CuGenDBv2

Gene ID	MS004323
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	F-box/LRR-repeat protein At4g29420
Genome location	scaffold92:1833906..1836221
RNA-Seq Expression	MS004323
Synteny	MS004323
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR032675 - Leucine-rich repeat domain superfamily IPR036047 - F-box-like domain superfamily IPR044809 - F-box protein AUF1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022139279.1 F-box/LRR-repeat protein At4g29420 [Momordica charantia]

1.6e-257

99.78

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
        VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQS+ILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
        TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS

Query:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAWGN
        FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAWGN
Subjt:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAWGN

XP_022945179.1 F-box/LRR-repeat protein At4g29420 [Cucurbita moschata]

2.4e-213

83.6

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MDDLPPS+VLEILNRLADSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRAVET+ LV PFKVILK+LMN+F ALDSVSIGVE+SLGRISYEHDD
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
        VEDWSDDL+LTD GFAR+WLPAIG  LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLN+++SLK LTLEFIRLDDEDLS++N+NF
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        PHLE+LNLIGVGGLNEP IHL HL+TCRWTVSNAPVSLSICAP LS+LELKCVKPKSLII+TPMLSDFH  L+DASGLQVNEFPCLRKL+LH P L SLI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
        TTFS ARTIK+LTL T+QRAE+VESVK CLDTLFE FPNL FLKLGPGVLSE ET Y+A G DGR+GMRDLK  H+SL+TYKIELK PFII IL+KCTDS
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS

Query:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW
         DM LLIY NADS    GIMSKR+ NHPRP+WRWELWKEG +E W
Subjt:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW

XP_022966761.1 F-box/LRR-repeat protein At4g29420 [Cucurbita maxima]

2.3e-211

82.7

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MDDLPPS+VLEILNRL+DSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRAVET+ LV PFKVILK+LMN+F ALDSVSIGVE+SLGRISYEHDD
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
        VEDWSDDL+LTD GFAR+WLPAIG  LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLN+++SLK LTLEFIRLDDEDLS++N+NF
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        PHLE+LNLIGVGGLNEP IHL  L+TCRWTVSNAPVSLSICAP LS+LELKCVKPKSLII+TPM+SDFH  L+DASGLQVNEFPCLRKL+LH P L SLI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
        TTFS ARTIK+LTL T+QRAE+VESVK CLDTLFE FPNL FLKLGPGV SE ET Y+A G DGR+GMRDLK  H+SL+TYKIELK PFII IL+KCTDS
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS

Query:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW
          M LLIYHNADS    GIMSKR+ NHPRP+WRWELWKEG +E W
Subjt:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW

XP_023542813.1 F-box/LRR-repeat protein At4g29420 [Cucurbita pepo subsp. pepo]

7.8e-212

82.92

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MDDLPPS+VLEILNRLADSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRAVET+ LV PFKVILK+LMN+F ALDSVSIGVE+SLGRISY HDD
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
        VEDWSDDL+LTD GFAR+WLPAIG  LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLN+++SLK LTLEFIRLDDEDLS++N+NF
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        PHLE+LNLIGVGGLNEP IHL HL+TCRWTVSNAPVSLSICAP LS+LELKCVKPKSLII+TPMLSDFH  L+DASGLQVNEFPCLRKL+LH P L SLI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
        TTFS ARTIK+LTL T+QRAE+VESVK CLDTLFE FPNL FLKLGPGV SE ET Y+A G D R+GMRDLK  H+SL+TYK+ELK PFII IL+KCTDS
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS

Query:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW
         DM LLIYHNADS    GIMSKR+ NHPRP+WRWELWKEG +E W
Subjt:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW

XP_038893164.1 F-box/LRR-repeat protein At4g29420 [Benincasa hispida]

5.7e-215

84.49

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MDDLPP +VLEILNRLADSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRA ETK LVTPFKVILKTLMN+F ALDSVSIGVE+SLGRISYEHDD
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
        VEDWSDDL+LTD G+A++WLPAIG +LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL++M SLK LTLEFIRLDDEDLS++N NF
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        PHLEVLNL+GVGGLNEP IHLLHL+TC+W VSNAPVSLSI AP LS+LELKCVKPKSLIIETPMLSDFH  LEDASGLQVN FPCLRKL LHSP L SLI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
        TTFS ARTIK+LTL T+QRAE++ESVKFCLDT+FE FPNL FLKLGPGVLSE ET Y+A G +GRMGMRDLK  HSSLKTYKIE+K PFIISIL+KCTD 
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS

Query:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW
        FDMALL+YHNADS    GI+ KR+TNHPRPRWRWELWKEGS EAW
Subjt:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DWD1 F-box/LRR-repeat protein At4g29420

1.2e-210

83.82

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MDDLPPS+VLEILNRLADSADLARCRVASK+LNVLSR+VRS+NLFCSLDRYLKSRA ETK LVTPFKVILKTL+N+F ALDSVSIGVE+SLGRISYEHDD
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
        VEDWSDDL+LTD G+A++WLPAIG +LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL++M+SLK LTLEFIRLDDEDLS+LN+NF
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        PHLEVLNLIGVGGLNEP I LLHL+TC+WTVSNAPVSL I AP LS+LELKCVKPK LIIETPMLSDFH  LEDASGLQV+EFPCLRKL LH P L SLI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
        TTFS ARTIK+LTL T+QRAE+VESVKFCLDT+FE FPNL FLKLGPGVLSE ET Y+A G +GRMGMRDLK  HSSLKT KIELK PFII IL+KCTDS
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS

Query:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW
        FDMALL+Y NADS    GIMSKR+ N  RPRWRWELWK+GSREAW
Subjt:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW

A0A5D3CX32 F-box/LRR-repeat protein

1.2e-210

83.82

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MDDLPPS+VLEILNRLADSADLARCRVASK+LNVLSR+VRS+NLFCSLDRYLKSRA ETK LVTPFKVILKTL+N+F ALDSVSIGVE+SLGRISYEHDD
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
        VEDWSDDL+LTD G+A++WLPAIG +LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL++M+SLK LTLEFIRLDDEDLS+LN+NF
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        PHLEVLNLIGVGGLNEP I LLHL+TC+WTVSNAPVSL I AP LS+LELKCVKPK LIIETPMLSDFH  LEDASGLQV+EFPCLRKL LH P L SLI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
        TTFS ARTIK+LTL T+QRAE+VESVKFCLDT+FE FPNL FLKLGPGVLSE ET Y+A G +GRMGMRDLK  HSSLKT KIELK PFII IL+KCTDS
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS

Query:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW
        FDMALL+Y NADS    GIMSKR+ N  RPRWRWELWK+GSREAW
Subjt:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW

A0A6J1CCH4 F-box/LRR-repeat protein At4g29420

7.7e-258

99.78

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
        VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQS+ILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
        TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS

Query:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAWGN
        FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAWGN
Subjt:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAWGN

A0A6J1G095 F-box/LRR-repeat protein At4g29420

1.2e-213

83.6

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MDDLPPS+VLEILNRLADSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRAVET+ LV PFKVILK+LMN+F ALDSVSIGVE+SLGRISYEHDD
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
        VEDWSDDL+LTD GFAR+WLPAIG  LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLN+++SLK LTLEFIRLDDEDLS++N+NF
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        PHLE+LNLIGVGGLNEP IHL HL+TCRWTVSNAPVSLSICAP LS+LELKCVKPKSLII+TPMLSDFH  L+DASGLQVNEFPCLRKL+LH P L SLI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
        TTFS ARTIK+LTL T+QRAE+VESVK CLDTLFE FPNL FLKLGPGVLSE ET Y+A G DGR+GMRDLK  H+SL+TYKIELK PFII IL+KCTDS
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS

Query:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW
         DM LLIY NADS    GIMSKR+ NHPRP+WRWELWKEG +E W
Subjt:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW

A0A6J1HNV0 F-box/LRR-repeat protein At4g29420

1.1e-211

82.7

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MDDLPPS+VLEILNRL+DSADLARCRVASK+LNVLSREVRS+NLFCSLDRYLKSRAVET+ LV PFKVILK+LMN+F ALDSVSIGVE+SLGRISYEHDD
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
        VEDWSDDL+LTD GFAR+WLPAIG  LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGLN+++SLK LTLEFIRLDDEDLS++N+NF
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        PHLE+LNLIGVGGLNEP IHL  L+TCRWTVSNAPVSLSICAP LS+LELKCVKPKSLII+TPM+SDFH  L+DASGLQVNEFPCLRKL+LH P L SLI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS
        TTFS ARTIK+LTL T+QRAE+VESVK CLDTLFE FPNL FLKLGPGV SE ET Y+A G DGR+GMRDLK  H+SL+TYKIELK PFII IL+KCTDS
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDS

Query:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW
          M LLIYHNADS    GIMSKR+ NHPRP+WRWELWKEG +E W
Subjt:  FDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW

SwissProt top hits

e value

%identity

Alignment

Q9M0E1 F-box/LRR-repeat protein At4g29420

7.8e-114

48.55

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MD+LPP + ++IL+R+ DS  LARCRVASK LN LSREVR++NL C+  RYLKSR++    +VTPFK I ++L+ N   + S+S+GV+++L  +S++  +
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
         ED S DLYLTD  F ++WLP +  DL +LSI DFW+QSCWR+S ILALI+S C  L++LE+KNAWLSV GL +M +L+ LTLEFIRLDDE+L K+N  F
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        P L+ LNLIGVGGL EP IH LHL++C WTVSNAP+SL+I AP L  L+LKC KPKSL++ETP L   HLS+EDA G+   EF  L+ LEL SP +  LI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRM-GMRDLKMFHSSLKT---YKIELKFPFIISILDK
        +  S    IK L + +++  E  E ++  L T+ + FP +  L L P   S++ET++++ G  G M G   LK   + ++      +     FI SI++K
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRM-GMRDLKMFHSSLKT---YKIELKFPFIISILDK

Query:  CTDSFDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW
             DM L+I+ + D    S ++S    ++PR RW+W +W EG  + W
Subjt:  CTDSFDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW

Arabidopsis top hits

e value

%identity

Alignment

AT1G78100.1 F-box family protein

1.0e-04

28.19

Show/hide

Query:  DDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK---PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRI----
        D +P  +V++ILNR+ D   L RCR  SK  N L+ +  SL L   LD+ L +   +++   P+ + F+ + K++    P + S     +  L R     
Subjt:  DDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETK---PLVTPFKVILKTLMNNFPALDSVSIGVERSLGRI----

Query:  --------SYEHDDVEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDF
                   + +VE +  D+ L + G A  W    G  L S  IV F
Subjt:  --------SYEHDDVEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDF

AT4G29420.1 F-box/RNI-like superfamily protein

5.5e-115

48.55

Show/hide

Query:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD
        MD+LPP + ++IL+R+ DS  LARCRVASK LN LSREVR++NL C+  RYLKSR++    +VTPFK I ++L+ N   + S+S+GV+++L  +S++  +
Subjt:  MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDD

Query:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF
         ED S DLYLTD  F ++WLP +  DL +LSI DFW+QSCWR+S ILALI+S C  L++LE+KNAWLSV GL +M +L+ LTLEFIRLDDE+L K+N  F
Subjt:  VEDWSDDLYLTDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNF

Query:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI
        P L+ LNLIGVGGL EP IH LHL++C WTVSNAP+SL+I AP L  L+LKC KPKSL++ETP L   HLS+EDA G+   EF  L+ LEL SP +  LI
Subjt:  PHLEVLNLIGVGGLNEPIIHLLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLI

Query:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRM-GMRDLKMFHSSLKT---YKIELKFPFIISILDK
        +  S    IK L + +++  E  E ++  L T+ + FP +  L L P   S++ET++++ G  G M G   LK   + ++      +     FI SI++K
Subjt:  TTFSPARTIKDLTLGTLQRAETVESVKFCLDTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRM-GMRDLKMFHSSLKT---YKIELKFPFIISILDK

Query:  CTDSFDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW
             DM L+I+ + D    S ++S    ++PR RW+W +W EG  + W
Subjt:  CTDSFDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEGSREAW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGATCTTCCGCCATCGATAGTTCTCGAAATCCTGAATCGATTGGCCGATTCCGCCGATTTGGCTCGGTGCCGAGTCGCATCCAAAGCTCTCAATGTTCTCTCCCG
CGAGGTTAGGTCACTGAACCTCTTCTGCTCATTGGATCGCTATCTCAAGTCTAGGGCTGTGGAGACGAAGCCATTGGTGACGCCTTTCAAGGTCATATTGAAGACTCTGA
TGAACAATTTTCCGGCTCTCGATTCTGTGTCGATCGGTGTGGAGAGGTCACTCGGACGGATTTCTTATGAGCACGACGATGTTGAAGATTGGTCCGATGATTTGTACCTG
ACGGATGCTGGCTTCGCTAGGGATTGGCTGCCGGCGATCGGTGGAGATTTAACGTCCTTGTCGATCGTCGATTTTTGGGTTCAATCTTGCTGGAGACAGTCCAAGATTTT
GGCGCTGATTACTTCGTGCTGTCATAATCTTCTGGAACTTGAACTGAAGAATGCTTGGTTGTCAGTGGATGGCTTGAACAAAATGAGTTCCCTCAAACGTTTGACCCTTG
AATTTATAAGGTTAGATGATGAAGATCTGAGCAAGCTTAACCATAACTTCCCTCATCTTGAAGTCCTAAATTTGATAGGGGTTGGAGGCCTAAACGAACCGATAATTCAT
CTGTTGCACCTCGAAACCTGTCGATGGACTGTGTCAAATGCTCCGGTTTCTCTGAGCATTTGCGCACCGAGACTTTCGAGACTTGAACTCAAATGTGTCAAACCAAAATC
TCTGATCATTGAAACTCCAATGCTATCTGATTTCCATCTTTCTCTGGAAGATGCAAGTGGGTTGCAAGTCAATGAATTCCCTTGCTTGAGAAAGCTTGAGCTTCATTCTC
CTAGCCTCTGCAGTCTCATCACAACATTTTCACCTGCAAGAACTATCAAGGATCTCACACTAGGTACACTCCAACGCGCTGAAACCGTTGAATCCGTTAAGTTTTGCCTC
GATACACTGTTTGAAACGTTTCCAAATCTTAGATTTCTTAAACTTGGCCCCGGAGTTCTGTCAGAAGTCGAAACTTATTATCGAGCTGGAGGTTCGGATGGACGGATGGG
GATGAGAGATTTGAAAATGTTTCATAGTAGCCTTAAAACCTACAAGATTGAGTTGAAATTCCCTTTCATCATTTCCATTTTGGACAAATGTACCGATTCCTTCGATATGG
CATTGCTGATCTATCACAATGCTGATTCTGGCTCTGGTAGTGGAATCATGTCAAAACGTTCTACTAATCATCCAAGACCAAGATGGAGATGGGAACTTTGGAAAGAAGGA
TCAAGAGAAGCGTGGGGTAAT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDDLPPSIVLEILNRLADSADLARCRVASKALNVLSREVRSLNLFCSLDRYLKSRAVETKPLVTPFKVILKTLMNNFPALDSVSIGVERSLGRISYEHDDVEDWSDDLYL
TDAGFARDWLPAIGGDLTSLSIVDFWVQSCWRQSKILALITSCCHNLLELELKNAWLSVDGLNKMSSLKRLTLEFIRLDDEDLSKLNHNFPHLEVLNLIGVGGLNEPIIH
LLHLETCRWTVSNAPVSLSICAPRLSRLELKCVKPKSLIIETPMLSDFHLSLEDASGLQVNEFPCLRKLELHSPSLCSLITTFSPARTIKDLTLGTLQRAETVESVKFCL
DTLFETFPNLRFLKLGPGVLSEVETYYRAGGSDGRMGMRDLKMFHSSLKTYKIELKFPFIISILDKCTDSFDMALLIYHNADSGSGSGIMSKRSTNHPRPRWRWELWKEG
SREAWGN

MS004323 (gene) of Bitter gourd (TR) v1 genome