; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004333 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004333
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionG-patch domain-containing protein
Genome locationscaffold92:1913461..1914386
RNA-Seq ExpressionMS004333
SyntenyMS004333
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR039146 - G patch domain and ankyrin repeat-containing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147099.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus]8.4e-3082.56Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QGRLEPVQ SVKNNKRGLGADKVKKK+KET D A SDRKNNQE PP KK K L+KRMRKMQEE+R+FQEKEFE+AFFREFWP+NV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

XP_008445906.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 [Cucumis melo]1.3e-3086.05Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QGRLEPVQ SVKNNKRGLGADKVKKK+KET D AASDRKNNQE PP KK K LSKRMRKMQEE+R+FQEKEFERAFFREFWP+NV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

XP_016900186.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 [Cucumis melo]1.3e-3086.05Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QGRLEPVQ SVKNNKRGLGADKVKKK+KET D AASDRKNNQE PP KK K LSKRMRKMQEE+R+FQEKEFERAFFREFWP+NV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

XP_022138875.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Momordica charantia]2.3e-3596.51Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSK  RKMQEEDRIFQEKEFERAFFREFWPDNV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

XP_022945156.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita moschata]1.1e-2986.05Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QGRLEPVQTSVKNNKRGLGADKVKKKLKET DIAASD K NQE PPSKK KA+SK+MRKM EE+R+F+EKEFERAFFREFWPDNV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

TrEMBL top hitse value%identityAlignment
A0A0A0KPR8 G-patch domain-containing protein4.0e-3082.56Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QGRLEPVQ SVKNNKRGLGADKVKKK+KET D A SDRKNNQE PP KK K L+KRMRKMQEE+R+FQEKEFE+AFFREFWP+NV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

A0A1S3BEH2 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X26.2e-3186.05Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QGRLEPVQ SVKNNKRGLGADKVKKK+KET D AASDRKNNQE PP KK K LSKRMRKMQEE+R+FQEKEFERAFFREFWP+NV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

A0A1S4DW19 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X16.2e-3186.05Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QGRLEPVQ SVKNNKRGLGADKVKKK+KET D AASDRKNNQE PP KK K LSKRMRKMQEE+R+FQEKEFERAFFREFWP+NV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

A0A6J1CAQ8 G patch domain and ankyrin repeat-containing protein 1 homolog1.1e-3596.51Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSK  RKMQEEDRIFQEKEFERAFFREFWPDNV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

A0A6J1G054 G patch domain and ankyrin repeat-containing protein 1 homolog5.3e-3086.05Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QGRLEPVQTSVKNNKRGLGADKVKKKLKET DIAASD K NQE PPSKK KA+SK+MRKM EE+R+F+EKEFERAFFREFWPDNV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52350.1 D111/G-patch domain-containing protein5.4e-1148.28Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADK-VKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QG L P+Q   K+NK+GLGA+K  K+K  +  D A  +         SKK+K LSK++ KM E ++   E EFERAF REFWPDNV
Subjt:  KQGRLEPVQTSVKNNKRGLGADK-VKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

AT5G08535.1 D111/G-patch domain-containing protein1.5e-1351.16Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QG L P+Q   K+NKRG+GA +  K+      +A    K+ +    SK++K LSK+MRKM E ++  QEKEFERAFFREFWPDNV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV

AT5G08535.2 D111/G-patch domain-containing protein1.5e-1351.16Show/hide
Query:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV
        +QG L P+Q   K+NKRG+GA +  K+      +A    K+ +    SK++K LSK+MRKM E ++  QEKEFERAFFREFWPDNV
Subjt:  KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGCAGGGGAGGTTGGAACCCGTACAAACATCTGTAAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTATCGATATTGCAGCCTC
TGACAGGAAAAATAACCAGGAACATCCTCCTTCGAAGAAAACAAAGGCGCTATCGAAAAGGATGAGGAAGATGCAAGAGGAAGATAGGATATTTCAAGAGAAGGAATTTG
AGAGGGCCTTTTTTAGGGAATTTTGGCCAGATAATGTT
mRNA sequenceShow/hide mRNA sequence
AAGCAGGGGAGGTTGGAACCCGTACAAACATCTGTAAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTATCGATATTGCAGCCTC
TGACAGGAAAAATAACCAGGAACATCCTCCTTCGAAGAAAACAAAGGCGCTATCGAAAAGGATGAGGAAGATGCAAGAGGAAGATAGGATATTTCAAGAGAAGGAATTTG
AGAGGGCCTTTTTTAGGGAATTTTGGCCAGATAATGTT
Protein sequenceShow/hide protein sequence
KQGRLEPVQTSVKNNKRGLGADKVKKKLKETIDIAASDRKNNQEHPPSKKTKALSKRMRKMQEEDRIFQEKEFERAFFREFWPDNV