CuGenDBv2

Gene ID	MS004322
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RING-type domain-containing protein
Genome location	scaffold92:1825823..1829262
RNA-Seq Expression	MS004322
Synteny	MS004322
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:1902553 - positive regulation of catalase activity (biological process) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component) GO:0005515 - protein binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domains	IPR001841 - Zinc finger, RING-type IPR011990 - Tetratricopeptide-like helical domain superfamily IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR017907 - Zinc finger, RING-type, conserved site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022139165.1 protein NCA1 isoform X1 [Momordica charantia]

5.7e-222

99.5

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKLG
        MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSAR DDASVRKNQ EAESNEAEKDVADAATTGGKCPFGYDSQTFKLG
Subjt:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKLG

Query:  PLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLIQ
        PLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLIQ
Subjt:  PLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLIQ

Query:  QAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKYY
        QAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKYY
Subjt:  QAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKYY

Query:  EGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQKGD
        EGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQKGD
Subjt:  EGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQKGD

Query:  SR
        SR
Subjt:  SR

XP_022945180.1 protein NCA1-like [Cucurbita moschata]

1.1e-201

92.23

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQ-SEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL
        MTPVCPFVKSARPDDASSRKHQPE+ACPFAKSGRSDDASSRKQQ SE++CPFSKSARSDD S++K+Q      EAEKDVADAA TGGKCPFGYDSQTFK+
Subjt:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQ-SEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL

Query:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI
        GPLSCMICQALLFECSRCVPCSHI+CKACISRF DCPLCGADIEKIEAHADLQ TVDRFIEGHARIKRSQ+NSDKEQEEVSESKVVIYED+SMERGAFLI
Subjt:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI

Query:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY
        QQAMRAFRAQN ESAKSRLTICVEDIRDQLER GNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEK+ EVTHTLSVSLNKIGDLKY
Subjt:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY

Query:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK
        YEGDLQAARSYY +SLNVRQDASKHH +DPSQILDVAVSLAKVADVDSGLGNEDMAVNGF+EGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL ERQK
Subjt:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK

XP_022966763.1 protein NCA1 [Cucurbita maxima]

1.7e-202

92.48

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQ-SEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL
        MTPVCPFVKSARPDDASSRKHQPE+ACPFAKSGRSDDASSRKQQ SE++CPFSKSARSDDAS++K+Q      EAEKDVADAA TGGKCPFGYDSQTFK+
Subjt:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQ-SEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL

Query:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI
        GPLSCMICQALLFECSRCVPCSHI+CKACISRF DCPLCGADIEKIEAHADLQ TVDRFIEGHARIKRSQ+NSDKEQEEVSESKVVIYED+SMERGAFLI
Subjt:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI

Query:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY
        QQAMRAFRAQN ESAKSRLTICVEDIRDQLER GNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEK+ EVTHTLSVSLNKIGDLKY
Subjt:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY

Query:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK
        YEGDLQAARSYY +SLNVRQDASKHH +DPSQILDVAVSLAKVADVDSGLGNEDMAVNGF+EGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL ERQK
Subjt:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK

XP_023542121.1 protein NCA1-like [Cucurbita pepo subsp. pepo]

8.6e-202

92.23

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQ-SEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL
        MTPVCPFVKSARPDDASSRKHQPE+ACPFAKSGRSDDASSRKQQ SE++CPFSKSARSDDAS++K+Q      EAEKDVADAA TGGKCPFGYDSQTFK+
Subjt:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQ-SEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL

Query:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI
        GPLSCMICQALLFECSRCVPCSHI+CKACISRF DCPLCGADIEKIEAHADLQ TVDRFIEGHARIKRSQ+NSDKEQEEVSESKVVIYED+SMERGAFLI
Subjt:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI

Query:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY
        QQAMRAFRAQN ESAKSRLTICVEDIRDQLER GNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEK+ EVTHTLSVSLNKIGDLKY
Subjt:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY

Query:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK
        YEGDLQAARSYY +SLNVRQDASKHH +DPSQILDVAVSLAKVADVDSGLGNEDMAVNGF+EGIKLLE+LTLNSENPGLEQRRQSVLKFLEGQL ERQK
Subjt:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK

XP_038893051.1 protein NCA1 [Benincasa hispida]

1.7e-202

92.21

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKLG
        MTPV PFVKSARPDDASSRKHQ E+ACPFAKSGRSDDASSRK QSEAACPFSKS RSDDAS+RK QAEAESN AEKDVADAA TGGKCPFGYDSQTFK+G
Subjt:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKLG

Query:  PLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLIQ
        PLSCMICQALLFECSRCVPCSHI+CKACISRF DCPLCGADIEKIEA A+LQ TVDRFIEGHARIKR QVNSDKEQE+VSESKVVIYEDVSMERGAFLIQ
Subjt:  PLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLIQ

Query:  QAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKYY
        QAMRAFRAQN ESAKSRLT+CVEDIRDQLERMG+SSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLP+K+HE+THTLSVSLNKIGDLKYY
Subjt:  QAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKYY

Query:  EGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK
        EGDLQAARSYY RSLNVRQ+ASKHHPDDP+QILDVAVSLAKVADVDSGLGNEDMAV+ FQEGIKLLESLTLNSENPGL+QRR+SVLKFLEGQL ERQK
Subjt:  EGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPN8 RING-type domain-containing protein

1.4e-197

89.22

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSARSDDA-SVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL
        MTPVCPFVKSARPDDASSRKHQ E+ACPFAKSGRSDDASSRK QSE+ACP SKS RSDDA S++KNQAEAESN AEKDVADAA  GGKCPFGYDSQTFK+
Subjt:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSARSDDA-SVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL

Query:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI
        GPLSCMICQALLFECSRCVPC+HI+CKACISRF DCPLCGADIEKIEA  +LQ TVDRFIEGHARIKR QVNSDKEQE+V+ESKVVIYEDVSMERGAFLI
Subjt:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI

Query:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY
        QQAMRAFRAQN ESAKSRLT+CVEDIRDQLE+MG+S ELCSQLGAVLGTLGDCCRAAGDA+SAIKHFEESVEFLSKLPEK+HE+THTLSVSLNKIGDLKY
Subjt:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY

Query:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK
        YEGDL+AARSYY RSLNVRQDASKHHPDDP+QILDVAVSLAKVADVDSGLGNEDMAV+ FQEGIKLLESL+LNSENP L+ RR+SV+KFLEGQL ERQK
Subjt:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK

A0A5D3CV76 Binding protein

6.8e-197

88.97

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSARSDDA-SVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL
        MTPVCPFVKSARPDDASSRKHQ E+ACPFAKSGRSDDASSRK QSE+ACPFSKS RSDDA S+ KNQAE ESN AEKDV DAA  GGKCPFGYDSQTFK+
Subjt:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSARSDDA-SVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL

Query:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI
        GPLSCMICQALLFECSRCVPCSHI+CKACISRF DCPLCGADIEK+EA  +LQ TVDRFIEGHARIKR QVNSDKEQE+V+ESKVVIYEDVSMERGAFLI
Subjt:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI

Query:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY
        QQAMRAFRAQN ESAKSRLT+CVEDIRDQLE+MG+S ELCSQLGAVLGTLGDCCRAAGDA+SAIKHFEESVEFLSKLPEK+HE+THTLSVSLNKIGDLKY
Subjt:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY

Query:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK
        YEGDL+AARSYY RSLNVRQDASKHHPDDP+QILDVAVSLAKVADVDSGLGNEDMAV+ FQEGIKLLESL+LNSENP L+ R +SVLKFLEGQL ERQK
Subjt:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK

A0A6J1CBV4 protein NCA1 isoform X1

2.8e-222

99.5

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKLG
        MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSAR DDASVRKNQ EAESNEAEKDVADAATTGGKCPFGYDSQTFKLG
Subjt:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKLG

Query:  PLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLIQ
        PLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLIQ
Subjt:  PLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLIQ

Query:  QAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKYY
        QAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKYY
Subjt:  QAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKYY

Query:  EGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQKGD
        EGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQKGD
Subjt:  EGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQKGD

Query:  SR
        SR
Subjt:  SR

A0A6J1G074 protein NCA1-like

5.4e-202

92.23

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQ-SEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL
        MTPVCPFVKSARPDDASSRKHQPE+ACPFAKSGRSDDASSRKQQ SE++CPFSKSARSDD S++K+Q      EAEKDVADAA TGGKCPFGYDSQTFK+
Subjt:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQ-SEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL

Query:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI
        GPLSCMICQALLFECSRCVPCSHI+CKACISRF DCPLCGADIEKIEAHADLQ TVDRFIEGHARIKRSQ+NSDKEQEEVSESKVVIYED+SMERGAFLI
Subjt:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI

Query:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY
        QQAMRAFRAQN ESAKSRLTICVEDIRDQLER GNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEK+ EVTHTLSVSLNKIGDLKY
Subjt:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY

Query:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK
        YEGDLQAARSYY +SLNVRQDASKHH +DPSQILDVAVSLAKVADVDSGLGNEDMAVNGF+EGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL ERQK
Subjt:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK

A0A6J1HT54 protein NCA1

8.4e-203

92.48

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQ-SEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL
        MTPVCPFVKSARPDDASSRKHQPE+ACPFAKSGRSDDASSRKQQ SE++CPFSKSARSDDAS++K+Q      EAEKDVADAA TGGKCPFGYDSQTFK+
Subjt:  MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQ-SEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKL

Query:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI
        GPLSCMICQALLFECSRCVPCSHI+CKACISRF DCPLCGADIEKIEAHADLQ TVDRFIEGHARIKRSQ+NSDKEQEEVSESKVVIYED+SMERGAFLI
Subjt:  GPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLI

Query:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY
        QQAMRAFRAQN ESAKSRLTICVEDIRDQLER GNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEK+ EVTHTLSVSLNKIGDLKY
Subjt:  QQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKY

Query:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK
        YEGDLQAARSYY +SLNVRQDASKHH +DPSQILDVAVSLAKVADVDSGLGNEDMAVNGF+EGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL ERQK
Subjt:  YEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQK

SwissProt top hits

e value

%identity

Alignment

A5WW08 E3 ubiquitin-protein ligase CHFR

1.8e-05

34.72

Show/hide

Query:  LSCMICQALLFECSRCVPCSHIYCKACIS----RFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQ
        L+C+ICQ LL++C    PC H +C AC S    R   CP C   +E+I  +  L   V+ ++  H    R++
Subjt:  LSCMICQALLFECSRCVPCSHIYCKACIS----RFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQ

Q810L3 E3 ubiquitin-protein ligase CHFR

5.3e-05

34.72

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Query:  LSCMICQALLFECSRCVPCSHIYCKACISRFKD----CPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQ
        L+C+ICQ LL +C    PC H +C AC S + +    CP C   +E+I  +  L   V+ ++  H    RS+
Subjt:  LSCMICQALLFECSRCVPCSHIYCKACISRFKD----CPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQ

Q9M2V1 Protein NCA1

1.4e-143

68.43

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Query:  TPVCPFVKSARPDDASSRKHQPEAA--CPFAKSGRSDDASSRKQQSEAA--CPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTF
        T VCPF K+ARPDD S+RK     A  CPF+K+ R DDAS+RKQ    A  CPFSKSAR D+ +  K   E E N   KD  D+AT   KCPFGYDSQTF
Subjt:  TPVCPFVKSARPDDASSRKHQPEAA--CPFAKSGRSDDASSRKQQSEAA--CPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTF

Query:  KLGPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAF
        KLGP SCM+CQALL+E SRCVPC+H++CK C++RFKDCPLCGADIE IE   +LQ  VD+FIEGHARIKRS VN  +++E  +++K VIY DVSMERG+F
Subjt:  KLGPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAF

Query:  LIQQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDL
        L+QQAMRAF AQN+ESAKSRL +C EDIRDQL R GN+ ELCSQLGAVLG LGDC RA GD+SSA+KHFEESVEFL KLP    E+THTLSVSLNKIGDL
Subjt:  LIQQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDL

Query:  KYYEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL
        KYY+ DLQAARSYY R+LNVR+DA KHHP+ PSQILDVAVSLAKVAD+D  L NE  A +GF+EG++LLESL L+SE+  LEQRR SVL+FL+ Q+
Subjt:  KYYEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL

Arabidopsis top hits

e value

%identity

Alignment

AT3G54360.1 zinc ion binding

1.0e-144

68.43

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Query:  TPVCPFVKSARPDDASSRKHQPEAA--CPFAKSGRSDDASSRKQQSEAA--CPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTF
        T VCPF K+ARPDD S+RK     A  CPF+K+ R DDAS+RKQ    A  CPFSKSAR D+ +  K   E E N   KD  D+AT   KCPFGYDSQTF
Subjt:  TPVCPFVKSARPDDASSRKHQPEAA--CPFAKSGRSDDASSRKQQSEAA--CPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTF

Query:  KLGPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAF
        KLGP SCM+CQALL+E SRCVPC+H++CK C++RFKDCPLCGADIE IE   +LQ  VD+FIEGHARIKRS VN  +++E  +++K VIY DVSMERG+F
Subjt:  KLGPLSCMICQALLFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAF

Query:  LIQQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDL
        L+QQAMRAF AQN+ESAKSRL +C EDIRDQL R GN+ ELCSQLGAVLG LGDC RA GD+SSA+KHFEESVEFL KLP    E+THTLSVSLNKIGDL
Subjt:  LIQQAMRAFRAQNFESAKSRLTICVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDL

Query:  KYYEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL
        KYY+ DLQAARSYY R+LNVR+DA KHHP+ PSQILDVAVSLAKVAD+D  L NE  A +GF+EG++LLESL L+SE+  LEQRR SVL+FL+ Q+
Subjt:  KYYEGDLQAARSYYFRSLNVRQDASKHHPDDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTCCTGTTTGTCCGTTCGTGAAATCTGCTCGTCCCGACGACGCTTCTTCGCGGAAGCACCAGCCGGAAGCTGCTTGTCCTTTCGCGAAATCCGGCCGCTCCGATGA
TGCTTCTTCTAGAAAGCAGCAATCGGAGGCTGCTTGTCCGTTTTCGAAATCTGCTCGCTCCGACGATGCTTCTGTGAGGAAGAATCAGGCTGAGGCGGAGAGTAACGAGG
CGGAGAAAGACGTTGCCGATGCTGCTACAACCGGTGGCAAGTGTCCATTCGGATATGATTCTCAAACTTTCAAGCTTGGCCCTCTGAGCTGTATGATATGTCAGGCGCTT
CTCTTTGAATGCAGCAGATGTGTCCCCTGTTCTCACATTTACTGCAAAGCATGTATATCTCGATTTAAAGACTGTCCGCTGTGTGGAGCTGACATTGAGAAGATTGAAGC
CCACGCTGATCTGCAAGGTACGGTTGATCGCTTCATTGAAGGTCATGCGAGAATCAAGAGATCCCAGGTGAACTCAGACAAAGAGCAGGAGGAAGTTAGTGAAAGTAAAG
TAGTAATTTATGAAGACGTGTCCATGGAGAGAGGTGCTTTCTTGATCCAACAAGCCATGAGGGCATTTCGTGCCCAGAATTTTGAAAGTGCCAAATCCAGGCTCACTATC
TGTGTCGAAGATATTCGAGATCAATTAGAAAGAATGGGCAACTCGTCAGAATTATGCTCACAGCTTGGAGCGGTTCTAGGCACACTTGGCGATTGTTGTCGAGCAGCTGG
AGATGCTAGTTCTGCAATCAAGCACTTTGAAGAAAGTGTAGAATTTCTCTCAAAACTGCCTGAAAAGAGTCATGAGGTCACTCATACCCTTTCTGTATCACTTAATAAAA
TTGGCGATCTTAAGTACTATGAAGGAGACCTCCAAGCTGCAAGATCTTATTATTTCCGGTCGCTTAATGTTCGCCAAGATGCTAGCAAGCATCATCCTGACGATCCATCC
CAGATCCTAGATGTGGCTGTTTCGCTTGCAAAAGTTGCAGACGTGGACAGTGGTCTAGGAAATGAGGACATGGCAGTTAATGGATTTCAGGAAGGCATAAAGCTGTTGGA
ATCGTTAACACTGAATTCTGAGAATCCTGGTCTTGAACAGCGACGTCAATCTGTTCTCAAATTCCTTGAAGGTCAACTCACAGAGCGACAAAAAGGCGACTCCAGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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MTPVCPFVKSARPDDASSRKHQPEAACPFAKSGRSDDASSRKQQSEAACPFSKSARSDDASVRKNQAEAESNEAEKDVADAATTGGKCPFGYDSQTFKLGPLSCMICQAL
LFECSRCVPCSHIYCKACISRFKDCPLCGADIEKIEAHADLQGTVDRFIEGHARIKRSQVNSDKEQEEVSESKVVIYEDVSMERGAFLIQQAMRAFRAQNFESAKSRLTI
CVEDIRDQLERMGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKSHEVTHTLSVSLNKIGDLKYYEGDLQAARSYYFRSLNVRQDASKHHPDDPS
QILDVAVSLAKVADVDSGLGNEDMAVNGFQEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLTERQKGDSR

MS004322 (gene) of Bitter gourd (TR) v1 genome