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MS004445 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004445
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationscaffold804:105719..105886
RNA-Seq ExpressionMS004445
SyntenyMS004445
Gene Ontology termsGO:0006470 - protein dephosphorylation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0010119 - regulation of stomatal movement (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0015074 - DNA integration (biological process)
GO:0043622 - cortical microtubule organization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004185 - serine-type carboxypeptidase activity (molecular function)
GO:0004721 - phosphoprotein phosphatase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW43526.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.2e-1067.35Show/hide
Query:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
        L A++KP+ D+ KVF LA+ LGTKY DFR+AMLSKPPYP+Y+QFVL L+
Subjt:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
RVW82530.1 hypothetical protein CK203_046287 [Vitis vinifera]2.2e-1067.35Show/hide
Query:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
        L A++KP+ D+ KVF LA+ LGTKY DFR+AMLSKPPYP+Y+QFVL L+
Subjt:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
XP_022154000.1 uncharacterized protein LOC111021367 isoform X1 [Momordica charantia]8.7e-1276.09Show/hide
Query:  MKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
        MKKPLD+ TK+FHLAR LG KYKDFR+AMLS+ PYPTY+QFV +LR
Subjt:  MKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
XP_022154001.1 uncharacterized protein LOC111021367 isoform X2 [Momordica charantia]8.7e-1276.09Show/hide
Query:  MKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
        MKKPLD+ TK+FHLAR LG KYKDFR+AMLS+ PYPTY+QFV +LR
Subjt:  MKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
XP_022154021.1 uncharacterized protein LOC111021379 [Momordica charantia]6.0e-1379.59Show/hide
Query:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
        L AMKKPLDD+TKVFHLAR LG KYKDFR AMLSK PYP+Y+QFVL L+
Subjt:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
TrEMBL top hitse value%identityAlignment
A0A438HDK5 Uncharacterized protein1.0e-1067.35Show/hide
Query:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
        L A++KP+ D+ KVF LA+ LGTKY DFR+AMLSKPPYP+Y+QFVL L+
Subjt:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
A0A6J1DIE6 uncharacterized protein LOC111021367 isoform X14.2e-1276.09Show/hide
Query:  MKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
        MKKPLD+ TK+FHLAR LG KYKDFR+AMLS+ PYPTY+QFV +LR
Subjt:  MKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
A0A6J1DME2 uncharacterized protein LOC111021367 isoform X24.2e-1276.09Show/hide
Query:  MKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
        MKKPLD+ TK+FHLAR LG KYKDFR+AMLS+ PYPTY+QFV +LR
Subjt:  MKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
A0A6J1DMG5 uncharacterized protein LOC1110213792.9e-1379.59Show/hide
Query:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
        L AMKKPLDD+TKVFHLAR LG KYKDFR AMLSK PYP+Y+QFVL L+
Subjt:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
A5AU03 Reverse transcriptase Ty1/copia-type domain-containing protein1.0e-1067.35Show/hide
Query:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
        L A++KP+ D+ KVF LA+ LGTKY DFR+AMLSKPPYP+Y+QFVL L+
Subjt:  LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGTTGCAATGAAAAAGCCTCTTGATGATATTACAAAAGTCTTTCATCTAGCAAGAGCCTTAGGTACAAAATACAAGGATTTTAGGATAGCCATGTTATCCAAACCTCC
TTATCCAACTTACCATCAATTTGTTTTAACCTTAAGAACCATGAGCAGCAGCTTAGCC
mRNA sequenceShow/hide mRNA sequence
TTAGTTGCAATGAAAAAGCCTCTTGATGATATTACAAAAGTCTTTCATCTAGCAAGAGCCTTAGGTACAAAATACAAGGATTTTAGGATAGCCATGTTATCCAAACCTCC
TTATCCAACTTACCATCAATTTGTTTTAACCTTAAGAACCATGAGCAGCAGCTTAGCC
Protein sequenceShow/hide protein sequence
LVAMKKPLDDITKVFHLARALGTKYKDFRIAMLSKPPYPTYHQFVLTLRTMSSSLA