y+EY L +Y  WLR R++DP YW +IRSC+L S+TC K+ SWT LDY +RDMT +QSGCCKPPTAC YE A +     DC+RWNN   +LCY
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY

Query:  ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDY-PYGHNRMTKVRPRWDYY
        EC++CKAGVLE +R DW KLSV+N++V+VLLI VY+ GCCAF NT+ A   Y P   NRMT+VRPRWDYY
Subjt:  ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDY-PYGHNRMTKVRPRWDYY

Q9LSS4 Tetraspanin-44.9e-6343.53Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        R  + +IG +N FT + SIPI+GGG+W++   +ST C  FLQ PL+++G  ++V+SLAG  GAC+   + +W+YL  M F+IA L+G TIF +VVT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNY----ET-----AAMAAQ
        G      R Y +Y+L +YS WL++R+ D  YW  I SC+  S  C K+         T   +  R+++P++SGCCKPPT C Y    ET       M   
Subjt:  GVEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNY----ET-----AAMAAQ

Query:  DPDCYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKV
        +PDC  WNN   +LCY+C SCKAGVL S+++ W K+SV+N+VVV++L+  Y + C A++N KR  +D P G  RMT +
Subjt:  DPDCYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKV

Q9M1E7 Tetraspanin-34.9e-6343.93Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        R SN +IG +N  T + SIPI+GGG+W++   +ST C  FLQ PL+V+G  ++VVSLAGF GAC+   + +W+YLVVML +IA L+G  IF + VT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYE---------TAAMAAQ
        G      R Y +Y+LE+YS WL++R+ D  YW  I SCL  S  C K+         T   +  R ++P++SGCCKPPT C +             M   
Subjt:  GVEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYE---------TAAMAAQ

Query:  DPDCYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRP
        + DC  W+N  ++LCY+C SCKAGVL S+++ W K+SV+N+VV+++L+  Y +   A+RN KR ++D P G  RMTK  P
Subjt:  DPDCYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRP

Arabidopsis top hitse value%identityAlignment
AT2G23810.1 tetraspanin81.5e-6244.49Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        R SN ++G LN    + SIPI+ GG+W++ + ST CE FL  P++ +G  ++VV++AG IG+C  V W LWVYL VM  LI  +  +T+F FVVT  G G
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYE---------TAAMAAQDPD
         EA  G+ Y+EY L +YS WL+ R+++ + W  IRSCL+ S+ C+KL +     P++ + +  +T +QSGCCKP   C +E                +PD
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYE---------TAAMAAQDPD

Query:  CYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAES
        C  W+NA   LC++C+SCKAG+L++V+  W K++++N+V +V LI VYSVGCCAFRN KR +S
Subjt:  CYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAES

AT3G12090.1 tetraspanin61.0e-11170Show/hide
Query:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG
        YRFSNTVIG LNL TL+ASIPIIG  L+ ARSSTTCE+FLQTPLLV+GF++L+VSLAGFIGACFNVAWALWVYLVVM+FLIATLMGLT+FG VVT  GGG
Subjt:  YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGG

Query:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY
        VE P GR+Y+EY L +Y  WLR R++DP YW +IRSC+L S+TC K+ SWT LDY +RDMT +QSGCCKPPTAC YE A +     DC+RWNN   +LCY
Subjt:  VEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCY

Query:  ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDY-PYGHNRMTKVRPRWDYY
        EC++CKAGVLE +R DW KLSV+N++V+VLLI VY+ GCCAF NT+ A   Y P   NRMT+VRPRWDYY
Subjt:  ECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDY-PYGHNRMTKVRPRWDYY

AT3G45600.1 tetraspanin33.5e-6443.93Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        R SN +IG +N  T + SIPI+GGG+W++   +ST C  FLQ PL+V+G  ++VVSLAGF GAC+   + +W+YLVVML +IA L+G  IF + VT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYE---------TAAMAAQ
        G      R Y +Y+LE+YS WL++R+ D  YW  I SCL  S  C K+         T   +  R ++P++SGCCKPPT C +             M   
Subjt:  GVEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYE---------TAAMAAQ

Query:  DPDCYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRP
        + DC  W+N  ++LCY+C SCKAGVL S+++ W K+SV+N+VV+++L+  Y +   A+RN KR ++D P G  RMTK  P
Subjt:  DPDCYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRP

AT4G23410.1 tetraspanin54.2e-10262.17Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGV
        R SNTVIGFLN+ TLI+SI ++G  LWM RS TTCE FLQ PLL++G  +L++S+AG +GAC +VAW LWVYL  M+F+I  LMGLT+FGF+VT   GGV
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGV

Query:  EAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCYE
            GRVY+E+ LE Y  WL+ R+ D  YW+TI++CLLGS TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y T  +  QDPDCYRWNNA  VLCY+
Subjt:  EAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCYE

Query:  CESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAES-DYPYGHNRMTKVRPRWD
        C++C+AGVLE+VRRDWHKLS++NV+VV+ LI VY VGCCAF+N KR +   +PYG   M+K RP W+
Subjt:  CESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAES-DYPYGHNRMTKVRPRWD

AT5G60220.1 tetraspanin43.5e-6443.53Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        R  + +IG +N FT + SIPI+GGG+W++   +ST C  FLQ PL+++G  ++V+SLAG  GAC+   + +W+YL  M F+IA L+G TIF +VVT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNY----ET-----AAMAAQ
        G      R Y +Y+L +YS WL++R+ D  YW  I SC+  S  C K+         T   +  R+++P++SGCCKPPT C Y    ET       M   
Subjt:  GVEAPGGRVYREYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNY----ET-----AAMAAQ

Query:  DPDCYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKV
        +PDC  WNN   +LCY+C SCKAGVL S+++ W K+SV+N+VVV++L+  Y + C A++N KR  +D P G  RMT +
Subjt:  DPDCYRWNNAGNVLCYECESCKAGVLESVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACAGATTCAGCAACACAGTGATCGGATTCCTAAACCTCTTCACCCTCATAGCCTCAATCCCCATAATCGGCGGCGGGCTATGGATGGCGAGGAGCAGCACGACGTGCGA
GAGCTTCCTCCAGACGCCGCTGCTTGTGGTTGGTTTCGTCGTCCTCGTCGTCTCGCTCGCTGGCTTCATCGGCGCGTGCTTTAACGTCGCTTGGGCGCTCTGGGTTTACC
TAGTGGTCATGTTGTTTCTCATAGCCACGCTCATGGGGCTCACCATCTTTGGATTTGTCGTCACGGGGCCCGGGGGAGGCGTCGAGGCGCCCGGGGGCCGGGTTTATAGA
GAGTACCACTTGGAGGAGTACTCGGCGTGGCTGAGGAATAGGATTAAGGATCCGAGGTATTGGCTTACCATTAGGAGCTGCCTTTTGGGATCCAGGACTTGTGCTAAACT
TGCCTCTTGGACTCCTCTTGATTATCTTGAGAGGGATATGACCCCAATTCAGTCGGGTTGTTGCAAGCCGCCGACGGCGTGCAACTACGAGACGGCGGCGATGGCGGCGC
AGGACCCGGACTGCTACCGGTGGAACAACGCGGGGAACGTGCTGTGCTACGAGTGCGAGTCGTGCAAGGCGGGGGTGCTGGAGAGCGTGCGGAGGGACTGGCACAAGCTG
TCGGTGCTGAACGTGGTGGTGGTGGTTCTCCTGATCGGCGTCTACTCCGTCGGCTGCTGCGCCTTCCGCAACACCAAGAGGGCCGAATCCGACTACCCCTACGGCCACAA
CCGCATGACCAAAGTCCGACCCAGATGGGACTATTAT
mRNA sequenceShow/hide mRNA sequence
TACAGATTCAGCAACACAGTGATCGGATTCCTAAACCTCTTCACCCTCATAGCCTCAATCCCCATAATCGGCGGCGGGCTATGGATGGCGAGGAGCAGCACGACGTGCGA
GAGCTTCCTCCAGACGCCGCTGCTTGTGGTTGGTTTCGTCGTCCTCGTCGTCTCGCTCGCTGGCTTCATCGGCGCGTGCTTTAACGTCGCTTGGGCGCTCTGGGTTTACC
TAGTGGTCATGTTGTTTCTCATAGCCACGCTCATGGGGCTCACCATCTTTGGATTTGTCGTCACGGGGCCCGGGGGAGGCGTCGAGGCGCCCGGGGGCCGGGTTTATAGA
GAGTACCACTTGGAGGAGTACTCGGCGTGGCTGAGGAATAGGATTAAGGATCCGAGGTATTGGCTTACCATTAGGAGCTGCCTTTTGGGATCCAGGACTTGTGCTAAACT
TGCCTCTTGGACTCCTCTTGATTATCTTGAGAGGGATATGACCCCAATTCAGTCGGGTTGTTGCAAGCCGCCGACGGCGTGCAACTACGAGACGGCGGCGATGGCGGCGC
AGGACCCGGACTGCTACCGGTGGAACAACGCGGGGAACGTGCTGTGCTACGAGTGCGAGTCGTGCAAGGCGGGGGTGCTGGAGAGCGTGCGGAGGGACTGGCACAAGCTG
TCGGTGCTGAACGTGGTGGTGGTGGTTCTCCTGATCGGCGTCTACTCCGTCGGCTGCTGCGCCTTCCGCAACACCAAGAGGGCCGAATCCGACTACCCCTACGGCCACAA
CCGCATGACCAAAGTCCGACCCAGATGGGACTATTAT
Protein sequenceShow/hide protein sequence
YRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYR
EYHLEEYSAWLRNRIKDPRYWLTIRSCLLGSRTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYETAAMAAQDPDCYRWNNAGNVLCYECESCKAGVLESVRRDWHKL
SVLNVVVVVLLIGVYSVGCCAFRNTKRAESDYPYGHNRMTKVRPRWDYY