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MS004465 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004465
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein RRP5
Genome locationscaffold804:285935..287562
RNA-Seq ExpressionMS004465
SyntenyMS004465
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.8e-3484.85Show/hide
Query:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE
        MAKN+NKKKRSGA SMD+TENT  +LPQAMDVSES VHKPASG LNLKLKKGRPMKRS+NVRKT A AKAI K+EQSAEKI+KNQSKTTRI SAKTLYE
Subjt:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE

XP_008452291.1 PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo]1.1e-3384.85Show/hide
Query:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE
        MAKNRNKKKR GA SMD+TEN+V +LPQAMDVS S VHKPASG L+LKLKKGRPMKRS+NVRKTKA+AKAI KSEQS EKI+KNQSKTTRIQSAKTLYE
Subjt:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE

XP_022142748.1 uncharacterized protein LOC111012789 [Momordica charantia]1.2e-3297.56Show/hide
Query:  MDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL
        MDLTENTVVDLPQAMDVSESGVHKP SGGLNLKL+KGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL
Subjt:  MDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL

XP_022929206.1 uncharacterized protein LOC111435867 [Cucurbita moschata]3.8e-3484.85Show/hide
Query:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE
        MAKN+NKKKRSGA SMD+TENT  +LPQAMDVSES VHKPASG LNLKLKKGRPMKRS+NVRKT A AKAI K+EQSAEKI+KNQSKTTRI SAKTLYE
Subjt:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE

XP_038903593.1 uncharacterized protein LOC120090147 [Benincasa hispida]1.7e-3485.86Show/hide
Query:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE
        MAKNRNKKKRSG  SMD+TENTV +LPQAMDVSES VHKP SG LNLKLKKGRPMKRS+NVRKTKAMAKAI KSEQS EKI+KNQSKT RIQSAK LYE
Subjt:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE

TrEMBL top hitse value%identityAlignment
A0A1R3KBZ2 Uncharacterized protein2.6e-2565.66Show/hide
Query:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE
        MAKNR KKK++GATSMD++E T+ DLPQAMD SE+GV KP SG + +K+KKGRPMKRS+NVR+ K++AKAI K+EQ AEK  K++SK +R QSAK+LY+
Subjt:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE

A0A1S3BUB2 uncharacterized protein LOC1034933625.3e-3484.85Show/hide
Query:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE
        MAKNRNKKKR GA SMD+TEN+V +LPQAMDVS S VHKPASG L+LKLKKGRPMKRS+NVRKTKA+AKAI KSEQS EKI+KNQSKTTRIQSAKTLYE
Subjt:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE

A0A6J1CP23 uncharacterized protein LOC1110127895.9e-3397.56Show/hide
Query:  MDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL
        MDLTENTVVDLPQAMDVSESGVHKP SGGLNLKL+KGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL
Subjt:  MDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTL

A0A6J1EMH0 uncharacterized protein LOC1114358671.8e-3484.85Show/hide
Query:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE
        MAKN+NKKKRSGA SMD+TENT  +LPQAMDVSES VHKPASG LNLKLKKGRPMKRS+NVRKT A AKAI K+EQSAEKI+KNQSKTTRI SAKTLYE
Subjt:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE

A0A6J1J4F8 uncharacterized protein LOC1114833161.7e-3283.84Show/hide
Query:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE
        MAKN+N KKRSGA SMD+TENT  +LPQAMDVSES VHKPASG LNLKLKKGRPMKRS+NVRKT A AKAI K+EQSAEKI+KNQSKTTRI SAKTLYE
Subjt:  MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27380.1 unknown protein2.7e-0632.05Show/hide
Query:  MAKNRNKKKRSGATSMDLTENTVVD--LPQAMDVSESGVHKPASGGLNL-KLKKGRP-------------------------------------------
        M K RNKK R    SMD++E+  V    PQ MD +E+G  K AS   +L   +KG+P                                           
Subjt:  MAKNRNKKKRSGATSMDLTENTVVD--LPQAMDVSESGVHKPASGGLNL-KLKKGRP-------------------------------------------

Query:  -----------MKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE
                   MKR++N RK KA+AKAI  SE+   K  K+++KT R  SAK LYE
Subjt:  -----------MKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGAACAGGAATAAGAAGAAGCGCAGTGGCGCTACTTCAATGGACCTAACTGAAAATACCGTTGTCGATCTCCCCCAAGCGATGGATGTTTCCGAGTCTGGAGT
TCACAAACCAGCTTCTGGCGGTCTCAATCTAAAGTTGAAGAAGGGAAGACCAATGAAGCGATCACAGAATGTTAGGAAAACGAAAGCCATGGCAAAGGCCATATGTAAGA
GCGAGCAGTCAGCCGAGAAAATAATGAAAAATCAGAGCAAAACTACCAGAATACAATCTGCAAAAACGTTGTACGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGAACAGGAATAAGAAGAAGCGCAGTGGCGCTACTTCAATGGACCTAACTGAAAATACCGTTGTCGATCTCCCCCAAGCGATGGATGTTTCCGAGTCTGGAGT
TCACAAACCAGCTTCTGGCGGTCTCAATCTAAAGTTGAAGAAGGGAAGACCAATGAAGCGATCACAGAATGTTAGGAAAACGAAAGCCATGGCAAAGGCCATATGTAAGA
GCGAGCAGTCAGCCGAGAAAATAATGAAAAATCAGAGCAAAACTACCAGAATACAATCTGCAAAAACGTTGTACGAA
Protein sequenceShow/hide protein sequence
MAKNRNKKKRSGATSMDLTENTVVDLPQAMDVSESGVHKPASGGLNLKLKKGRPMKRSQNVRKTKAMAKAICKSEQSAEKIMKNQSKTTRIQSAKTLYE