CuGenDBv2

Gene ID	MS004247
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP synthase subunit d, mitochondrial
Genome location	scaffold92:1155936..1158670
RNA-Seq Expression	MS004247
Synteny	MS004247
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0000274 - mitochondrial proton-transporting ATP synthase, stator stalk (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR008689 - ATP synthase, F0 complex, subunit D, mitochondrial IPR036228 - ATP synthase, F0 complex, subunit D superfamily, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022139222.1 ATP synthase subunit d, mitochondrial [Momordica charantia]

1.5e-86

100

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022945159.1 ATP synthase subunit d, mitochondrial [Cucurbita moschata]

5.7e-83

94.64

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKE+VEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022966719.1 ATP synthase subunit d, mitochondrial [Cucurbita maxima]

2.0e-83

95.24

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+VEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_023541261.1 ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]

8.8e-84

95.83

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+VEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_038893313.1 ATP synthase subunit d, mitochondrial [Benincasa hispida]

1.7e-82

94.05

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGT+KKV +VAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+VEVQEMKKKISTMTADEYF KHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRL4 ATP synthase subunit d, mitochondrial

1.1e-82

93.45

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGT+KKV DVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEAKSLKESERLEKE+ EVQEMKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1B7T1 ATP synthase subunit d, mitochondrial

5.2e-82

92.26

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSG  KKV DVAFKASKNIDW+GMAKLLV+DEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDS+E+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALL+ELKEAE KSLKESERLEKE+ EVQE+KKKISTMTADEYFEKHPEL+KKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1CDD8 ATP synthase subunit d, mitochondrial

7.0e-87

100

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1G072 ATP synthase subunit d, mitochondrial

2.8e-83

94.64

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKE+VEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1HUL8 ATP synthase subunit d, mitochondrial

9.5e-84

95.24

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+VEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

SwissProt top hits

e value

%identity

Alignment

Q9FT52 ATP synthase subunit d, mitochondrial

9.2e-76

82.14

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EF+ LRRAFDEVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIE+PK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+ +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

Arabidopsis top hits

e value

%identity

Alignment

AT3G52300.1 ATP synthase D chain, mitochondrial

6.5e-77

82.14

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EF+ LRRAFDEVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIE+PK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+ +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

AT3G52300.2 ATP synthase D chain, mitochondrial

2.4e-47

78.7

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EF+ LRRAFDEVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIE+PK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDALLV
        PKFDAL++
Subjt:  PKFDALLV

Sequences

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CDS sequence

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ATGAGCGGCACCGTCAAGAAAGTGGCCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCCCGCAAGGAGTT
CGCAACCCTTCGCCGAGCCTTCGATGAGGTTAACTCGACCCTCCAGACCAAGTTTAGCCAGGAACCAGAGCCCATTGACTGGGAATATTATAGAAAGGGAATTGGGTCCC
GCTTGGTGGACATGTACAAAGAGGCTTATGACAGCATTGAGGTCCCCAAATTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTTGATGCGTTGTTGGTAGAATTG
AAGGAAGCTGAAGCGAAATCCCTAAAGGAGTCGGAGCGGTTGGAGAAGGAGGTTGTTGAAGTTCAGGAAATGAAGAAAAAGATCAGCACCATGACTGCTGATGAGTACTT
CGAGAAGCACCCTGAGCTGAGGAAGAAATTCGACGATGAAATCCGAAACGACTACTGGGGCTAT

mRNA sequence

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Protein sequence

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MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVEL
KEAEAKSLKESERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

MS004247 (gene) of Bitter gourd (TR) v1 genome