; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004511 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004511
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRas-related protein Rab-18
Genome locationscaffold1189:236144..240714
RNA-Seq ExpressionMS004511
SyntenyMS004511
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147350.1 ras-related protein RABC1 [Cucumis sativus]8.1e-11197.13Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
         DASTSSCC
Subjt:  PDASTSSCC

XP_008460888.1 PREDICTED: ras-related protein RABC1-like [Cucumis melo]4.0e-11096.65Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLSEVWAKEIDLYSTN DCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
         DAS SSCC
Subjt:  PDASTSSCC

XP_022156664.1 ras-related protein RABC1-like [Momordica charantia]1.0e-113100Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
        PDASTSSCC
Subjt:  PDASTSSCC

XP_022971628.1 ras-related protein RABC1-like [Cucurbita maxima]3.4e-10995.69Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGK+LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKES+RTVTKKEGIDMARE GCLF ECSAKTRVNVQQCFEELVLKIL+TPSLLSEGSKGVR+NIFKEKPPQ
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
        PDAS SSCC
Subjt:  PDASTSSCC

XP_038901438.1 ras-related protein RABC1-like [Benincasa hispida]7.3e-11297.61Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFT+DSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLSEVWA+EIDLYSTNQDCIKMLVGNKVDKES+RTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
        PDASTSSCC
Subjt:  PDASTSSCC

TrEMBL top hitse value%identityAlignment
A0A0A0LQC6 Uncharacterized protein3.9e-11197.13Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
         DASTSSCC
Subjt:  PDASTSSCC

A0A1S3CDH6 ras-related protein RABC1-like1.9e-11096.65Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLSEVWAKEIDLYSTN DCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
         DAS SSCC
Subjt:  PDASTSSCC

A0A5D3BQN6 Ras-related protein RABC1-like1.9e-11096.65Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLSEVWAKEIDLYSTN DCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
         DAS SSCC
Subjt:  PDASTSSCC

A0A6J1DU73 ras-related protein RABC1-like4.9e-114100Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
        PDASTSSCC
Subjt:  PDASTSSCC

A0A6J1I7F2 ras-related protein RABC1-like1.6e-10995.69Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGK+LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKES+RTVTKKEGIDMARE GCLF ECSAKTRVNVQQCFEELVLKIL+TPSLLSEGSKGVR+NIFKEKPPQ
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
        PDAS SSCC
Subjt:  PDASTSSCC

SwissProt top hitse value%identityAlignment
O23657 Ras-related protein RABC14.0e-9782.78Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M SSS Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLS++WAKEIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPSL +EGS G ++NIFK+ P Q
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
          +++SS C
Subjt:  PDASTSSCC

O49841 Ras-related protein RABC2a5.1e-8470.81Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M SSS QS +D  FK+L+IGDSGVGKSSLL+SF S S EDL+PTIGVDFK+K +T GGK+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNL +VW KEI+LYSTNQ+C++MLVGNKVD+ES R V+++EGI +A+E  C+F+ECSA+TR NV+QCFEEL LKI++ PSLL EGS  V+RNI K+KP  
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
           + S CC
Subjt:  PDASTSSCC

P36862 GTP-binding protein yptV34.4e-5963.69Show/hide
Query:  DYLFKLLMIGDSGVGKSSLLLSFTSDSFED-LSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAK
        DY FK+L++GDSGVGKS +L  FTS  FE+  + TIGVDFKVKY+TA GK+ KL IWDTAGQERFRTLTSSYYRGAQGII VYDVTRR+TF +L   W +
Subjt:  DYLFKLLMIGDSGVGKSSLLLSFTSDSFED-LSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAK

Query:  EIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKG
        E D+YST +  IKM+V NKVD  + R V+ +EG D AR +GCLF+E SA+  + V Q FEEL+LKILDTP LL   + G
Subjt:  EIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKG

Q6DHC1 Ras-related protein Rab-18-B1.2e-5356.92Show/hide
Query:  KLLMIGDSGVGKSSLLLSFTSDSFE-DLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDL
        K+L+IG+SGVGKSSLLL FT D+F+ +L+ TIGVDFKVK +   G + KLAIWDTAGQERFRTLT SYYRGAQG+I+VYDVT+R+TFT L E W  E++ 
Subjt:  KLLMIGDSGVGKSSLLLSFTSDSFE-DLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDL

Query:  YSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSC
        Y T  D +KMLVGNK+DK++ R V + EG+  AR++  LFIE SAKTR  VQ  FEELV KIL TP L     +     +   +P +  A    C
Subjt:  YSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSC

Q9SF92 Ras-related protein RABC2b9.7e-7566.03Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M SSS QS +D  FK+L+IGDSGVGKSSLLLSF S S EDL+PTIGVDFK+K +   GK+LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+RETF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
         NL+++WAKEI+LYSTN DCIKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR NV  CFEEL LKI++ PSLL EGS  V+R       P 
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
          A    CC
Subjt:  PDASTSSCC

Arabidopsis top hitse value%identityAlignment
AT1G43890.1 RAB GTPASE HOMOLOG B182.9e-9882.78Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M SSS Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLS++WAKEIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPSL +EGS G ++NIFK+ P Q
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
          +++SS C
Subjt:  PDASTSSCC

AT1G43890.2 RAB GTPASE HOMOLOG B182.9e-9882.78Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M SSS Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLS++WAKEIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPSL +EGS G ++NIFK+ P Q
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
          +++SS C
Subjt:  PDASTSSCC

AT1G43890.3 RAB GTPASE HOMOLOG B182.9e-9882.78Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M SSS Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNLS++WAKEIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPSL +EGS G ++NIFK+ P Q
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
          +++SS C
Subjt:  PDASTSSCC

AT3G09910.1 RAB GTPase homolog C2B6.9e-7666.03Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M SSS QS +D  FK+L+IGDSGVGKSSLLLSF S S EDL+PTIGVDFK+K +   GK+LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+RETF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
         NL+++WAKEI+LYSTN DCIKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR NV  CFEEL LKI++ PSLL EGS  V+R       P 
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
          A    CC
Subjt:  PDASTSSCC

AT5G03530.1 RAB GTPase homolog C2A3.6e-8570.81Show/hide
Query:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF
        M SSS QS +D  FK+L+IGDSGVGKSSLL+SF S S EDL+PTIGVDFK+K +T GGK+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETF
Subjt:  MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETF

Query:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ
        TNL +VW KEI+LYSTNQ+C++MLVGNKVD+ES R V+++EGI +A+E  C+F+ECSA+TR NV+QCFEEL LKI++ PSLL EGS  V+RNI K+KP  
Subjt:  TNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ

Query:  PDASTSSCC
           + S CC
Subjt:  PDASTSSCC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCGTCGTCGAATCAATCTGAGTTTGATTACTTGTTCAAGTTGTTGATGATTGGGGACTCGGGGGTTGGTAAAAGTAGTCTGCTATTGAGTTTCACTTCTGATAG
CTTCGAGGATCTCTCACCAACAATCGGTGTGGATTTTAAGGTAAAGTATGTTACTGCTGGGGGTAAGAAGCTAAAGCTTGCAATTTGGGATACAGCTGGGCAGGAGAGAT
TCAGAACATTGACGAGTTCGTACTACAGAGGTGCTCAAGGGATCATTATGGTTTATGATGTTACACGGAGAGAGACATTCACAAATCTGTCTGAGGTATGGGCGAAGGAA
ATAGACCTATATTCAACAAATCAAGACTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACGGTAACAAAGAAGGAGGGAATTGACATGGCCAG
GGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAATGTACAACAATGCTTTGAAGAACTTGTTCTAAAGATTCTCGATACGCCCAGCCTTTTATCTG
AAGGCTCTAAAGGAGTGAGAAGGAACATTTTCAAGGAAAAGCCTCCACAGCCCGACGCATCCACAAGCAGTTGTTGC
mRNA sequenceShow/hide mRNA sequence
ATGGATTCGTCGTCGAATCAATCTGAGTTTGATTACTTGTTCAAGTTGTTGATGATTGGGGACTCGGGGGTTGGTAAAAGTAGTCTGCTATTGAGTTTCACTTCTGATAG
CTTCGAGGATCTCTCACCAACAATCGGTGTGGATTTTAAGGTAAAGTATGTTACTGCTGGGGGTAAGAAGCTAAAGCTTGCAATTTGGGATACAGCTGGGCAGGAGAGAT
TCAGAACATTGACGAGTTCGTACTACAGAGGTGCTCAAGGGATCATTATGGTTTATGATGTTACACGGAGAGAGACATTCACAAATCTGTCTGAGGTATGGGCGAAGGAA
ATAGACCTATATTCAACAAATCAAGACTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACGGTAACAAAGAAGGAGGGAATTGACATGGCCAG
GGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAATGTACAACAATGCTTTGAAGAACTTGTTCTAAAGATTCTCGATACGCCCAGCCTTTTATCTG
AAGGCTCTAAAGGAGTGAGAAGGAACATTTTCAAGGAAAAGCCTCCACAGCCCGACGCATCCACAAGCAGTTGTTGC
Protein sequenceShow/hide protein sequence
MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKE
IDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC