; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004288 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004288
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Genome locationscaffold92:1524590..1527381
RNA-Seq ExpressionMS004288
SyntenyMS004288
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR016488 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446979.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis melo]7.5e-6289.39Show/hide
Query:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP IMDIYNLDDV T+SQLRS++AS+IRKNSH+TDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVG EGLVQD G KDQG+SNFLKNFY+SNYF
Subjt:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF

XP_022139255.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Momordica charantia]1.3e-6699.24Show/hide
Query:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHI DPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
Subjt:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF

XP_022957489.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita moschata]1.7e-6189.39Show/hide
Query:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP IM+IYNLDDV T SQ+RS++AS+IRKNSH+TDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVG EGLVQD+G+KDQGISNFLKNFYKSNYF
Subjt:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF

XP_023552714.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo subsp. pepo]1.1e-6290.91Show/hide
Query:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP IMDIYNLDDV TISQ+RS++AS+IRKNSH+TDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVG EGLVQD+G+KDQGISNFLKNFYKSNYF
Subjt:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF

XP_038892169.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida]5.2e-6391.67Show/hide
Query:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP IMDIYNLDDV T+SQLRS++AS+IRKNSH+TDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVG EGLVQDLG KDQGISNFLKNFYKSNYF
Subjt:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF

TrEMBL top hitse value%identityAlignment
A0A0A0KRV0 Uncharacterized protein1.4e-6189.39Show/hide
Query:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEAR+RVFDFFRSACRSLP IMDIYNLDDVAT+SQLRS++AS+IRKNSH+TDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        YV+G EGLVQD G KDQG SNFLKNFYKSNYF
Subjt:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF

A0A1S3BH79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 63.6e-6289.39Show/hide
Query:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP IMDIYNLDDV T+SQLRS++AS+IRKNSH+TDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVG EGLVQD G KDQG+SNFLKNFY+SNYF
Subjt:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF

A0A6J1CBT6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 66.4e-6799.24Show/hide
Query:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHI DPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
Subjt:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF

A0A6J1H232 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 68.0e-6289.39Show/hide
Query:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP IM+IYNLDDV T SQ+RS++AS+IRKNSH+TDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVG EGLVQD+G+KDQGISNFLKNFYKSNYF
Subjt:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF

A0A6J1JDJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 68.0e-6289.39Show/hide
Query:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP IM+IYNLDDV TIS +RS++AS+IRKNSH+TDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        YVVG EGLVQD+G+KDQGISNFLKNFYKSNYF
Subjt:  YVVGSEGLVQDLGTKDQGISNFLKNFYKSNYF

SwissProt top hitse value%identityAlignment
P56556 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 64.5e-0934.74Show/hide
Query:  TARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHII
        TA     P  S  + EA+ RV + +R+  R +P  +  + LD   T+   R  V     KN+H+TDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  TARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q02366 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 65.3e-1036.36Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  + ++ LD   ++ Q R  V    +KN+HITDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q0MQA4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 64.5e-0934.74Show/hide
Query:  TARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHII
        TA     P  S  + EA+ RV + +R+  R +P  +  + LD   T+   R  V     KN+H+TDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  TARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 69.0e-1037.5Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  L EA+ RV + +R+  R +P  + +  LD   T+ Q R  V     KN+H+TDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9LHI0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.5e-4973.08Show/hide
Query:  FTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F  R + VPPNSA+L EAR RVFDFFR+ACRS+PTIMDIYNL DV   SQLR ++++QIR N+HITDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        VG EGLVQ+ G KDQG ++FLKNFY SNYF
Subjt:  VGSEGLVQDLGTKDQGISNFLKNFYKSNYF

Arabidopsis top hitse value%identityAlignment
AT3G12260.1 LYR family of Fe/S cluster biogenesis protein1.1e-5073.08Show/hide
Query:  FTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F  R + VPPNSA+L EAR RVFDFFR+ACRS+PTIMDIYNL DV   SQLR ++++QIR N+HITDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGSEGLVQDLGTKDQGISNFLKNFYKSNYF
        VG EGLVQ+ G KDQG ++FLKNFY SNYF
Subjt:  VGSEGLVQDLGTKDQGISNFLKNFYKSNYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTCACAGCCCGAGCTCTGAAGGTTCCGCCGAACTCCGCGAGTCTTGAAGAAGCCAGAAATCGAGTTTTCGACTTCTTCAGATCAGCATGTAGATCATTACCAAC
AATCATGGACATCTACAACTTAGACGATGTCGCTACCATTTCTCAGCTCCGCTCCTCCGTCGCCTCCCAGATCCGCAAGAATTCTCACATCACCGACCCTAAGGTGATTG
ATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACCGAACATGCAAAGCAGAGGCATCACATCATTGGTCAGTATGTGGTCGGTAGCGAAGGGCTTGTGCAA
GATTTGGGCACCAAGGATCAGGGCATATCCAATTTTCTCAAAAACTTCTACAAGAGTAACTACTTT
mRNA sequenceShow/hide mRNA sequence
ATGGCATTCACAGCCCGAGCTCTGAAGGTTCCGCCGAACTCCGCGAGTCTTGAAGAAGCCAGAAATCGAGTTTTCGACTTCTTCAGATCAGCATGTAGATCATTACCAAC
AATCATGGACATCTACAACTTAGACGATGTCGCTACCATTTCTCAGCTCCGCTCCTCCGTCGCCTCCCAGATCCGCAAGAATTCTCACATCACCGACCCTAAGGTGATTG
ATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACCGAACATGCAAAGCAGAGGCATCACATCATTGGTCAGTATGTGGTCGGTAGCGAAGGGCTTGTGCAA
GATTTGGGCACCAAGGATCAGGGCATATCCAATTTTCTCAAAAACTTCTACAAGAGTAACTACTTT
Protein sequenceShow/hide protein sequence
MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQIRKNSHITDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGSEGLVQ
DLGTKDQGISNFLKNFYKSNYF