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MS004360 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004360
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSH3 domain-containing protein
Genome locationscaffold92:2218278..2218766
RNA-Seq ExpressionMS004360
SyntenyMS004360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7960020.1 hypothetical protein EAE96_001620 [Botrytis aclada]1.5e-1639.07Show/hide
Query:  PAPDLWPYHIASPAPDLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIASP
        P P L+   + SPAP     HI+ +P+    +Y   + +P   HY  R  S AP+ +  R+ SPAP+ +  RI SPAP+ ++ R+ SPAP+ +  R  SP
Subjt:  PAPDLWPYHIASPAPDLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIASP

Query:  APDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAPD
        AP+ +  R  SPAP+ +  R  SPAPD    R  SPAPD       SP+P+
Subjt:  APDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAPD

MBK7928868.1 hypothetical protein [Bryobacterales bacterium]1.2e-1635.94Show/hide
Query:  ASPAPDLWPYHIASPAPDLCNYHIASSPALDLLYYHIASAAPDLWHYRIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIASP
        A P PD+W    A P PD+     A  P             PD+W    A   PD+W    A P PD+W      P PD+W    A P PD+W    A P
Subjt:  ASPAPDLWPYHIASPAPDLCNYHIASSPALDLLYYHIASAAPDLWHYRIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIASP

Query:  APDLWHCRIASPAPDLWHCRIASPAPDL
         PD+W    A P PD+W    A P PD+
Subjt:  APDLWHCRIASPAPDLWHCRIASPAPDL

TGO26669.1 hypothetical protein BPAE_0055g00400 [Botrytis paeoniae]1.5e-1638.41Show/hide
Query:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS
        P P L+   + SPAP      H++ +P+    +Y   + +P   HY  R  S AP+ +  R+ SPAP+ +  RI SPAP+ ++ R+ SPAP+ +  R  S
Subjt:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS

Query:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP
        PAP+ +  R  SPAPD +  R  SPAPD    R  SP+P+       SPAP
Subjt:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP

THV53096.1 hypothetical protein BGAL_0059g00060 [Botrytis galanthina]1.5e-1638.41Show/hide
Query:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS
        P P L+   + SPAP      H++ +P+    +Y   + +P   HY  R  S AP+ +  R+ SPAP+ +  RI SPAP+ ++ R+ SPAP+ +  R  S
Subjt:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS

Query:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP
        PAP+ +  R  SPAPD +  R  SPAPD    R  SP+P+       SPAP
Subjt:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP

XP_037194990.1 putative variant sh3 domain-containing protein [Botrytis fragariae]1.5e-1638.41Show/hide
Query:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS
        P P L+   + SPAP      H++ +P+    +Y   + +P   HY  R  S AP+ +  R+ SPAP+ +  RI SPAP+ ++ R+ SPAP+ +  R  S
Subjt:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS

Query:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP
        PAP+ +  R  SPAPD +  R  SPAPD    R  SP+P+       SPAP
Subjt:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP

TrEMBL top hitse value%identityAlignment
A0A4V4HVF8 SH3 domain-containing protein7.4e-1738.41Show/hide
Query:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS
        P P L+   + SPAP      H++ +P+    +Y   + +P   HY  R  S AP+ +  R+ SPAP+ +  RI SPAP+ ++ R+ SPAP+ +  R  S
Subjt:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS

Query:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP
        PAP+ +  R  SPAPD +  R  SPAPD    R  SP+P+       SPAP
Subjt:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP

A0A4Z1FUU6 SH3 domain-containing protein7.4e-1738.41Show/hide
Query:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS
        P P L+   + SPAP      H++ +P+    +Y   + +P   HY  R  S AP+ +  R+ SPAP+ +  RI SPAP+ ++ R+ SPAP+ +  R  S
Subjt:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS

Query:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP
        PAP+ +  R  SPAPD +  R  SPAPD    R  SP+P+       SPAP
Subjt:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP

A0A4Z1GTT3 SH3 domain-containing protein3.1e-1537.58Show/hide
Query:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHYRIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIASPA
        P P L+   + SPAP      H++ +P          S  P  +  R  S AP+ +  R+ SPAP+ +  RI SPAP+ ++ R+ SPAP+ +  R  SPA
Subjt:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHYRIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIASPA

Query:  PDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP
        P+ +  R  SPAPD +  R  SPAPD    R  SP+P+       SPAP
Subjt:  PDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP

A0A4Z1J4W0 SH3 domain-containing protein2.2e-1638.41Show/hide
Query:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS
        P P L+   + SPAP      H + +P+    +Y   + +P   HY  R  S AP+ +  R+ SPAP+ +  RI SPAP+ ++ R+ SPAP+ +  R  S
Subjt:  PAPDLWPYHIASPAP-DLCNYHIASSPALDLLYYHIASAAPDLWHY--RIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIAS

Query:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP
        PAP+ +  R  SPAPD +  R  SPAPD    R  SP+P+       SPAP
Subjt:  PAPDLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAP

W9CRX4 SH3 domain-containing protein2.4e-1537.09Show/hide
Query:  WPYHIA---SPAPDLCNYHIASSPALDLLYYHIASAAPDLWHYRIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIASPAPDL
        +P H++   SP+P   N+HI+ +P          S AP+ +  R+ S AP+ +  R  SPAP+ +  R  SPAP+ +  R  SPAP+ +  R  SPAP+ 
Subjt:  WPYHIA---SPAPDLCNYHIASSPALDLLYYHIASAAPDLWHYRIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIASPAPDL

Query:  WHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAPDLCHY
        ++ R  SPAP+ +  R  SPAP+    R+ SPAP+     + SP+P+  HY
Subjt:  WHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAPDLCHY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTCATTTGTGTCACTATCACATTGCATCTCCTGCTCCTGACTTGTGGCCTTATCACATTGCATCTCCTGCTCCTGATTTGTGTAATTATCACATTGCATCATCTCCTGC
TCTTGACTTGTTGTATTATCACATTGCGTCTGCTGCTCCTGACTTGTGGCATTATCGCATTGCGTCTGCTGCTCCTGACTTGTGGCATTATCGCATTGCATCTCCTGCTC
CTGACTTGTGGCGTTGTCGCATTGTGTCTCCGGCTCCTGACTTGTGGCATTATCGCATTGCGTCTCCTGCTCCTGACTTGTGGCATTGTCGCATTGCGTCTCCTGCTCCT
GACTTGTGGCATTGTCGCATTGCGTCTCCTGCTCCTGACTTGTGGCATTGTCGCATTGCATCTCCTGCCCCTGATCTGCGGCATTGTCGCATTGTTTCTCCTGCTCCTGA
TCTGCGGCATTGCCACATTGCTTCTCCTGCTCCTGATCTGTGCCATTAT
mRNA sequenceShow/hide mRNA sequence
CCTCATTTGTGTCACTATCACATTGCATCTCCTGCTCCTGACTTGTGGCCTTATCACATTGCATCTCCTGCTCCTGATTTGTGTAATTATCACATTGCATCATCTCCTGC
TCTTGACTTGTTGTATTATCACATTGCGTCTGCTGCTCCTGACTTGTGGCATTATCGCATTGCGTCTGCTGCTCCTGACTTGTGGCATTATCGCATTGCATCTCCTGCTC
CTGACTTGTGGCGTTGTCGCATTGTGTCTCCGGCTCCTGACTTGTGGCATTATCGCATTGCGTCTCCTGCTCCTGACTTGTGGCATTGTCGCATTGCGTCTCCTGCTCCT
GACTTGTGGCATTGTCGCATTGCGTCTCCTGCTCCTGACTTGTGGCATTGTCGCATTGCATCTCCTGCCCCTGATCTGCGGCATTGTCGCATTGTTTCTCCTGCTCCTGA
TCTGCGGCATTGCCACATTGCTTCTCCTGCTCCTGATCTGTGCCATTAT
Protein sequenceShow/hide protein sequence
PHLCHYHIASPAPDLWPYHIASPAPDLCNYHIASSPALDLLYYHIASAAPDLWHYRIASAAPDLWHYRIASPAPDLWRCRIVSPAPDLWHYRIASPAPDLWHCRIASPAP
DLWHCRIASPAPDLWHCRIASPAPDLRHCRIVSPAPDLRHCHIASPAPDLCHY