CuGenDBv2

Gene ID	MS004297
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1
Genome location	scaffold92:1603873..1605845
RNA-Seq Expression	MS004297
Synteny	MS004297
Gene Ontology terms	GO:0061635 - regulation of protein complex stability (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domains	IPR038936 - Protein maintenance of PSII under high light 1

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142377.1 protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 [Cucumis sativus]

1.2e-91

80.8

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Query:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
        MACASQ LIA N+CSF S RA++KSQR F Q+  N V TVRASSEDSDCNVDECAPDKEVGK+SMEWLAGEKTKV GTYPPR++GWTGYVEKDTAGQTNI
Subjt:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI

Query:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNT----QLPVQSEPESSSQDNVIAP
        YS+EP VYVAESAISSGTAGSSSEGAENTLA+AGG+AL++VA AS+ILLQVGKKPPEVKTVEYTGPSLSYYINKFNT    Q PVQSEPESSSQ + + P
Subjt:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNT----QLPVQSEPESSSQDNVIAP

Query:  EVTEIQVQSDIVAPEVTDIQVETQ
        +VT+IQ+Q DI APEVTD+QVE+Q
Subjt:  EVTEIQVQSDIVAPEVTDIQVETQ

XP_008446990.1 PREDICTED: uncharacterized protein LOC103489534 [Cucumis melo]

4.8e-93

82.74

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Query:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
        MACASQ LIA N+CSF S RA++KSQR F Q+  N V TVRASSEDSDCNVDECAPDKEVGK+SMEWLAGEKTKV GTYPPR++GWTGYVEKDTAGQTNI
Subjt:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI

Query:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQ---LPVQSEPESSSQDNVIAPE
        YSVEP VYVAESAISSGTAGSSSEGAENTLA+AGG+AL++VAAAS+ILLQVGKKPPEVKTVEYTGPSLSYYINKFNT+    PVQSEPESSSQ + + PE
Subjt:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQ---LPVQSEPESSSQDNVIAPE

Query:  VTEIQVQSDIVAPEVTDIQVETQPVA
        VTEIQ QSDI APEVTDIQVE+Q  A
Subjt:  VTEIQVQSDIVAPEVTDIQVETQPVA

XP_022138876.1 uncharacterized protein LOC111009949 [Momordica charantia]

7.6e-115

99.56

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Query:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
        MACASQALIAPNACSFSSQRAIKKSQRFFYQSC NFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
Subjt:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI

Query:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQLPVQSEPESSSQDNVIAPEVTE
        YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQLPVQSEPESSSQDNVIAPEVTE
Subjt:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQLPVQSEPESSSQDNVIAPEVTE

Query:  IQVQSDIVAPEVTDIQVETQPVASVP
        IQVQSDIVAPEVTDIQVETQPVASVP
Subjt:  IQVQSDIVAPEVTDIQVETQPVASVP

XP_023523079.1 protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 [Cucurbita pepo subsp. pepo]

6.5e-90

80.87

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Query:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
        MACASQALIA N+CSF SQRAI+KSQ+ F QS  N +FTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKV GTYPP+K+GWTGYVEKDTAGQTNI
Subjt:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI

Query:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNT----QLPV----QSEPESSSQDN
        YSVEP VYVAESAISSGTAG+SSEGAENTLA+AGGLAL++VAAAS+ILLQVGKKPPE+K VEYTGPSLSYYINKF T    Q PV    +SEPESSSQ +
Subjt:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNT----QLPV----QSEPESSSQDN

Query:  VIAPE-VTEIQVQSDIVAPE-VTDIQVETQ
         +APE VTE+Q+QSDIVAPE VT++QVE+Q
Subjt:  VIAPE-VTEIQVQSDIVAPE-VTDIQVETQ

XP_038891294.1 protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 [Benincasa hispida]

2.0e-94

83.93

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Query:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
        MACASQALIA N+CSF + +AI+KSQR F QS  N VFTVRASSEDSDCNVDECAPDKEVGK+SMEWLAGEKTKV GTYPPRK+GWTGYVEKDTAGQTNI
Subjt:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI

Query:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFN----TQLPVQSEPESSSQDNVIAP
        YSVEP VYVAESAISSGTAGSSSEGAENTLA+AGG+AL++VAAAS+ILLQVGKKPPEVKTVEYTGPSLSYYINKFN     Q PVQSEPESSSQ N +AP
Subjt:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFN----TQLPVQSEPESSSQDNVIAP

Query:  EVTEIQVQSDIVAPEVTDIQVETQ
        EVTEIQ+QSD  APEVTD+Q E+Q
Subjt:  EVTEIQVQSDIVAPEVTDIQVETQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTT1 Uncharacterized protein

5.7e-92

80.8

Show/hide

Query:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
        MACASQ LIA N+CSF S RA++KSQR F Q+  N V TVRASSEDSDCNVDECAPDKEVGK+SMEWLAGEKTKV GTYPPR++GWTGYVEKDTAGQTNI
Subjt:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI

Query:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNT----QLPVQSEPESSSQDNVIAP
        YS+EP VYVAESAISSGTAGSSSEGAENTLA+AGG+AL++VA AS+ILLQVGKKPPEVKTVEYTGPSLSYYINKFNT    Q PVQSEPESSSQ + + P
Subjt:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNT----QLPVQSEPESSSQDNVIAP

Query:  EVTEIQVQSDIVAPEVTDIQVETQ
        +VT+IQ+Q DI APEVTD+QVE+Q
Subjt:  EVTEIQVQSDIVAPEVTDIQVETQ

A0A1S3BH89 uncharacterized protein LOC103489534

2.3e-93

82.74

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Query:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
        MACASQ LIA N+CSF S RA++KSQR F Q+  N V TVRASSEDSDCNVDECAPDKEVGK+SMEWLAGEKTKV GTYPPR++GWTGYVEKDTAGQTNI
Subjt:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI

Query:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQ---LPVQSEPESSSQDNVIAPE
        YSVEP VYVAESAISSGTAGSSSEGAENTLA+AGG+AL++VAAAS+ILLQVGKKPPEVKTVEYTGPSLSYYINKFNT+    PVQSEPESSSQ + + PE
Subjt:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQ---LPVQSEPESSSQDNVIAPE

Query:  VTEIQVQSDIVAPEVTDIQVETQPVA
        VTEIQ QSDI APEVTDIQVE+Q  A
Subjt:  VTEIQVQSDIVAPEVTDIQVETQPVA

A0A5A7SZM6 Uncharacterized protein

2.3e-93

82.74

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Query:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
        MACASQ LIA N+CSF S RA++KSQR F Q+  N V TVRASSEDSDCNVDECAPDKEVGK+SMEWLAGEKTKV GTYPPR++GWTGYVEKDTAGQTNI
Subjt:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI

Query:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQ---LPVQSEPESSSQDNVIAPE
        YSVEP VYVAESAISSGTAGSSSEGAENTLA+AGG+AL++VAAAS+ILLQVGKKPPEVKTVEYTGPSLSYYINKFNT+    PVQSEPESSSQ + + PE
Subjt:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQ---LPVQSEPESSSQDNVIAPE

Query:  VTEIQVQSDIVAPEVTDIQVETQPVA
        VTEIQ QSDI APEVTDIQVE+Q  A
Subjt:  VTEIQVQSDIVAPEVTDIQVETQPVA

A0A6J1CAZ8 uncharacterized protein LOC111009949

3.7e-115

99.56

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Query:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
        MACASQALIAPNACSFSSQRAIKKSQRFFYQSC NFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
Subjt:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI

Query:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQLPVQSEPESSSQDNVIAPEVTE
        YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQLPVQSEPESSSQDNVIAPEVTE
Subjt:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQLPVQSEPESSSQDNVIAPEVTE

Query:  IQVQSDIVAPEVTDIQVETQPVASVP
        IQVQSDIVAPEVTDIQVETQPVASVP
Subjt:  IQVQSDIVAPEVTDIQVETQPVASVP

A0A6J1GYU9 protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1

4.5e-89

80.87

Show/hide

Query:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI
        MACASQALIA N+CSF SQRA +KSQ+ F QS  N +FTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKV GTYPP+K+GWTGYVEKDTAGQTNI
Subjt:  MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNI

Query:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNT----QLPV----QSEPESSSQDN
        YSVEP VYVAESAISSGTAGSSSEGAENTLA+AGGLAL++VAAAS+ILLQVGKKPPEVK VEYTGPSLSYYINKF T    Q PV    +SEPESSSQ +
Subjt:  YSVEPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNT----QLPV----QSEPESSSQDN

Query:  VIAPE-VTEIQVQSDIVAPE-VTDIQVETQ
         +APE VTE+Q+QSDI APE VT +QVE+Q
Subjt:  VIAPE-VTEIQVQSDIVAPE-VTDIQVETQ

SwissProt top hits

e value

%identity

Alignment

Q9FL44 Protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1

1.1e-55

57.21

Show/hide

Query:  SQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRK-RGWTGYVEKDTAGQTNIYSV
        S  L++PN   F+S + + +           F   VRASS+D+DCN +ECAP+KEVG VSMEWLAGEKTKV GT+PPRK RGWTGYVEKDTAGQTN+YS+
Subjt:  SQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRK-RGWTGYVEKDTAGQTNIYSV

Query:  EPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGK-KPPEVKTVEYTGPSLSYYINKFNTQLPVQSEPESSSQDNVIAPEVTEIQ
        EPAVYVAESAISSGTAGSS++GAENT A+  G+AL++VAAAS+ILLQVGK  P   K V+Y+GPSLSYYINKF     VQ    S ++    AP V E++
Subjt:  EPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGK-KPPEVKTVEYTGPSLSYYINKFNTQLPVQSEPESSSQDNVIAPEVTEIQ

Query:  V---QSDIVAPEVTDI----QVETQPVAS
            ++  VA + T +      E QP AS
Subjt:  V---QSDIVAPEVTDI----QVETQPVAS

Arabidopsis top hits

e value

%identity

Alignment

AT5G07020.1 proline-rich family protein

7.7e-57

57.21

Show/hide

Query:  SQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRK-RGWTGYVEKDTAGQTNIYSV
        S  L++PN   F+S + + +           F   VRASS+D+DCN +ECAP+KEVG VSMEWLAGEKTKV GT+PPRK RGWTGYVEKDTAGQTN+YS+
Subjt:  SQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRK-RGWTGYVEKDTAGQTNIYSV

Query:  EPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGK-KPPEVKTVEYTGPSLSYYINKFNTQLPVQSEPESSSQDNVIAPEVTEIQ
        EPAVYVAESAISSGTAGSS++GAENT A+  G+AL++VAAAS+ILLQVGK  P   K V+Y+GPSLSYYINKF     VQ    S ++    AP V E++
Subjt:  EPAVYVAESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGK-KPPEVKTVEYTGPSLSYYINKFNTQLPVQSEPESSSQDNVIAPEVTEIQ

Query:  V---QSDIVAPEVTDI----QVETQPVAS
            ++  VA + T +      E QP AS
Subjt:  V---QSDIVAPEVTDI----QVETQPVAS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTGTGCTTCACAGGCGCTGATTGCGCCAAATGCATGCTCGTTCTCGAGCCAAAGAGCCATTAAAAAGTCTCAGAGATTCTTCTACCAGAGTTGTTACAATTTCGT
CTTCACGGTCAGAGCTTCCTCTGAAGATTCCGATTGCAATGTCGACGAATGTGCTCCAGATAAAGAGGTGGGGAAAGTAAGTATGGAATGGCTTGCTGGGGAGAAAACTA
AAGTGGCTGGGACATACCCACCAAGGAAAAGAGGGTGGACGGGCTATGTTGAGAAAGACACTGCAGGACAAACAAACATATATTCAGTAGAACCAGCAGTTTACGTAGCA
GAAAGTGCAATAAGCTCGGGAACGGCAGGTTCTTCTTCTGAAGGAGCGGAGAACACATTGGCAGTTGCTGGTGGACTTGCACTCCTTTCAGTTGCTGCAGCTTCAGCTAT
ACTGCTTCAAGTTGGTAAGAAACCACCTGAAGTAAAAACTGTTGAGTACACTGGTCCATCACTCAGCTACTACATTAACAAATTCAATACGCAACTGCCCGTACAAAGCG
AACCCGAATCCTCCTCTCAAGACAACGTCATCGCTCCTGAAGTTACAGAGATTCAAGTTCAATCAGACATTGTTGCTCCTGAAGTAACGGATATTCAAGTTGAAACCCAA
CCTGTGGCCAGTGTCCCG

mRNA sequence

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Protein sequence

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MACASQALIAPNACSFSSQRAIKKSQRFFYQSCYNFVFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVAGTYPPRKRGWTGYVEKDTAGQTNIYSVEPAVYVA
ESAISSGTAGSSSEGAENTLAVAGGLALLSVAAASAILLQVGKKPPEVKTVEYTGPSLSYYINKFNTQLPVQSEPESSSQDNVIAPEVTEIQVQSDIVAPEVTDIQVETQ
PVASVP

MS004297 (gene) of Bitter gourd (TR) v1 genome