CuGenDBv2

Gene ID	MS004493
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	scaffold1189:9986..10260
RNA-Seq Expression	MS004493
Synteny	MS004493
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0034357 - photosynthetic membrane (cellular component) GO:0016491 - oxidoreductase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AVM84333.1 photosystem I P700 apoprotein A1 [Adenocalymma subincanum]

7.8e-23

69.57

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        GDLVGVGGKV LLPIPLG  +FLV++IH F I+VT+LILLK VLF+RSS LI  K NLGF F CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

GFP91751.1 photosystem i p700 chlorophyll a apoprotein a1 [Phtheirospermum japonicum]

3.2e-24

70.65

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        G LV VGGKV LLPIPLG  +FLV++IH F I+VT+LILLK VLF+RSS LIL KENLGFCF CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

KJB46466.1 hypothetical protein B456_007G370800, partial [Gossypium raimondii]

3.5e-23

69.23

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Query:  DLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        DLV VGGKV LLPIPLG  NFLV++IH F I+VT+LILLK VLF+RSS L+  K NLGFCF CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  DLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

PHT54978.1 Photosystem I chlorophyll a apoprotein A1 [Capsicum baccatum]

7.1e-24

70.65

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CDE-ARRGTCQVFVWDNVFLGLFWRYDLI
        GDLV VGGKV LLPIPLG  +FLVY+IH F I+VT+LILLK VLFSRSSHLIL K N+GF F CD   R GTCQV  WD+ FLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CDE-ARRGTCQVFVWDNVFLGLFWRYDLI

PHU30256.1 Photosystem I chlorophyll a apoprotein A1 [Capsicum chinense]

7.8e-23

68.48

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        GDLV VGGKV LLPIPLG  + LV++IH F I+VT+LILLK VLF+ SSHLI  K NLGFCF CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

TrEMBL top hits

e value

%identity

Alignment

A0A077RRD5 Photosystem I P700 chlorophyll a apoprotein A1

5.0e-23

68.48

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        G+LV VGGKV LLPIPLG  +FLV++IH F I+VT+LILLK VLF+RSS LI  K NLGF F CD   R GTCQVF WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

A0A0D2SWN6 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)

1.7e-23

69.23

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Query:  DLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        DLV VGGKV LLPIPLG  NFLV++IH F I+VT+LILLK VLF+RSS L+  K NLGFCF CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  DLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

A0A2G2XBW3 Photosystem I chlorophyll a apoprotein A1

3.4e-24

70.65

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CDE-ARRGTCQVFVWDNVFLGLFWRYDLI
        GDLV VGGKV LLPIPLG  +FLVY+IH F I+VT+LILLK VLFSRSSHLIL K N+GF F CD   R GTCQV  WD+ FLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CDE-ARRGTCQVFVWDNVFLGLFWRYDLI

A0A2G3DGY8 Photosystem I chlorophyll a apoprotein A1

3.8e-23

68.48

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        GDLV VGGKV LLPIPLG  + LV++IH F I+VT+LILLK VLF+ SSHLI  K NLGFCF CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

A0A2P1GHA7 Photosystem I P700 chlorophyll a apoprotein A1

3.8e-23

69.57

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        GDLVGVGGKV LLPIPLG  +FLV++IH F I+VT+LILLK VLF+RSS LI  K NLGF F CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

SwissProt top hits

e value

%identity

Alignment

A0A335 Photosystem I P700 chlorophyll a apoprotein A1

3.9e-25

68.48

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        GDLV VGGKV LLPIPLG  +FLV++IH F I+VT+LILLK VLF+RSS LI  K NLGF F CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

Q2QD89 Photosystem I P700 chlorophyll a apoprotein A1

2.3e-25

69.57

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        GDLV VGGKV LLPIPLG  +FLV++IH F I+VT+LILLK VLFSRSS LI  K NLGF F CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

Q70Y03 Photosystem I P700 chlorophyll a apoprotein A1

3.9e-25

68.48

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        GDLV VGGKV LLPIPLG  +FLV++IH F I+VT+LILLK VLF+RSS LI  K NLGF F CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

Q7YJX2 Photosystem I P700 chlorophyll a apoprotein A1

3.9e-25

68.48

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        GDLV VGGKV LLPIPLG  +FLV++IH F I+VT+LILLK VLF+RSS LI  K NLGF F CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

Q8S8X4 Photosystem I P700 chlorophyll a apoprotein A1

3.9e-25

68.48

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CDEARR-GTCQVFVWDNVFLGLFWRYDLI
        GDLV VGGKV LLPIPLG  +FLV++IH F I+VT+LILLK VLF+RSS LI  K NLGF F CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CDEARR-GTCQVFVWDNVFLGLFWRYDLI

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

3.8e-07

37.5

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Query:  NFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        +FLV++     ++ T LIL+K  L +R S L+  K++ G+ F CD   R GTC +  WD  +L +FW  + I
Subjt:  NFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

ATCG00350.1 Photosystem I, PsaA/PsaB protein

8.1e-26

67.39

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Query:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI
        G+LV VGGKV LLPIPLG  +FLV++IH F I+VT+LILLK VLF+RSS LI  K NLGF F CD   R GTCQV  WD+VFLGLFW Y+ I
Subjt:  GDLVGVGGKVDLLPIPLG-ENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCF-CD-EARRGTCQVFVWDNVFLGLFWRYDLI

Sequences

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CDS sequence

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GGTGATTTAGTCGGGGTGGGTGGCAAAGTTGATTTGTTACCTATTCCATTAGGAGAAAACTTTTTAGTGTATTATATTCATGTATTTGCGATTTATGTGACAATATTGAT
ACTTTTGAAAGATGTTCTATTTTCTCGTAGCTCGCATTTGATACTGGGTAAAGAAAATCTTGGTTTTTGTTTTTGTGATGAAGCTAGAAGAGGGACATGTCAAGTATTCG
TTTGGGATAATGTCTTCTTAGGATTATTTTGGAGGTATGATTTAATT

mRNA sequence

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Protein sequence

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GDLVGVGGKVDLLPIPLGENFLVYYIHVFAIYVTILILLKDVLFSRSSHLILGKENLGFCFCDEARRGTCQVFVWDNVFLGLFWRYDLI

MS004493 (gene) of Bitter gourd (TR) v1 genome