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MS004495 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004495
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1189:11107..11445
RNA-Seq ExpressionMS004495
SyntenyMS004495
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8118398.1 hypothetical protein EE612_061187 [Oryza sativa]2.0e-0439.8Show/hide
Query:  AYAKASLSSCPP-KNNLALFDA---VRVEPFRPRSTRIPTEQGALDNTFWFTNL----NAGFVASIPPSTV--CCLWNGMIMKATRLSSAKLQMSSCI
        A   AS SS PP K      D         +R RSTR+PTE GA  +TFW T        G ++  PPS+   C LW G    A   SSA++QMS C+
Subjt:  AYAKASLSSCPP-KNNLALFDA---VRVEPFRPRSTRIPTEQGALDNTFWFTNL----NAGFVASIPPSTV--CCLWNGMIMKATRLSSAKLQMSSCI
KAF3498260.1 hypothetical protein DY000_02058125 [Brassica cretica]3.6e-0657.89Show/hide
Query:  IPTEQGALDNTFWFTNLNAGFVASIPPSTVCCLWNGMIMKATRLSSAKLQMSSCIVE
        IPTEQGAL NT  F    A F  S  PS   CLWNGM M+A  LSSA++QMSS ++E
Subjt:  IPTEQGALDNTFWFTNLNAGFVASIPPSTVCCLWNGMIMKATRLSSAKLQMSSCIVE
TrEMBL top hitse value%identityAlignment
A0A0A8YLN3 Uncharacterized protein1.6e-0741.67Show/hide
Query:  PGCSEILHAYAKASLSSCPPKNNLALFDAVRVEPFRPRSTRIPTEQGALDNTFWFTNLNAGFVASIPPSTVCCLWNGMIMKATRLSSAKLQMSSCI
        PG   +  A    S SS PPK + A        P  PRSTR+PT  G    T  F++  AG   S+PPS   CLWNG ++ A   SSA   MSSC+
Subjt:  PGCSEILHAYAKASLSSCPPKNNLALFDAVRVEPFRPRSTRIPTEQGALDNTFWFTNLNAGFVASIPPSTVCCLWNGMIMKATRLSSAKLQMSSCI
A0A0P0YCS8 Os12g0640550 protein9.6e-0539.8Show/hide
Query:  AYAKASLSSCPP-KNNLALFDA---VRVEPFRPRSTRIPTEQGALDNTFWFTNL----NAGFVASIPPSTV--CCLWNGMIMKATRLSSAKLQMSSCI
        A   AS SS PP K      D         +R RSTR+PTE GA  +TFW T        G ++  PPS+   C LW G    A   SSA++QMS C+
Subjt:  AYAKASLSSCPP-KNNLALFDA---VRVEPFRPRSTRIPTEQGALDNTFWFTNL----NAGFVASIPPSTV--CCLWNGMIMKATRLSSAKLQMSSCI
C7J9I6 Os12g0640550 protein9.6e-0539.8Show/hide
Query:  AYAKASLSSCPP-KNNLALFDA---VRVEPFRPRSTRIPTEQGALDNTFWFTNL----NAGFVASIPPSTV--CCLWNGMIMKATRLSSAKLQMSSCI
        A   AS SS PP K      D         +R RSTR+PTE GA  +TFW T        G ++  PPS+   C LW G    A   SSA++QMS C+
Subjt:  AYAKASLSSCPP-KNNLALFDA---VRVEPFRPRSTRIPTEQGALDNTFWFTNL----NAGFVASIPPSTV--CCLWNGMIMKATRLSSAKLQMSSCI
J3NFD9 Uncharacterized protein3.4e-1047.78Show/hide
Query:  AYAKASLSSCPPKNNLAL-FDAVRVEPF-RPRSTRIPTEQGALDNTFWFTNLNAGFVASIPPSTVCCLWNGMIMKATRLSSAKLQMSSCI
        A   AS SS PP N       A     F RPRSTR+PTE GA  +TFWFT+ +  + AS+ PS +C LWNG    A   SSA++QMS C+
Subjt:  AYAKASLSSCPPKNNLAL-FDAVRVEPF-RPRSTRIPTEQGALDNTFWFTNLNAGFVASIPPSTVCCLWNGMIMKATRLSSAKLQMSSCI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTCATTACGGTTAAGCTCACTCCTGGATGCTCTGAAATTCTCCACGCGTATGCTAAAGCTTCTCTGTCGTCTTGTCCGCCGAAGAACAACTTAGCCTTGTTCGA
TGCGGTTCGAGTGGAGCCATTTAGGCCCCGATCCACTAGGATTCCGACGGAGCAAGGTGCGTTGGATAACACATTTTGGTTTACCAATCTGAATGCTGGATTTGTAGCTT
CCATTCCTCCATCGACGGTTTGTTGCTTGTGGAATGGGATGATTATGAAGGCAACGCGTTTGTCCTCGGCTAAATTGCAGATGTCTTCGTGCATTGTGGAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCTCATTACGGTTAAGCTCACTCCTGGATGCTCTGAAATTCTCCACGCGTATGCTAAAGCTTCTCTGTCGTCTTGTCCGCCGAAGAACAACTTAGCCTTGTTCGA
TGCGGTTCGAGTGGAGCCATTTAGGCCCCGATCCACTAGGATTCCGACGGAGCAAGGTGCGTTGGATAACACATTTTGGTTTACCAATCTGAATGCTGGATTTGTAGCTT
CCATTCCTCCATCGACGGTTTGTTGCTTGTGGAATGGGATGATTATGAAGGCAACGCGTTTGTCCTCGGCTAAATTGCAGATGTCTTCGTGCATTGTGGAG
Protein sequenceShow/hide protein sequence
MNLITVKLTPGCSEILHAYAKASLSSCPPKNNLALFDAVRVEPFRPRSTRIPTEQGALDNTFWFTNLNAGFVASIPPSTVCCLWNGMIMKATRLSSAKLQMSSCIVE