; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004419 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004419
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold622:74346..75417
RNA-Seq ExpressionMS004419
SyntenyMS004419
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040039.1 hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa]5.2e-2535.32Show/hide
Query:  AGIDISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRK
        +G D  +R++ EAV+ G S     SD+   ++T +  +  K +       + T V+TR   HDDW+ I   +     +     PF ADK LI F+   + 
Subjt:  AGIDISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRK

Query:  DIIGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRIS
         ++ +   W  VG F+VK E W  + H+   V+  YGGWIKV  +PL  W  E F  IG  CGG V ++ ET  L D   A I++K N +GFIP  I++ 
Subjt:  DIIGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRIS

Query:  D
        D
Subjt:  D

KAA0044333.1 hypothetical protein E6C27_scaffold46G00570 [Cucumis melo var. makuwa]2.1e-2629.77Show/hide
Query:  RMQKFKSKFAWFLEWILWPSIGGRKSVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGI
        ++Q+  +K  +  E       G +  +++P G    GW  F ++L      Y +  A      +             T+  T  K++         ++G 
Subjt:  RMQKFKSKFAWFLEWILWPSIGGRKSVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGI

Query:  DISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVRKDDEVL---EMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDI
        D  +R++ EAV+ G S  +    DSW  +T    +K  ++L       + T+V+TR   HDDW+ I   +     +     PF  DK LI F+   + ++
Subjt:  DISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVRKDDEVL---EMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDI

Query:  IGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD
        I +   W  VG F+VK E W+ + H+   V+  YGGWIKV  +PL  W  E F  IG  CGG + ++ ET  L D   A I+VK N SGFIP  I++ D
Subjt:  IGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD

KAA0050054.1 hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]5.5e-2731.41Show/hide
Query:  GRK-SVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGIDISKRTFKEAVMDGISRAAPF
        GRK  +++P G    GW  F ++L      Y +  + +       +T+ R ++      G S  E           +G D  +R++ EAV+ G S     
Subjt:  GRK-SVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGIDISKRTFKEAVMDGISRAAPF

Query:  SDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDIIGQFGHWMKVGNFFVKIEGWHS
        SD+   + T++  +  K +       + T+V+TR   HDDW+ I   +     +     PF ADK LI F+   + ++I +   W  VG F+VK E W+ 
Subjt:  SDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDIIGQFGHWMKVGNFFVKIEGWHS

Query:  EKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD
        + H+   V+  YGGWIKV  +PL  W  E F  IG  CGG + ++ ET  L D   A I++K N SGFIP  I++ D
Subjt:  EKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD

KAA0051807.1 hypothetical protein E6C27_scaffold60G002200 [Cucumis melo var. makuwa]1.3e-2330.3Show/hide
Query:  MQKFKSKFAWFLEWILWPSIGGRKSVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGID
        +QK  +K  +  E       G +  +++P G    GW  F ++L        +D + ++  T  L  D++K   +Y+   +  + +R             
Subjt:  MQKFKSKFAWFLEWILWPSIGGRKSVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGID

Query:  ISKRTFKEAVMDGISRAAPFSDDS--WKNQTSHWVRKDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDIIG
           R++ E V+ G S      +DS  W   T     KD     +  ++T+V+TR   HDDW+ I   ++    +     PF ADK LI F+   + ++I 
Subjt:  ISKRTFKEAVMDGISRAAPFSDDS--WKNQTSHWVRKDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDIIG

Query:  QFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD
        +   W  VG+F+VK E W+ + H+   VV  YGGWI V  L L  W+ E F  IG  CGG + ++ ET  L D   A I+VK N S FIPT I++ D
Subjt:  QFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD

TYK10355.1 hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]1.0e-2533.91Show/hide
Query:  LYTVQGTSKKEQRKLRQNVEMK-------AGIDISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNA
        LY  + +S K   +   N ++K       +G D  +R++ EAV+ G S     SD+   + T++  +  K +       + T+V+TR   HDDW+ I   
Subjt:  LYTVQGTSKKEQRKLRQNVEMK-------AGIDISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNA

Query:  VQVHFSSRCIINPFLADKGLIKFEAARRKDIIGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSE
        +     +     PF ADK LI F+   + ++I +   W  VG F+VK E W+ + H+   V+  YGGWIKV  +PL  W  E F  IG  CGG + ++ E
Subjt:  VQVHFSSRCIINPFLADKGLIKFEAARRKDIIGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSE

Query:  T--LNDSTTAFIQVKPNRSGFIPTSIRISD
        T  L D   A I++K N SGFIP  I++ D
Subjt:  T--LNDSTTAFIQVKPNRSGFIPTSIRISD

TrEMBL top hitse value%identityAlignment
A0A5A7TFK7 DUF4283 domain-containing protein2.5e-2535.32Show/hide
Query:  AGIDISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRK
        +G D  +R++ EAV+ G S     SD+   ++T +  +  K +       + T V+TR   HDDW+ I   +     +     PF ADK LI F+   + 
Subjt:  AGIDISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRK

Query:  DIIGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRIS
         ++ +   W  VG F+VK E W  + H+   V+  YGGWIKV  +PL  W  E F  IG  CGG V ++ ET  L D   A I++K N +GFIP  I++ 
Subjt:  DIIGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRIS

Query:  D
        D
Subjt:  D

A0A5A7TLE2 DUF4283 domain-containing protein1.0e-2629.77Show/hide
Query:  RMQKFKSKFAWFLEWILWPSIGGRKSVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGI
        ++Q+  +K  +  E       G +  +++P G    GW  F ++L      Y +  A      +             T+  T  K++         ++G 
Subjt:  RMQKFKSKFAWFLEWILWPSIGGRKSVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGI

Query:  DISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVRKDDEVL---EMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDI
        D  +R++ EAV+ G S  +    DSW  +T    +K  ++L       + T+V+TR   HDDW+ I   +     +     PF  DK LI F+   + ++
Subjt:  DISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVRKDDEVL---EMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDI

Query:  IGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD
        I +   W  VG F+VK E W+ + H+   V+  YGGWIKV  +PL  W  E F  IG  CGG + ++ ET  L D   A I+VK N SGFIP  I++ D
Subjt:  IGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD

A0A5A7U495 DUF4283 domain-containing protein2.7e-2731.41Show/hide
Query:  GRK-SVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGIDISKRTFKEAVMDGISRAAPF
        GRK  +++P G    GW  F ++L      Y +  + +       +T+ R ++      G S  E           +G D  +R++ EAV+ G S     
Subjt:  GRK-SVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGIDISKRTFKEAVMDGISRAAPF

Query:  SDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDIIGQFGHWMKVGNFFVKIEGWHS
        SD+   + T++  +  K +       + T+V+TR   HDDW+ I   +     +     PF ADK LI F+   + ++I +   W  VG F+VK E W+ 
Subjt:  SDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDIIGQFGHWMKVGNFFVKIEGWHS

Query:  EKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD
        + H+   V+  YGGWIKV  +PL  W  E F  IG  CGG + ++ ET  L D   A I++K N SGFIP  I++ D
Subjt:  EKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD

A0A5D3CFS8 DUF4283 domain-containing protein5.0e-2633.91Show/hide
Query:  LYTVQGTSKKEQRKLRQNVEMK-------AGIDISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNA
        LY  + +S K   +   N ++K       +G D  +R++ EAV+ G S     SD+   + T++  +  K +       + T+V+TR   HDDW+ I   
Subjt:  LYTVQGTSKKEQRKLRQNVEMK-------AGIDISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVR--KDDEVLEMCCDETLVITRSCAHDDWKAISNA

Query:  VQVHFSSRCIINPFLADKGLIKFEAARRKDIIGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSE
        +     +     PF ADK LI F+   + ++I +   W  VG F+VK E W+ + H+   V+  YGGWIKV  +PL  W  E F  IG  CGG + ++ E
Subjt:  VQVHFSSRCIINPFLADKGLIKFEAARRKDIIGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSE

Query:  T--LNDSTTAFIQVKPNRSGFIPTSIRISD
        T  L D   A I++K N SGFIP  I++ D
Subjt:  T--LNDSTTAFIQVKPNRSGFIPTSIRISD

A0A5D3DCX6 DUF4283 domain-containing protein6.2e-2430.3Show/hide
Query:  MQKFKSKFAWFLEWILWPSIGGRKSVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGID
        +QK  +K  +  E       G +  +++P G    GW  F ++L        +D + ++  T  L  D++K   +Y+   +  + +R             
Subjt:  MQKFKSKFAWFLEWILWPSIGGRKSVVIPVGKNMEGWQAFWTMLKTFSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGID

Query:  ISKRTFKEAVMDGISRAAPFSDDS--WKNQTSHWVRKDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDIIG
           R++ E V+ G S      +DS  W   T     KD     +  ++T+V+TR   HDDW+ I   ++    +     PF ADK LI F+   + ++I 
Subjt:  ISKRTFKEAVMDGISRAAPFSDDS--WKNQTSHWVRKDDEVLEMCCDETLVITRSCAHDDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDIIG

Query:  QFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD
        +   W  VG+F+VK E W+ + H+   VV  YGGWI V  L L  W+ E F  IG  CGG + ++ ET  L D   A I+VK N S FIPT I++ D
Subjt:  QFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKE-FEAIGRHCGGLVSISSET--LNDSTTAFIQVKPNRSGFIPTSIRISD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTGAGCAGTTGTCAAATCGATGGACATTTCTTCTGTATTTGGGTTGAACTGGGAAAATTTATGTTAGAAGATGTTAAGTGCAACCTGCTCAGTTCTTGTGGTTT
GAACAATATATGGCTGAGCTTTTTCAGGCACCGATTCCTGCTCGTTTCTTTTATTAGTCGAGATTCACTTGGTCAATGTAGAATGCAAAAATTCAAGTCCAAATTTGCCT
GGTTCTTGGAATGGATACTGTGGCCTTCGATAGGAGGAAGAAAGAGTGTGGTAATTCCAGTGGGTAAGAACATGGAGGGCTGGCAAGCTTTTTGGACAATGCTGAAAACT
TTTTCGGCCAGATATGCAGAGGATCAGGCTCAGCAAATGGAGAAGACGCGCAGGTTGGAAACTGATAGAAGGAAGATGGTTGAATTATATACGGTCCAGGGGACTTCCAA
GAAAGAACAGAGGAAACTTCGTCAGAATGTTGAGATGAAAGCCGGAATTGACATCAGTAAGAGAACGTTCAAAGAGGCAGTTATGGATGGAATCTCTAGAGCTGCTCCAT
TCTCTGATGACTCGTGGAAAAATCAAACAAGTCATTGGGTTAGAAAGGATGATGAGGTTCTGGAAATGTGTTGTGATGAGACTTTAGTGATTACCCGAAGCTGTGCGCAC
GATGATTGGAAAGCAATATCCAACGCAGTCCAAGTTCACTTCTCTTCGAGATGCATAATTAACCCCTTTTTGGCTGACAAAGGGTTAATTAAGTTTGAAGCTGCTAGGCG
GAAGGATATCATCGGACAGTTTGGCCATTGGATGAAGGTAGGGAATTTTTTTGTTAAGATTGAAGGCTGGCATTCTGAAAAGCATAGCCGTGCGGATGTTGTCATTGGGT
ATGGAGGATGGATCAAAGTCCTTGATCTACCTCTGATGTATTGGAGGAAGGAATTTGAAGCCATTGGAAGACACTGTGGTGGGTTGGTAAGTATATCTTCCGAAACACTT
AATGATAGCACGACAGCATTCATCCAAGTCAAACCCAACCGCAGTGGCTTTATTCCCACTTCGATCAGAATAAGTGAT
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTGAGCAGTTGTCAAATCGATGGACATTTCTTCTGTATTTGGGTTGAACTGGGAAAATTTATGTTAGAAGATGTTAAGTGCAACCTGCTCAGTTCTTGTGGTTT
GAACAATATATGGCTGAGCTTTTTCAGGCACCGATTCCTGCTCGTTTCTTTTATTAGTCGAGATTCACTTGGTCAATGTAGAATGCAAAAATTCAAGTCCAAATTTGCCT
GGTTCTTGGAATGGATACTGTGGCCTTCGATAGGAGGAAGAAAGAGTGTGGTAATTCCAGTGGGTAAGAACATGGAGGGCTGGCAAGCTTTTTGGACAATGCTGAAAACT
TTTTCGGCCAGATATGCAGAGGATCAGGCTCAGCAAATGGAGAAGACGCGCAGGTTGGAAACTGATAGAAGGAAGATGGTTGAATTATATACGGTCCAGGGGACTTCCAA
GAAAGAACAGAGGAAACTTCGTCAGAATGTTGAGATGAAAGCCGGAATTGACATCAGTAAGAGAACGTTCAAAGAGGCAGTTATGGATGGAATCTCTAGAGCTGCTCCAT
TCTCTGATGACTCGTGGAAAAATCAAACAAGTCATTGGGTTAGAAAGGATGATGAGGTTCTGGAAATGTGTTGTGATGAGACTTTAGTGATTACCCGAAGCTGTGCGCAC
GATGATTGGAAAGCAATATCCAACGCAGTCCAAGTTCACTTCTCTTCGAGATGCATAATTAACCCCTTTTTGGCTGACAAAGGGTTAATTAAGTTTGAAGCTGCTAGGCG
GAAGGATATCATCGGACAGTTTGGCCATTGGATGAAGGTAGGGAATTTTTTTGTTAAGATTGAAGGCTGGCATTCTGAAAAGCATAGCCGTGCGGATGTTGTCATTGGGT
ATGGAGGATGGATCAAAGTCCTTGATCTACCTCTGATGTATTGGAGGAAGGAATTTGAAGCCATTGGAAGACACTGTGGTGGGTTGGTAAGTATATCTTCCGAAACACTT
AATGATAGCACGACAGCATTCATCCAAGTCAAACCCAACCGCAGTGGCTTTATTCCCACTTCGATCAGAATAAGTGAT
Protein sequenceShow/hide protein sequence
MEVSSCQIDGHFFCIWVELGKFMLEDVKCNLLSSCGLNNIWLSFFRHRFLLVSFISRDSLGQCRMQKFKSKFAWFLEWILWPSIGGRKSVVIPVGKNMEGWQAFWTMLKT
FSARYAEDQAQQMEKTRRLETDRRKMVELYTVQGTSKKEQRKLRQNVEMKAGIDISKRTFKEAVMDGISRAAPFSDDSWKNQTSHWVRKDDEVLEMCCDETLVITRSCAH
DDWKAISNAVQVHFSSRCIINPFLADKGLIKFEAARRKDIIGQFGHWMKVGNFFVKIEGWHSEKHSRADVVIGYGGWIKVLDLPLMYWRKEFEAIGRHCGGLVSISSETL
NDSTTAFIQVKPNRSGFIPTSIRISD