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MS004469 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004469
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionWound-responsive family protein
Genome locationscaffold804:322840..323109
RNA-Seq ExpressionMS004469
SyntenyMS004469
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031383.1 hypothetical protein SDJN02_05423, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-3282.76Show/hide
Query:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF
        SAACRAW VAASIGAVEA KDQGVCRWNN IKSL  HGKTKLRSYYQAK +SASSSSAI N ++RSREE+M KVMDLSC GPST+RF
Subjt:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF

XP_022929392.1 uncharacterized protein LOC111435977 [Cucurbita moschata]3.2e-3282.76Show/hide
Query:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF
        SAACRAW VAASIGAVEA+KDQGVCRWNN IKSLH HG +KLRSYYQAK LSASSSSAIAN I +SREE+M KVMDL C GPST+RF
Subjt:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF

XP_022985278.1 uncharacterized protein LOC111483317 [Cucurbita maxima]7.2e-3281.61Show/hide
Query:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF
        SAACRAW VAASIGAVEA+KDQGVCRWNN IKSLH HG +KLRSYYQAK LSASSSSAI+N I +SREE+M KVMDL C GPST+RF
Subjt:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF

XP_022993930.1 uncharacterized protein LOC111489778 [Cucurbita maxima]5.5e-3282.76Show/hide
Query:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF
        SAACRAW VAASIGAVEALKDQGVCRWNN IKSL  HGKTKLRSYY AK +SASSSSAI N ++RSREE+M KVMDLSC GPST+RF
Subjt:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF

XP_038877273.1 uncharacterized protein LOC120069557 [Benincasa hispida]1.1e-3285.06Show/hide
Query:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF
        SAACRAW VAASIGAVEALKDQGVCRWNN IKSL  HGKTK RSYYQAK LSASSSSAIAN I +SREE+M KVMDLSC GPST+RF
Subjt:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF

TrEMBL top hitse value%identityAlignment
A0A0A0L594 Uncharacterized protein1.6e-3282.76Show/hide
Query:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF
        SA CRAW VAASIGAVEALKDQGVCRWNN IKSL  HGKTK+RSYYQAK LSASSSSAIAN I++SRE++M KVMDLSC GPST+RF
Subjt:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF

A0A6J1EMN4 uncharacterized protein LOC1114359771.6e-3282.76Show/hide
Query:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF
        SAACRAW VAASIGAVEA+KDQGVCRWNN IKSLH HG +KLRSYYQAK LSASSSSAIAN I +SREE+M KVMDL C GPST+RF
Subjt:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF

A0A6J1FVH7 uncharacterized protein LOC1114476711.0e-3181.61Show/hide
Query:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF
        SAACRAW VAASIGAVEA KDQGVCRWNN IKSL  HGKTKLRSYYQAK +SASSSSAI N ++R REE+M KVMDLSC GPST+RF
Subjt:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF

A0A6J1JD67 uncharacterized protein LOC1114833173.5e-3281.61Show/hide
Query:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF
        SAACRAW VAASIGAVEA+KDQGVCRWNN IKSLH HG +KLRSYYQAK LSASSSSAI+N I +SREE+M KVMDL C GPST+RF
Subjt:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF

A0A6J1JZW3 uncharacterized protein LOC1114897782.7e-3282.76Show/hide
Query:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF
        SAACRAW VAASIGAVEALKDQGVCRWNN IKSL  HGKTKLRSYY AK +SASSSSAI N ++RSREE+M KVMDLSC GPST+RF
Subjt:  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G14070.1 wound-responsive protein-related4.2e-0638Show/hide
Query:  MSAAC----RAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKN--LSASSSSAIA------NHIRRSREEQMGKVMDLSCFGPSTVRF
        MSAA      +W+VA +I AVE        RWN  ++  +   + +LR+         SASSSS+ +      NH     E  M +VM LSCFGP+TVRF
Subjt:  MSAAC----RAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKN--LSASSSSAIA------NHIRRSREEQMGKVMDLSCFGPSTVRF

AT4G10265.1 Wound-responsive family protein1.3e-1555.29Show/hide
Query:  MSAACRAWLVAASIGAVEALKDQ-GVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPS
        MS+A + W+VAASIGAVEALKDQ GVCRWN  I+S + + +  LRS  QAK L  SSSS    +  +  EE +  VM LSC+GPS
Subjt:  MSAACRAWLVAASIGAVEALKDQ-GVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPS

AT4G10270.1 Wound-responsive family protein4.2e-1447.78Show/hide
Query:  MSAACRAWLVAASIGAVEALKDQ-GVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSR-----EEQMGKVMDLSCFGPS
        MS+  +AW VA SIGAVEALKDQ G+CRWN  ++S++ H +  +RS  Q K  S+SS SA       S      EE +  VM LSC+GP+
Subjt:  MSAACRAWLVAASIGAVEALKDQ-GVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSR-----EEQMGKVMDLSCFGPS

AT4G33560.1 Wound-responsive family protein6.7e-1243.18Show/hide
Query:  AWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSR------EEQMGKVMDLSCFGPSTVRF
        +W VA +I AVE LKDQGV RWN   + LH     ++R+       S  +SS+ A  IR         E    K M LSCFGP+TVRF
Subjt:  AWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSR------EEQMGKVMDLSCFGPSTVRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGCAGATGAGCGCAGCGTGCAGGGCGTGGCTCGTGGCGGCGAGCATCGGCGCCGTCGAGGCGCTGAAGGATCAGGGCGTGTGCCGCTGGAACAACGCCATCAAATCCCT
TCACCACCATGGCAAGACCAAGCTCAGATCTTATTACCAGGCCAAGAACCTCTCTGCGTCCTCCTCTTCCGCCATTGCCAACCACATCAGACGATCTCGGGAGGAGCAGA
TGGGGAAAGTCATGGATTTGAGCTGCTTCGGCCCCAGCACTGTTAGATTC
mRNA sequenceShow/hide mRNA sequence
GAGCAGATGAGCGCAGCGTGCAGGGCGTGGCTCGTGGCGGCGAGCATCGGCGCCGTCGAGGCGCTGAAGGATCAGGGCGTGTGCCGCTGGAACAACGCCATCAAATCCCT
TCACCACCATGGCAAGACCAAGCTCAGATCTTATTACCAGGCCAAGAACCTCTCTGCGTCCTCCTCTTCCGCCATTGCCAACCACATCAGACGATCTCGGGAGGAGCAGA
TGGGGAAAGTCATGGATTTGAGCTGCTTCGGCCCCAGCACTGTTAGATTC
Protein sequenceShow/hide protein sequence
EQMSAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF