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MS004424 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004424
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold622:171237..171566
RNA-Seq ExpressionMS004424
SyntenyMS004424
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579722.1 hypothetical protein SDJN03_24170, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2457.5Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQS-NYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT----------RN
        MEGLIPMFY+AMKK RIRSQYSVLSP+ AAA+ S ++NIADFYV PP  HV+P + S            AHRRYNSFG  + E+   T          ++
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQS-NYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT----------RN

Query:  GPPPQLVRFRSQRILSCLTG
           PQLVRFRSQRILSCLTG
Subjt:  GPPPQLVRFRSQRILSCLTG
KAG7017165.1 hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-2660Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT------RNGPPPQ
        MEGLIPMFYRAMKK RIRSQYSVLSP+ AAA   ++NIADFYV PP  HV+P + S            AHRRYNSFG  + E+   T      ++   PQ
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT------RNGPPPQ

Query:  LVRFRSQRILSCLTG
        LVRFRSQRILSCLTG
Subjt:  LVRFRSQRILSCLTG
KAG7017171.1 hypothetical protein SDJN02_22283, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2458.33Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQS-NYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT----------RN
        MEGLIPMFYRAMKK RIRSQYSVLSP+ AAA+ S ++NIADFYV PP  HV+P + S            AHRRYNSFG  + E+   T          ++
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQS-NYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT----------RN

Query:  GPPPQLVRFRSQRILSCLTG
           PQLVRFRSQRILSCLTG
Subjt:  GPPPQLVRFRSQRILSCLTG
XP_022929072.1 uncharacterized protein LOC111435769 [Cucurbita moschata]1.2e-2559.48Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT-------RNGPPP
        MEGLIPMFYRAMKK RIRSQYSVLSP+ AAA   ++NIADFYV PP  HV+P + S            AHRRYNSFG  + E+   T       ++   P
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT-------RNGPPP

Query:  QLVRFRSQRILSCLTG
        QLVRFRSQRILSCLTG
Subjt:  QLVRFRSQRILSCLTG
XP_023551320.1 uncharacterized protein LOC111809172 [Cucurbita pepo subsp. pepo]1.2e-2558.47Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT---------RNGP
        MEGLIPMFYRAMKK RIRSQYSVLSP+ AAA+  ++NIADFYV PP  HV+P + S            AHRRYNSFG  + E+   T         ++  
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT---------RNGP

Query:  PPQLVRFRSQRILSCLTG
         PQLVRFRSQRILSCLTG
Subjt:  PPQLVRFRSQRILSCLTG
TrEMBL top hitse value%identityAlignment
A0A0A0LL24 Uncharacterized protein6.6e-1746.4Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAA-----ASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAED--------QANT
        M+GLIP+FYRAMKKNR R QY+VLS    +     A+  ++NIADFYV P               P +   G A+RRYNS+   + ++          ++
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAA-----ASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAED--------QANT

Query:  RNGPPP--QLVRFRSQRILSCLTGH
         +GPPP  QLVRFRSQRILSCLTGH
Subjt:  RNGPPP--QLVRFRSQRILSCLTGH
A0A1S3B4K9 uncharacterized protein LOC1034857491.5e-1646.4Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQS-----NYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT--------
        M+GLIPMFYRAMKKNR R QY+VLS    + S+      ++NIADFYV P               P +   G  +RRYNS+G  + ++   +        
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQS-----NYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT--------

Query:  RNGPPP--QLVRFRSQRILSCLTGH
         +G PP  QLVRFRSQRILSCLTGH
Subjt:  RNGPPP--QLVRFRSQRILSCLTGH
A0A5A7ST27 Uncharacterized protein1.5e-1646.4Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQS-----NYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT--------
        M+GLIPMFYRAMKKNR R QY+VLS    + S+      ++NIADFYV P               P +   G  +RRYNS+G  + ++   +        
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQS-----NYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT--------

Query:  RNGPPP--QLVRFRSQRILSCLTGH
         +G PP  QLVRFRSQRILSCLTGH
Subjt:  RNGPPP--QLVRFRSQRILSCLTGH
A0A6J1ELR2 uncharacterized protein LOC1114357695.9e-2659.48Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT-------RNGPPP
        MEGLIPMFYRAMKK RIRSQYSVLSP+ AAA   ++NIADFYV PP  HV+P + S            AHRRYNSFG  + E+   T       ++   P
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT-------RNGPPP

Query:  QLVRFRSQRILSCLTG
        QLVRFRSQRILSCLTG
Subjt:  QLVRFRSQRILSCLTG
A0A6J1I2E5 uncharacterized protein LOC1114689901.9e-2459.83Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAAS--QSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT------RNGPP
        MEGLIPMFYRAMKK RIRSQYSVLSP+ AAA+    ++NIADFYV PP  HV+P + S        PR  A RRYNSFG  + E+   T      ++   
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAAS--QSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT------RNGPP

Query:  PQLVRFRSQRILSCLTG
        PQLVRFRSQRILSCLTG
Subjt:  PQLVRFRSQRILSCLTG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44010.1 unknown protein3.9e-0633.88Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT-RNG--------P
        M+GLIPM  +A+KKN  R +Y  LS   +A ++ +Y+ A                   +  ++   G  HRR  S G FS+     T RNG         
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANT-RNG--------P

Query:  PP---QLVRFRSQRILSCLTG
        PP   QLVRF+S R+ SC++G
Subjt:  PP---QLVRFRSQRILSCLTG
AT3G59880.1 unknown protein2.6e-0533.59Show/hide
Query:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFY---VKPPPCHVYPKTSSASAAP----DLGPRGGAHRRYNSFGAFSAED-QANTRNGPP
        M+GLIPM ++AM+KNR R +Y  LS   A  ++ +Y+ +DF+    K     V   +SS         D+  R   H R  S G FS+   +   R+G  
Subjt:  MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFY---VKPPPCHVYPKTSSASAAP----DLGPRGGAHRRYNSFGAFSAED-QANTRNGPP

Query:  -----------PQLVRFRSQRILSCLTG
                    QLVR RS R+ SC++G
Subjt:  -----------PQLVRFRSQRILSCLTG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTTTGATTCCGATGTTCTACAGAGCAATGAAGAAAAACAGGATCCGGAGTCAATACTCAGTGCTTTCGCCGGACGTCGCCGCCGCTTCTCAATCTAATTACAA
CATTGCTGACTTCTACGTCAAACCGCCCCCCTGCCACGTCTACCCCAAAACTTCTTCTGCTTCTGCAGCACCAGATCTCGGCCCCCGCGGCGGGGCTCACCGGAGATACA
ACTCCTTCGGCGCTTTCTCTGCGGAGGATCAGGCCAACACCCGCAATGGGCCACCGCCACAGCTTGTCAGGTTCAGGAGCCAGAGAATTCTGTCGTGTCTCACTGGTCAT
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTTTGATTCCGATGTTCTACAGAGCAATGAAGAAAAACAGGATCCGGAGTCAATACTCAGTGCTTTCGCCGGACGTCGCCGCCGCTTCTCAATCTAATTACAA
CATTGCTGACTTCTACGTCAAACCGCCCCCCTGCCACGTCTACCCCAAAACTTCTTCTGCTTCTGCAGCACCAGATCTCGGCCCCCGCGGCGGGGCTCACCGGAGATACA
ACTCCTTCGGCGCTTTCTCTGCGGAGGATCAGGCCAACACCCGCAATGGGCCACCGCCACAGCTTGTCAGGTTCAGGAGCCAGAGAATTCTGTCGTGTCTCACTGGTCAT
Protein sequenceShow/hide protein sequence
MEGLIPMFYRAMKKNRIRSQYSVLSPDVAAASQSNYNIADFYVKPPPCHVYPKTSSASAAPDLGPRGGAHRRYNSFGAFSAEDQANTRNGPPPQLVRFRSQRILSCLTGH