; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004471 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004471
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold804:346181..346531
RNA-Seq ExpressionMS004471
SyntenyMS004471
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149304.1 calcium-binding protein KRP1 [Cucumis sativus]2.4e-4885.71Show/hide
Query:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL
        +SGF DWLPTMA RLGGEGLIGELC+GF+LLM+REKGVIDFESLKRNAAALGLGDL+DEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELM+ES F L
Subjt:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL

Query:  DQALTHEFRDFC
        ++AL  EF+DFC
Subjt:  DQALTHEFRDFC

XP_008452312.1 PREDICTED: calcium-binding protein PBP1 [Cucumis melo]1.1e-4886.61Show/hide
Query:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL
        +SGF DWLPTMA RLGGEGLIGELC+GF+LLMDREKGVIDFESLKRNAAALGL DL+DEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDES F L
Subjt:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL

Query:  DQALTHEFRDFC
        ++AL  EF+DFC
Subjt:  DQALTHEFRDFC

XP_022142860.1 calcium-binding protein PBP1 [Momordica charantia]4.7e-6099.15Show/hide
Query:  ANQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDE
        ANQ PESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDE
Subjt:  ANQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDE

Query:  SLFCLDQALTHEFRDFC
        SLFCLDQALTHEFRDFC
Subjt:  SLFCLDQALTHEFRDFC

XP_022929391.1 calcium-binding protein PBP1-like [Cucurbita moschata]2.3e-4683.93Show/hide
Query:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL
        +SGF DWLP MA RLGGEGLIGELC+GF+LL DREKGVIDFESLKRNAAALGL DL+DEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDES F L
Subjt:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL

Query:  DQALTHEFRDFC
        + AL  EF+ FC
Subjt:  DQALTHEFRDFC

XP_038903612.1 calcium-binding protein KRP1-like [Benincasa hispida]1.1e-4885.71Show/hide
Query:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL
        +SGF DWLPTMA RLGGEGLIGELC+GF+LLMDREKGVIDFESLKRNAAALGL DL+DEDLR MLREGDFDGDGALNQMEFCVLMFRLSP+LMDES F L
Subjt:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL

Query:  DQALTHEFRDFC
        ++AL  EF+DFC
Subjt:  DQALTHEFRDFC

TrEMBL top hitse value%identityAlignment
A0A0A0L2H0 EF-hand domain-containing protein9.3e-4680.17Show/hide
Query:  NQGP--ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMD
        NQ P  ESGF DWLP MA  LGGEGLIGELC+GF+LLMDREKGVI+FESLKRNAAALGLGDL+D++LRGMLREGDFDGDGALNQMEFCVLMFRLSPELM+
Subjt:  NQGP--ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMD

Query:  ESLFCLDQALTHEFRD
         S +C  ++L  EFRD
Subjt:  ESLFCLDQALTHEFRD

A0A0A0L347 EF-hand domain-containing protein1.2e-4885.71Show/hide
Query:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL
        +SGF DWLPTMA RLGGEGLIGELC+GF+LLM+REKGVIDFESLKRNAAALGLGDL+DEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELM+ES F L
Subjt:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL

Query:  DQALTHEFRDFC
        ++AL  EF+DFC
Subjt:  DQALTHEFRDFC

A0A1S3BSY1 calcium-binding protein PBP15.3e-4986.61Show/hide
Query:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL
        +SGF DWLPTMA RLGGEGLIGELC+GF+LLMDREKGVIDFESLKRNAAALGL DL+DEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDES F L
Subjt:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL

Query:  DQALTHEFRDFC
        ++AL  EF+DFC
Subjt:  DQALTHEFRDFC

A0A6J1CM41 calcium-binding protein PBP12.3e-6099.15Show/hide
Query:  ANQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDE
        ANQ PESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDE
Subjt:  ANQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDE

Query:  SLFCLDQALTHEFRDFC
        SLFCLDQALTHEFRDFC
Subjt:  SLFCLDQALTHEFRDFC

A0A6J1EN05 calcium-binding protein PBP1-like1.1e-4683.93Show/hide
Query:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL
        +SGF DWLP MA RLGGEGLIGELC+GF+LL DREKGVIDFESLKRNAAALGL DL+DEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDES F L
Subjt:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL

Query:  DQALTHEFRDFC
        + AL  EF+ FC
Subjt:  DQALTHEFRDFC

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP18.7e-4173.21Show/hide
Query:  QGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAA-LGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDES
        Q P+  FHD+LPTMA  LGGEGLIGELC+GF LLMDREKGVI FESL+RNAAA LGLGDLTDED+R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ S
Subjt:  QGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAA-LGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDES

Query:  LFCLDQALTHEF
           + + +  EF
Subjt:  LFCLDQALTHEF

Q06827 Caltractin4.0e-0940.7Show/hide
Query:  FHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLS
        F ++L  M A++G      E+   F L  D E G I F++LKR A  LG  ++TDE+L+ M+ E D DGDG +N+ EF  +M + S
Subjt:  FHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLS

Q9LSQ6 Calcium-binding protein PBP16.5e-3666.37Show/hide
Query:  NQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAA-ALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDE
        NQ P+  F D+ PTMA +LGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGLGDLTD+D+R M+ EGDFD DGALNQMEFCVLMFRLSPELM+ 
Subjt:  NQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAA-ALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDE

Query:  SLFCLDQALTHEF
        S   + + +  EF
Subjt:  SLFCLDQALTHEF

Q9R1K9 Centrin-23.0e-0940.7Show/hide
Query:  FHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLS
        F D+L  M  ++  +    E+   F L  D E G I F++LKR A  LG  +LTDE+L+ M+ E D DGDG +N+ EF  +M + S
Subjt:  FHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLS

Q9ZPX9 Calcium-binding protein KIC5.5e-2754.21Show/hide
Query:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL
        E+ + D LP MA ++  E  + ELC GFSLL D E+ +I  ESL+RN+  LG+  ++ ED +GM+REGD DGDGALNQ EFCVLM RLSPE+M+++   L
Subjt:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL

Query:  DQALTHE
        ++ALT E
Subjt:  DQALTHE

Arabidopsis top hitse value%identityAlignment
AT2G46600.1 Calcium-binding EF-hand family protein3.9e-2854.21Show/hide
Query:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL
        E+ + D LP MA ++  E  + ELC GFSLL D E+ +I  ESL+RN+  LG+  ++ ED +GM+REGD DGDGALNQ EFCVLM RLSPE+M+++   L
Subjt:  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCL

Query:  DQALTHE
        ++ALT E
Subjt:  DQALTHE

AT4G27280.1 Calcium-binding EF-hand family protein6.2e-4273.21Show/hide
Query:  QGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAA-LGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDES
        Q P+  FHD+LPTMA  LGGEGLIGELC+GF LLMDREKGVI FESL+RNAAA LGLGDLTDED+R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ S
Subjt:  QGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAA-LGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDES

Query:  LFCLDQALTHEF
           + + +  EF
Subjt:  LFCLDQALTHEF

AT4G37010.1 centrin 27.2e-0632.26Show/hide
Query:  NQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLS
        NQ     F +++  M  + G    I EL   F ++     G I    +K  A  LG  + TD D+  M+ E D D DG +N  EF  +M R S
Subjt:  NQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLS

AT4G37010.2 centrin 27.2e-0632.26Show/hide
Query:  NQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLS
        NQ     F +++  M  + G    I EL   F ++     G I    +K  A  LG  + TD D+  M+ E D D DG +N  EF  +M R S
Subjt:  NQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLS

AT5G54490.1 pinoid-binding protein 14.6e-3766.37Show/hide
Query:  NQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAA-ALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDE
        NQ P+  F D+ PTMA +LGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGLGDLTD+D+R M+ EGDFD DGALNQMEFCVLMFRLSPELM+ 
Subjt:  NQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAA-ALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDE

Query:  SLFCLDQALTHEF
        S   + + +  EF
Subjt:  SLFCLDQALTHEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAAACCAAGGCCCCGAGTCCGGGTTCCACGACTGGCTGCCGACGATGGCGGCGAGGCTGGGCGGCGAGGGCTTGATCGGCGAGCTCTGCAGCGGATTCAGCCTTCTGAT
GGACAGAGAGAAGGGGGTGATCGATTTCGAGAGCCTGAAGAGGAACGCGGCGGCGCTGGGGCTGGGGGATCTGACGGACGAGGATCTCAGAGGGATGTTGAGGGAGGGGG
ATTTCGACGGCGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTTATGTTCCGATTGAGCCCCGAGTTGATGGACGAGTCACTGTTTTGCCTCGACCAGGCCCTCACC
CACGAGTTTAGGGATTTTTGT
mRNA sequenceShow/hide mRNA sequence
GCAAACCAAGGCCCCGAGTCCGGGTTCCACGACTGGCTGCCGACGATGGCGGCGAGGCTGGGCGGCGAGGGCTTGATCGGCGAGCTCTGCAGCGGATTCAGCCTTCTGAT
GGACAGAGAGAAGGGGGTGATCGATTTCGAGAGCCTGAAGAGGAACGCGGCGGCGCTGGGGCTGGGGGATCTGACGGACGAGGATCTCAGAGGGATGTTGAGGGAGGGGG
ATTTCGACGGCGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTTATGTTCCGATTGAGCCCCGAGTTGATGGACGAGTCACTGTTTTGCCTCGACCAGGCCCTCACC
CACGAGTTTAGGGATTTTTGT
Protein sequenceShow/hide protein sequence
ANQGPESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDEDLRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCLDQALT
HEFRDFC