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MS004449 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004449
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpathogen-related protein-like
Genome locationscaffold804:149216..149368
RNA-Seq ExpressionMS004449
SyntenyMS004449
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577039.1 hypothetical protein SDJN03_24613, partial [Cucurbita argyrosperma subsp. sororia]2.9e-0660.78Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK
        +VDS M VEEVHVY+DP ELFG LLKGK+T  +++ +A S ASACP   L+
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK

XP_022142750.1 pathogen-related protein-like [Momordica charantia]7.7e-1582.35Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK
        +VDS M  EEVH+YYDPGELFGALLK KKTPKND  SAASDASACPFS+LK
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK

XP_022142782.1 pathogen-related protein-like [Momordica charantia]1.2e-2098.04Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK
        +VDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK

XP_023552806.1 pathogen-related protein-like isoform X1 [Cucurbita pepo subsp. pepo]2.9e-0660.78Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK
        +VDS M VEEVHVY+DP ELFG LLKGK+T  +++ +A S ASACP   L+
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK

XP_038905766.1 pathogen-related protein [Benincasa hispida]1.3e-0667.39Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACP
        +VDS M VEEVH+YYDP ELFG LLKGKK      H+ +SDASACP
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACP

TrEMBL top hitse value%identityAlignment
A0A6J1CLT6 pathogen-related protein-like3.7e-1582.35Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK
        +VDS M  EEVH+YYDPGELFGALLK KKTPKND  SAASDASACPFS+LK
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK

A0A6J1CMD2 pathogen-related protein-like5.4e-0681.25Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPK
        +VDS MG+EE H YYDPGELFGALLK KKTPK
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPK

A0A6J1CNV1 pathogen-related protein-like5.9e-2198.04Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK
        +VDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK

A0A6J1EUA5 pathogen-related protein-like3.2e-0658.82Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK
        +VDS M VEEVHVY+DP EL+G LLKGK+T  +++ +A S ASACP   L+
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK

A0A6J1JA77 pathogen-related protein-like isoform X11.9e-0658.82Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK
        +VDS M +EEVHVY+DP ELFG LLKGK+T  +++ +A S ASACP   L+
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78780.1 pathogenesis-related family protein1.1e-0643.14Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKG---KKTPKNDNHSAASDASACPFS
        +VD  +  EE+ +YYDPGELFG LLKG    +T   D+    ++  +CPF+
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKG---KKTPKNDNHSAASDASACPFS

AT1G78780.2 pathogenesis-related family protein1.1e-0643.14Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKG---KKTPKNDNHSAASDASACPFS
        +VD  +  EE+ +YYDPGELFG LLKG    +T   D+    ++  +CPF+
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKG---KKTPKNDNHSAASDASACPFS

AT1G78780.3 pathogenesis-related family protein1.1e-0643.14Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKG---KKTPKNDNHSAASDASACPFS
        +VD  +  EE+ +YYDPGELFG LLKG    +T   D+    ++  +CPF+
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKG---KKTPKNDNHSAASDASACPFS

AT1G78780.4 pathogenesis-related family protein1.1e-0643.14Show/hide
Query:  QVDSWMGVEEVHVYYDPGELFGALLKG---KKTPKNDNHSAASDASACPFS
        +VD  +  EE+ +YYDPGELFG LLKG    +T   D+    ++  +CPF+
Subjt:  QVDSWMGVEEVHVYYDPGELFGALLKG---KKTPKNDNHSAASDASACPFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGTAGATTCATGGATGGGGGTTGAAGAAGTTCATGTCTACTATGACCCAGGAGAGCTATTTGGAGCACTTTTAAAGGGCAAAAAAACCCCAAAAAATGACAATCATTC
AGCTGCTTCGGATGCCTCTGCCTGCCCATTCTCCAAGCTCAAA
mRNA sequenceShow/hide mRNA sequence
CAGGTAGATTCATGGATGGGGGTTGAAGAAGTTCATGTCTACTATGACCCAGGAGAGCTATTTGGAGCACTTTTAAAGGGCAAAAAAACCCCAAAAAATGACAATCATTC
AGCTGCTTCGGATGCCTCTGCCTGCCCATTCTCCAAGCTCAAA
Protein sequenceShow/hide protein sequence
QVDSWMGVEEVHVYYDPGELFGALLKGKKTPKNDNHSAASDASACPFSKLK