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MS004321 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004321
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold92:1807158..1808952
RNA-Seq ExpressionMS004321
SyntenyMS004321
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034106.1 hypothetical protein E6C27_scaffold65G00960 [Cucumis melo var. makuwa]3.7e-5593.5Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF
        VLDKLRRYG+SGILSYGLLNT YYLTTF++VWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDRGLSWFTV YNFESQGKAF
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCFGLALLLFIAVTLLSA
        MAIVGFC GLALLLFI VTLLSA
Subjt:  MAIVGFCFGLALLLFIAVTLLSA

TYK15814.1 uncharacterized protein E5676_scaffold35G003180 [Cucumis melo var. makuwa]3.7e-5593.5Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF
        VLDKLRRYG+SGILSYGLLNT YYLTTF++VWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDRGLSWFTV YNFESQGKAF
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCFGLALLLFIAVTLLSA
        MAIVGFC GLALLLFI VTLLSA
Subjt:  MAIVGFCFGLALLLFIAVTLLSA

XP_008445925.1 PREDICTED: uncharacterized protein LOC103488806 isoform X5 [Cucumis melo]3.7e-5593.5Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF
        VLDKLRRYG+SGILSYGLLNT YYLTTF++VWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDRGLSWFTV YNFESQGKAF
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCFGLALLLFIAVTLLSA
        MAIVGFC GLALLLFI VTLLSA
Subjt:  MAIVGFCFGLALLLFIAVTLLSA

XP_022983937.1 uncharacterized protein LOC111482401 isoform X2 [Cucurbita maxima]1.4e-5491.87Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF
        VLDKLRRYG+SGILSYGLLNTVYYLTTF++VWFYIAPAPAKMGYVAAAGRFLKIMAT+WAGSQVTKLARAAGALA+APFVDRGLSWFTVKYNF+SQGKA 
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCFGLALLLFIAVTLLSA
        +AIVGFC GL+LLLFIAVTLLSA
Subjt:  MAIVGFCFGLALLLFIAVTLLSA

XP_023534257.1 uncharacterized protein LOC111795864 isoform X2 [Cucurbita pepo subsp. pepo]4.1e-5491.87Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF
        VLDKLRRYG+SGILSYGLLNTVYYLTTF++VWFYIAP PAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDRGLSWFTVKYNF+SQGKA 
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCFGLALLLFIAVTLLSA
        +AIVGFC GL+LLLFIAVTLLSA
Subjt:  MAIVGFCFGLALLLFIAVTLLSA

TrEMBL top hitse value%identityAlignment
A0A1S3BDD7 uncharacterized protein LOC103488806 isoform X51.8e-5593.5Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF
        VLDKLRRYG+SGILSYGLLNT YYLTTF++VWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDRGLSWFTV YNFESQGKAF
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCFGLALLLFIAVTLLSA
        MAIVGFC GLALLLFI VTLLSA
Subjt:  MAIVGFCFGLALLLFIAVTLLSA

A0A5A7SW01 Uncharacterized protein1.8e-5593.5Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF
        VLDKLRRYG+SGILSYGLLNT YYLTTF++VWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDRGLSWFTV YNFESQGKAF
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCFGLALLLFIAVTLLSA
        MAIVGFC GLALLLFI VTLLSA
Subjt:  MAIVGFCFGLALLLFIAVTLLSA

A0A5D3CXY6 Uncharacterized protein1.8e-5593.5Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF
        VLDKLRRYG+SGILSYGLLNT YYLTTF++VWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDRGLSWFTV YNFESQGKAF
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCFGLALLLFIAVTLLSA
        MAIVGFC GLALLLFI VTLLSA
Subjt:  MAIVGFCFGLALLLFIAVTLLSA

A0A6J1GY06 uncharacterized protein LOC1114582389.8e-5491.06Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF
        VLDKLRRYG+SGILSYGLLNTVYYLTTF++VWFYIAP PAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDR LSWFTVKYNF+SQGKA 
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCFGLALLLFIAVTLLSA
        +AIVGFC GL+LLLFIAVTLLSA
Subjt:  MAIVGFCFGLALLLFIAVTLLSA

A0A6J1J0R3 uncharacterized protein LOC111482401 isoform X26.8e-5591.87Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF
        VLDKLRRYG+SGILSYGLLNTVYYLTTF++VWFYIAPAPAKMGYVAAAGRFLKIMAT+WAGSQVTKLARAAGALA+APFVDRGLSWFTVKYNF+SQGKA 
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCFGLALLLFIAVTLLSA
        +AIVGFC GL+LLLFIAVTLLSA
Subjt:  MAIVGFCFGLALLLFIAVTLLSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38695.1 unknown protein7.9e-4876.42Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF
        +L KL+RYG+SGILSYGLLNTVYY T F++VWFY+APAP KMGY+AAA RFLK+MA VWAGSQVTKL R  GA+A+AP VDRGLSWFTVK NFESQGKAF
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCFGLALLLFIAVTLLSA
         A+VG C G+AL+LFI VTLL A
Subjt:  MAIVGFCFGLALLLFIAVTLLSA

AT2G38695.2 unknown protein5.0e-2676.39Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAG
        +L KL+RYG+SGILSYGLLNTVYY T F++VWFY+APAP KMGY+AAA RFLK+MA VWAGSQVTKL R  G
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAG

AT2G38695.3 unknown protein5.5e-4154.97Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAG----------------------------
        +L KL+RYG+SGILSYGLLNTVYY T F++VWFY+APAP KMGY+AAA RFLK+MA VWAGSQVTKL R  G                            
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAG----------------------------

Query:  --------------------ALAVAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCFGLALLLFIAVTLLSA
                            A+A+AP VDRGLSWFTVK NFESQGKAF A+VG C G+AL+LFI VTLL A
Subjt:  --------------------ALAVAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCFGLALLLFIAVTLLSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTACTGGATAAATTGAGGAGATATGGAATTTCCGGAATATTGTCTTACGGATTATTAAACACAGTCTACTATCTTACAACATTTGTCATTGTGTGGTTCTACATTGCACC
AGCACCAGCGAAAATGGGTTATGTTGCTGCTGCTGGAAGATTTCTAAAAATAATGGCTACAGTCTGGGCTGGAAGCCAAGTTACTAAGCTTGCAAGAGCTGCAGGGGCTC
TGGCTGTAGCGCCATTCGTTGACAGAGGGTTGTCATGGTTCACGGTCAAATACAACTTCGAGTCTCAGGGGAAGGCATTCATGGCTATTGTTGGATTCTGCTTTGGATTG
GCCCTCTTGTTATTCATTGCTGTGACTCTGCTTTCAGCA
mRNA sequenceShow/hide mRNA sequence
GTACTGGATAAATTGAGGAGATATGGAATTTCCGGAATATTGTCTTACGGATTATTAAACACAGTCTACTATCTTACAACATTTGTCATTGTGTGGTTCTACATTGCACC
AGCACCAGCGAAAATGGGTTATGTTGCTGCTGCTGGAAGATTTCTAAAAATAATGGCTACAGTCTGGGCTGGAAGCCAAGTTACTAAGCTTGCAAGAGCTGCAGGGGCTC
TGGCTGTAGCGCCATTCGTTGACAGAGGGTTGTCATGGTTCACGGTCAAATACAACTTCGAGTCTCAGGGGAAGGCATTCATGGCTATTGTTGGATTCTGCTTTGGATTG
GCCCTCTTGTTATTCATTGCTGTGACTCTGCTTTCAGCA
Protein sequenceShow/hide protein sequence
VLDKLRRYGISGILSYGLLNTVYYLTTFVIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAVAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCFGL
ALLLFIAVTLLSA