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MS004397 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004397
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description11-beta-hydroxysteroid dehydrogenase 1B-like
Genome locationscaffold262:219975..220143
RNA-Seq ExpressionMS004397
SyntenyMS004397
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584163.1 11-beta-hydroxysteroid dehydrogenase 1B, partial [Cucurbita argyrosperma subsp. sororia]7.6e-0871.43Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE
        +FLNL+ PPFTFISLFLLL PY AFKS LS+I  LF++N+  KV+LITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE

KAG7019754.1 11-beta-hydroxysteroid dehydrogenase 1B, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-0871.43Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE
        +FLNL+ PPFTFISLFLLL PY AFKS LS+I  LF++N+  KV+LITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE

XP_022137232.1 11-beta-hydroxysteroid dehydrogenase 1B-like [Momordica charantia]1.4e-0976.79Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE
        SFLNL+ PPFTF+SLFLLL PY A KS LSI+ ALFS+N+A KVILITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE

XP_022923933.1 11-beta-hydroxysteroid dehydrogenase 1B-like [Cucurbita moschata]7.6e-0871.43Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE
        +FLNL+ PPFTFISLFLLL PY AFKS LS+I  LF++N+  KV+LITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE

XP_023001528.1 11-beta-hydroxysteroid dehydrogenase 1B-like [Cucurbita maxima]7.6e-0871.43Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE
        +FLNL+ PPFTFISLFLLL PY AFKS LS+I  LF++N+  KV+LITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE

TrEMBL top hitse value%identityAlignment
A0A0A0LRM4 Uncharacterized protein6.3e-0869.64Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE
        SFLNL++PPFTFISLFLLL PY A KS LS++  LF++N+  KV+LITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE

A0A1S3BEM2 11-beta-hydroxysteroid dehydrogenase 1B-like7.0e-0766.07Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE
        SFLNL++PPFTFI+LFLLL PY A KS LS+   LF++++  KV+LITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE

A0A6J1C7P2 11-beta-hydroxysteroid dehydrogenase 1B-like6.7e-1076.79Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE
        SFLNL+ PPFTF+SLFLLL PY A KS LSI+ ALFS+N+A KVILITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE

A0A6J1EAX4 11-beta-hydroxysteroid dehydrogenase 1B-like3.7e-0871.43Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE
        +FLNL+ PPFTFISLFLLL PY AFKS LS+I  LF++N+  KV+LITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE

A0A6J1KQS8 11-beta-hydroxysteroid dehydrogenase 1B-like3.7e-0871.43Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE
        +FLNL+ PPFTFISLFLLL PY AFKS LS+I  LF++N+  KV+LITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFKS-LSIIFALFSDNIAQKVILITGASSSIGE

SwissProt top hitse value%identityAlignment
A7LB60 11-beta-hydroxysteroid dehydrogenase A4.4e-0657.14Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFK-SLSIIFALFSDNIAQKVILITGASSSIGE
        +FLNL+ PPFTF  L L L PY+  K  +SI+  L S+N+A KV+ ITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFK-SLSIIFALFSDNIAQKVILITGASSSIGE

P0DKC5 11-beta-hydroxysteroid dehydrogenase 1A7.4e-0654.39Show/hide
Query:  SSFLNLLTPPFTFISLFLLLLPYFAFKSLSIIFA-LFSDNIAQKVILITGASSSIGE
        + FLNL  P FTF  L   L P++ FK L  IF+ +FS+N+  KV+LITGASS IGE
Subjt:  SSFLNLLTPPFTFISLFLLLLPYFAFKSLSIIFA-LFSDNIAQKVILITGASSSIGE

P0DKC6 11-beta-hydroxysteroid dehydrogenase 1B7.4e-0654.39Show/hide
Query:  SSFLNLLTPPFTFISLFLLLLPYFAFKSLSIIFA-LFSDNIAQKVILITGASSSIGE
        + FLNL  P FTF  L   L P++ FK L  IF+ +FS+N+  KV+LITGASS IGE
Subjt:  SSFLNLLTPPFTFISLFLLLLPYFAFKSLSIIFA-LFSDNIAQKVILITGASSSIGE

Q93W57 11-beta-hydroxysteroid dehydrogenase A1.1e-0657.14Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAFK-SLSIIFALFSDNIAQKVILITGASSSIGE
        +FLNL+ PPFTF  L   L P+  FK  LSI+  LFS+++A KV++ITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAFK-SLSIIFALFSDNIAQKVILITGASSSIGE

Arabidopsis top hitse value%identityAlignment
AT3G47350.1 hydroxysteroid dehydrogenase 27.1e-0448.21Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAF-KSLSIIFALFSDNIAQKVILITGASSSIGE
        + LN L PP T IS  +L  P++ F K +S +  L  +N+  KV+LITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAF-KSLSIIFALFSDNIAQKVILITGASSSIGE

AT3G47350.2 hydroxysteroid dehydrogenase 27.1e-0448.21Show/hide
Query:  SFLNLLTPPFTFISLFLLLLPYFAF-KSLSIIFALFSDNIAQKVILITGASSSIGE
        + LN L PP T IS  +L  P++ F K +S +  L  +N+  KV+LITGASS IGE
Subjt:  SFLNLLTPPFTFISLFLLLLPYFAF-KSLSIIFALFSDNIAQKVILITGASSSIGE

AT3G47360.1 hydroxysteroid dehydrogenase 34.2e-0450.88Show/hide
Query:  SSFLNLLTPPFTFISLFLLLLPYFAFK-SLSIIFALFSDNIAQKVILITGASSSIGE
        ++ LNLL PP T I LFL    Y   K  L +   L  +N+A+KV+LITGASS IGE
Subjt:  SSFLNLLTPPFTFISLFLLLLPYFAFK-SLSIIFALFSDNIAQKVILITGASSSIGE

AT5G50600.1 hydroxysteroid dehydrogenase 15.3e-0754.39Show/hide
Query:  SSFLNLLTPPFTFISLFLLLLPYFAFKSLSIIFA-LFSDNIAQKVILITGASSSIGE
        + FLNL  P FTF  L   L P++ FK L  IF+ +FS+N+  KV+LITGASS IGE
Subjt:  SSFLNLLTPPFTFISLFLLLLPYFAFKSLSIIFA-LFSDNIAQKVILITGASSSIGE

AT5G50700.1 hydroxysteroid dehydrogenase 15.3e-0754.39Show/hide
Query:  SSFLNLLTPPFTFISLFLLLLPYFAFKSLSIIFA-LFSDNIAQKVILITGASSSIGE
        + FLNL  P FTF  L   L P++ FK L  IF+ +FS+N+  KV+LITGASS IGE
Subjt:  SSFLNLLTPPFTFISLFLLLLPYFAFKSLSIIFA-LFSDNIAQKVILITGASSSIGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAAGCTTCCTCAATTTACTCACTCCACCCTTCACCTTCATTTCGTTATTTCTTCTATTGTTGCCTTATTTCGCTTTTAAATCCCTATCAATCATTTTTGCTCTCTTCAG
TGACAATATTGCCCAAAAGGTCATTCTCATCACTGGAGCTTCCTCGAGCATTGGCGAG
mRNA sequenceShow/hide mRNA sequence
TCAAGCTTCCTCAATTTACTCACTCCACCCTTCACCTTCATTTCGTTATTTCTTCTATTGTTGCCTTATTTCGCTTTTAAATCCCTATCAATCATTTTTGCTCTCTTCAG
TGACAATATTGCCCAAAAGGTCATTCTCATCACTGGAGCTTCCTCGAGCATTGGCGAG
Protein sequenceShow/hide protein sequence
SSFLNLLTPPFTFISLFLLLLPYFAFKSLSIIFALFSDNIAQKVILITGASSSIGE