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MS004560 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004560
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold995:259034..259273
RNA-Seq ExpressionMS004560
SyntenyMS004560
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591905.1 hypothetical protein SDJN03_14251, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2991.25Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
        + +ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAA+ASV +SES S
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
XP_022138625.1 uncharacterized protein LOC111009737 [Momordica charantia]5.4e-3193.75Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
        + +ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASV +SESHS
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
XP_022937150.1 uncharacterized protein LOC111443534 [Cucurbita moschata]1.3e-2992.5Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
        + +ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAA+ASV ESES S
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
XP_022976612.1 uncharacterized protein LOC111476955 [Cucurbita maxima]1.7e-2991.25Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
        + +ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG+SACEREHAERQMKLLEAQNSAA+ASV ESES S
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
XP_042968398.1 uncharacterized protein LOC122301251 [Carya illinoinensis]1.7e-2991.25Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
        + +ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADAS+TE+ S S
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
TrEMBL top hitse value%identityAlignment
A0A067GM95 Uncharacterized protein (Fragment)5.4e-2990.79Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTES
        + +ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG+SACEREHAERQMKLLEAQN+AADAS+TE+
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTES
A0A6J1C9Z5 uncharacterized protein LOC1110097372.6e-3193.75Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
        + +ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASV +SESHS
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
A0A6J1FFR1 uncharacterized protein LOC1114435346.4e-3092.5Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
        + +ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAA+ASV ESES S
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
A0A6J1IG79 uncharacterized protein LOC1114769558.4e-3091.25Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
        + +ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG+SACEREHAERQMKLLEAQNSAA+ASV ESES S
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS
V4TCL4 Uncharacterized protein5.4e-2990.79Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTES
        + +ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG+SACEREHAERQMKLLEAQN+AADAS+TE+
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21930.1 unknown protein3.6e-2571.6Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAADASVTESESHS
        + +ALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE QMKLL ++QN+    + TE+E  S
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAADASVTESESHS
AT3G42150.1 unknown protein4.0e-2469.62Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAADASVTESES
        + +ALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL ++QN+    + T +E+
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAADASVTESES
AT3G42150.2 unknown protein4.0e-2469.62Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAADASVTESES
        + +ALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL ++QN+    + T +E+
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAADASVTESES
AT3G42150.3 unknown protein4.0e-2469.62Show/hide
Query:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAADASVTESES
        + +ALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL ++QN+    + T +E+
Subjt:  IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAADASVTESES

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTACAGTGCGTTGGGCACCTGGGTATTCTCAGTAGCAGGGGCGTTGCTAGCAATTCCAGTGGGAATAAAGAGAAAGTCTCTGGCACCCCTTGTGTTTTTTGGCACAAC
TGGTACAATGCTTGATATTATAATGGGAATTAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGAAGCTGTTAGAAGCTCAAAACTCTGCAGCCGATGCTTCTGTTA
CCGAATCCGAATCCCATTCT
mRNA sequenceShow/hide mRNA sequence
ATTTACAGTGCGTTGGGCACCTGGGTATTCTCAGTAGCAGGGGCGTTGCTAGCAATTCCAGTGGGAATAAAGAGAAAGTCTCTGGCACCCCTTGTGTTTTTTGGCACAAC
TGGTACAATGCTTGATATTATAATGGGAATTAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGAAGCTGTTAGAAGCTCAAAACTCTGCAGCCGATGCTTCTGTTA
CCGAATCCGAATCCCATTCT
Protein sequenceShow/hide protein sequence
IYSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAADASVTESESHS