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MS004295 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004295
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCilia-and flagella-associated protein 20
Genome locationscaffold92:1589966..1590276
RNA-Seq ExpressionMS004295
SyntenyMS004295
Gene Ontology termsNA
InterPro domainsIPR007714 - CFA20 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2246071.1 hypothetical protein Bca52824_085699 [Brassica carinata]2.5e-0788.24Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL
        MFKNTFQSGFLSILYSLGSKPLQIWDKE E  H+
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL

KVI00746.1 hypothetical protein Ccrd_021001, partial [Cynara cardunculus var. scolymus]1.5e-0796.67Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGE
        MFKNTFQSGFLSILYSLGSKPLQIWDKEG+
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGE

ONI16820.1 hypothetical protein PRUPE_3G123900 [Prunus persica]3.3e-07100Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEG
        MFKNTFQSGFLSILYSLGSKPLQIWDKEG
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEG

RZB81696.1 Cilia- and flagella-associated protein 20, partial [Glycine soja]3.3e-07100Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEG
        MFKNTFQSGFLSILYSLGSKPLQIWDKEG
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEG

XP_008446984.1 PREDICTED: cilia- and flagella-associated protein 20 isoform X1 [Cucumis melo]1.1e-0793.55Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEF
        MFKNTFQSGFLSIL+SLGSKPLQIWDKEGE+
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEF

TrEMBL top hitse value%identityAlignment
A0A0A0KV68 DUF667 domain-containing protein3.0e-1467.69Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHLLTDVFVLHLL-HNFACLVFENVVMVFLNGMK
        MFKNTFQSGFLSIL+SLGSKPLQIWDKEGE       VF+LHL+  +  CLVFE   + FLNG+K
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHLLTDVFVLHLL-HNFACLVFENVVMVFLNGMK

A0A103Y1D6 Uncharacterized protein (Fragment)7.2e-0896.67Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGE
        MFKNTFQSGFLSILYSLGSKPLQIWDKEG+
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGE

A0A1S3BGZ6 cilia- and flagella-associated protein 20 isoform X15.5e-0893.55Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEF
        MFKNTFQSGFLSIL+SLGSKPLQIWDKEGE+
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEF

A0A251PZ28 DUF667 domain-containing protein1.6e-07100Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEG
        MFKNTFQSGFLSILYSLGSKPLQIWDKEG
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEG

A0A445I6L7 Cilia-and flagella-associated protein 20 (Fragment)1.6e-07100Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEG
        MFKNTFQSGFLSILYSLGSKPLQIWDKEG
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEG

SwissProt top hitse value%identityAlignment
Q499T7 Cilia- and flagella-associated protein 201.1e-0879.41Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL
        MFKNTFQSGFLSILYS+GSKPLQIWDK+    H+
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL

Q6B857 Cilia- and flagella-associated protein 201.1e-0879.41Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL
        MFKNTFQSGFLSILYS+GSKPLQIWDK+    H+
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL

Q6PBJ2 Cilia- and flagella-associated protein 201.1e-0879.41Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL
        MFKNTFQSGFLSILYS+GSKPLQIWDK+    H+
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL

Q8BTU1 Cilia- and flagella-associated protein 201.1e-0879.41Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL
        MFKNTFQSGFLSILYS+GSKPLQIWDK+    H+
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL

Q9Y6A4 Cilia- and flagella-associated protein 201.1e-0879.41Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL
        MFKNTFQSGFLSILYS+GSKPLQIWDK+    H+
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHL

Arabidopsis top hitse value%identityAlignment
AT3G12300.1 unknown protein2.0e-10100Show/hide
Query:  MFKNTFQSGFLSILYSLGSKPLQIWDKE
        MFKNTFQSGFLSILYSLGSKPLQIWDKE
Subjt:  MFKNTFQSGFLSILYSLGSKPLQIWDKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAAAATACGTTTCAGTCCGGATTCCTCTCTATATTATATAGCCTCGGGAGCAAACCCCTTCAGATATGGGACAAAGAAGGTGAGTTTGTTCATCTGCTGACTGA
TGTCTTTGTTTTACATTTGCTTCACAATTTTGCATGTTTGGTGTTCGAGAACGTGGTTATGGTGTTCTTGAATGGTATGAAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCAAAAATACGTTTCAGTCCGGATTCCTCTCTATATTATATAGCCTCGGGAGCAAACCCCTTCAGATATGGGACAAAGAAGGTGAGTTTGTTCATCTGCTGACTGA
TGTCTTTGTTTTACATTTGCTTCACAATTTTGCATGTTTGGTGTTCGAGAACGTGGTTATGGTGTTCTTGAATGGTATGAAG
Protein sequenceShow/hide protein sequence
MFKNTFQSGFLSILYSLGSKPLQIWDKEGEFVHLLTDVFVLHLLHNFACLVFENVVMVFLNGMK