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MS004409 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004409
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold262:502484..502691
RNA-Seq ExpressionMS004409
SyntenyMS004409
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154925.1 uncharacterized protein LOC111022071 [Momordica charantia]2.5e-1352.78Show/hide
Query:  DDRNNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVLVQ
        +D  N+YVGG+LKG++VP  +++ +L +RL+RL    Q+  DLV+RVPY L   SPP+++T+DDDLRF LVQ
Subjt:  DDRNNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVLVQ

XP_024157296.1 uncharacterized protein LOC112165109 isoform X1 [Rosa chinensis]1.6e-0437.31Show/hide
Query:  NNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVL
        N+TYVGGQ KG+++ + I++  L++R+Y +      E  L+L+  YE  + + P+ + NDDDL F +
Subjt:  NNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVL

XP_038888098.1 uncharacterized protein LOC120078004 [Benincasa hispida]6.0e-0740Show/hide
Query:  DDRNNTYVGGQLKGLLVPQGISFSQLLDRLYRLQS----ECDLVLRVPYELVYSSPPLYLTNDDDLRFVL
        D+  N YVGG+L G++VP  + + +    +YR+ +    E D+V+RV Y+L + +PPLY+ NDDD+   L
Subjt:  DDRNNTYVGGQLKGLLVPQGISFSQLLDRLYRLQS----ECDLVLRVPYELVYSSPPLYLTNDDDLRFVL

XP_038891938.1 uncharacterized protein LOC120081277 isoform X1 [Benincasa hispida]1.0e-0638.57Show/hide
Query:  DDRNNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVL
        D+  ++ + GQL G+LVP  + + ++   +Y +     SE DL+L+V Y+L Y +PP Y+ NDD +RF+L
Subjt:  DDRNNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVL

XP_038891939.1 uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]1.0e-0638.57Show/hide
Query:  DDRNNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVL
        D+  ++ + GQL G+LVP  + + ++   +Y +     SE DL+L+V Y+L Y +PP Y+ NDD +RF+L
Subjt:  DDRNNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVL

TrEMBL top hitse value%identityAlignment
A0A2P6QB68 Putative TIR domain-containing protein7.9e-0537.31Show/hide
Query:  NNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVL
        N+TYVGGQ KG+++ + I++  L++R+Y +      E  L+L+  YE  + + P+ + NDDDL F +
Subjt:  NNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVL

A0A6J1DL08 uncharacterized protein LOC1110220711.2e-1352.78Show/hide
Query:  DDRNNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVLVQ
        +D  N+YVGG+LKG++VP  +++ +L +RL+RL    Q+  DLV+RVPY L   SPP+++T+DDDLRF LVQ
Subjt:  DDRNNTYVGGQLKGLLVPQGISFSQLLDRLYRL----QSECDLVLRVPYELVYSSPPLYLTNDDDLRFVLVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGATAGAAACAATACCTACGTCGGCGGTCAACTGAAAGGATTACTAGTGCCACAGGGTATTTCGTTTAGTCAGTTACTTGACCGTTTGTACAGATTGCAGTCCGAATG
CGATCTCGTCCTCAGAGTTCCTTATGAATTGGTGTACAGTTCGCCCCCATTGTACCTAACGAACGACGACGATCTACGGTTTGTGCTCGTGCAG
mRNA sequenceShow/hide mRNA sequence
GATGATAGAAACAATACCTACGTCGGCGGTCAACTGAAAGGATTACTAGTGCCACAGGGTATTTCGTTTAGTCAGTTACTTGACCGTTTGTACAGATTGCAGTCCGAATG
CGATCTCGTCCTCAGAGTTCCTTATGAATTGGTGTACAGTTCGCCCCCATTGTACCTAACGAACGACGACGATCTACGGTTTGTGCTCGTGCAG
Protein sequenceShow/hide protein sequence
DDRNNTYVGGQLKGLLVPQGISFSQLLDRLYRLQSECDLVLRVPYELVYSSPPLYLTNDDDLRFVLVQ