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MS004280 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004280
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-regulated gene involved in organ size
Genome locationscaffold92:1473694..1473888
RNA-Seq ExpressionMS004280
SyntenyMS004280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU28261.1 hypothetical protein TSUD_118680 [Trifolium subterraneum]3.2e-1378.46Show/hide
Query:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV
        MVRCF L S+L+L A+A SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL++LAFSP+E  V NVVV
Subjt:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV

KAF5742459.1 putative transmembrane protein [Tripterygium wilfordii]2.8e-1476.92Show/hide
Query:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV
        MVRCF++ S++VLAAVA SMVVLPL+LPPLPPPPL+LLFFPVGIM AL+ LAFSP E+  GNVVV
Subjt:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV

KAG2372512.1 uncharacterized protein HKW66_Vig0206190 [Vigna angularis]2.4e-1378.46Show/hide
Query:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV
        MVRCF+L S+L+LAA+A SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL+LLAFSP++   GN VV
Subjt:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV

KAG6601123.1 Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. sororia]4.0e-1687.1Show/hide
Query:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGN
        MVRCFNLVSI VLAAVAVSMVVL LVLPPLPPPP+VLLFFPVG+MAALL+LAFSP++VGV N
Subjt:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGN

OAY53372.1 hypothetical protein MANES_04G157900v8 [Manihot esculenta]2.4e-1378.12Show/hide
Query:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVV
        MVRCF LVS+LVLA +A SMVVLPL+LPPLPPPPL+L+FFPVGIMAAL+ LAFSP E   GNVV
Subjt:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVV

TrEMBL top hitse value%identityAlignment
A0A0L9UI81 Uncharacterized protein1.2e-1378.46Show/hide
Query:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV
        MVRCF+L S+L+LAA+A SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL+LLAFSP++   GN VV
Subjt:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV

A0A0S3SKI1 Uncharacterized protein1.2e-1378.46Show/hide
Query:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV
        MVRCF+L S+L+LAA+A SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL+LLAFSP++   GN VV
Subjt:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV

A0A2C9W2X4 Uncharacterized protein1.2e-1378.12Show/hide
Query:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVV
        MVRCF LVS+LVLA +A SMVVLPL+LPPLPPPPL+L+FFPVGIMAAL+ LAFSP E   GNVV
Subjt:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVV

A0A2Z6M8S1 Uncharacterized protein1.5e-1378.46Show/hide
Query:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV
        MVRCF L S+L+L A+A SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL++LAFSP+E  V NVVV
Subjt:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV

A0A7J7D881 Putative transmembrane protein1.4e-1476.92Show/hide
Query:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV
        MVRCF++ S++VLAAVA SMVVLPL+LPPLPPPPL+LLFFPVGIM AL+ LAFSP E+  GNVVV
Subjt:  MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE7.8e-0753.85Show/hide
Query:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPT
        F+L S+++L  +  S+++LPLVLPPLPPPP +LL  P+GIM  L++LAF P+
Subjt:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPT

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE5.1e-0649.18Show/hide
Query:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV
        F+L S+ +L  +  S+++LPLVLPPLPPPP +LL  P+GIM  L++LAF P+     N  V
Subjt:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE6.6e-0655.77Show/hide
Query:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPT
        F++ S+L+L  V  S+V+LPLVLPPLPPPP +L+  PV ++  LL LAF PT
Subjt:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPT

Q8RXL7 ARGOS-like protein1.0e-0653.85Show/hide
Query:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPT
        F+L S++VL  +  S+++LPL+LPPLPPPP +LL  P+GIM  L++LAF P+
Subjt:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPT

Arabidopsis top hitse value%identityAlignment
AT2G44080.1 ARGOS-like7.2e-0853.85Show/hide
Query:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPT
        F+L S++VL  +  S+++LPL+LPPLPPPP +LL  P+GIM  L++LAF P+
Subjt:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPT

AT3G59900.1 auxin-regulated gene involved in organ size3.6e-0749.18Show/hide
Query:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV
        F+L S+ +L  +  S+++LPLVLPPLPPPP +LL  P+GIM  L++LAF P+     N  V
Subjt:  FNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACGTTGCTTCAACTTAGTGTCCATTCTCGTTCTCGCCGCCGTGGCGGTCTCGATGGTCGTTCTGCCGCTGGTATTGCCGCCGCTGCCTCCGCCGCCGCTAGTGCT
CCTCTTCTTCCCCGTCGGCATCATGGCGGCGTTGCTCCTCCTCGCTTTCTCTCCTACCGAAGTAGGCGTCGGAAACGTCGTCGTA
mRNA sequenceShow/hide mRNA sequence
ATGGTACGTTGCTTCAACTTAGTGTCCATTCTCGTTCTCGCCGCCGTGGCGGTCTCGATGGTCGTTCTGCCGCTGGTATTGCCGCCGCTGCCTCCGCCGCCGCTAGTGCT
CCTCTTCTTCCCCGTCGGCATCATGGCGGCGTTGCTCCTCCTCGCTTTCTCTCCTACCGAAGTAGGCGTCGGAAACGTCGTCGTA
Protein sequenceShow/hide protein sequence
MVRCFNLVSILVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPTEVGVGNVVV