; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004567 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004567
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEF hand calcium-binding family protein
Genome locationscaffold995:309265..309660
RNA-Seq ExpressionMS004567
SyntenyMS004567
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608067.1 putative calcium-binding protein CML29, partial [Cucurbita argyrosperma subsp. sororia]3.4e-5484.85Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        FRAFDADNDGLI+A EVGGIMGSLGYNLSE+DVN+MMEEGDVD+DGLLSMGEFLEM+ RSVEVGEV G YLK+A+EAL ADGDDLVSGEELY+VF+N+GL
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
        +VS+EDC AIVASMDGD DGAVFLEDLKLIV+
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD

XP_022142920.1 probable calcium-binding protein CML29 [Momordica charantia]1.5e-65100Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
        EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD

XP_022941005.1 probable calcium-binding protein CML29 [Cucurbita moschata]1.2e-5485.61Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        FRAFDADNDGLI+A EVGGIMGSLGYNLSE+DVN+MMEEGDVD+DGLLSMGEFLEM+ARSVEVGEV G YLK+A+EAL ADGDDLVSGEELY+VF+N+GL
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
        +VS+EDC AIVASMDGD DGAVFLEDLKLIV+
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD

XP_022981068.1 probable calcium-binding protein CML29 [Cucurbita maxima]1.2e-5485.61Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        FRAFDADNDGLI+A EVGGIMGSLGYNLSE+DVN+MMEEGDVD+DGLLSMGEFLEM+ARSVEVGEV G YLK+A+EAL ADGDDLVSGEELY+VF+N+GL
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
        +VS+EDC AIVASMDGD DGAVFLEDLKLIV+
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD

XP_023525266.1 probable calcium-binding protein CML29 [Cucurbita pepo subsp. pepo]1.3e-5384.09Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        FRAFD DND LI+A EVGGIMGSLGYNLSE+DVN+MMEEGDVD+DGLLSMGEFLEM+ARSVEVGEV G YLK+A+EAL ADGDDLVSGEELY+VF+N+GL
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
        +VS+EDC AIVASMDGD DGAVFLEDLKLIV+
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD

TrEMBL top hitse value%identityAlignment
A0A1S3B9P7 probable calcium-binding protein CML291.7e-5181.06Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        FRAFDADNDGLI++ EVGGI+GSLGYNLSEEDV +MMEEGD DKDGLLSMGEFLEMNA+++EVGE +GSYLKIA EALKADGDDLVSGEELYDVF+N+GL
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
        +VS+ED  AIVAS+DGD DGA+FL D KLIV+
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD

A0A5D3D6S0 Putative calcium-binding protein CML291.7e-5181.06Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        FRAFDADNDGLI++ EVGGI+GSLGYNLSEEDV +MMEEGD DKDGLLSMGEFLEMNA+++EVGE +GSYLKIA EALKADGDDLVSGEELYDVF+N+GL
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
        +VS+ED  AIVAS+DGD DGA+FL D KLIV+
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD

A0A6J1CMA3 probable calcium-binding protein CML297.0e-66100Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
        EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD

A0A6J1FSB7 probable calcium-binding protein CML295.6e-5585.61Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        FRAFDADNDGLI+A EVGGIMGSLGYNLSE+DVN+MMEEGDVD+DGLLSMGEFLEM+ARSVEVGEV G YLK+A+EAL ADGDDLVSGEELY+VF+N+GL
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
        +VS+EDC AIVASMDGD DGAVFLEDLKLIV+
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD

A0A6J1J135 probable calcium-binding protein CML295.6e-5585.61Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        FRAFDADNDGLI+A EVGGIMGSLGYNLSE+DVN+MMEEGDVD+DGLLSMGEFLEM+ARSVEVGEV G YLK+A+EAL ADGDDLVSGEELY+VF+N+GL
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD
        +VS+EDC AIVASMDGD DGAVFLEDLKLIV+
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIVD

SwissProt top hitse value%identityAlignment
Q5Z676 Probable calcium-binding protein CML295.1e-2145.45Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLE-MNARSVEVGEVMGSYLKIAYEALK-ADGDDLVSGEELYDVFLNV
        F+AFD+DNDGL+TAPE+ G++ SLG +  E +V  M+   D D+DG LS+ E L+ MNA  + +G  +G+ L+ A  AL+ A G D V G +     L+V
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLE-MNARSVEVGEVMGSYLKIAYEALK-ADGDDLVSGEELYDVFLNV

Query:  GLEVSVEDCNAIVASMDGDEDGAVFLEDLKLI
            SVEDC  I+A MDGD DGA+ +E+ +L+
Subjt:  GLEVSVEDCNAIVASMDGDEDGAVFLEDLKLI

Q8RZB5 Probable calcium-binding protein CML106.4e-1632.06Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        FR FDA+ DG I+  E+G +  SLG+  +++++  MM E D D DG +S+ EF  +NA +      +   L+ A+    ADG+  +S  EL  V   +G 
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIV
        + +V+ C  ++  +D + DG +  E+ K+++
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIV

Q9FYK2 Probable calcium-binding protein CML256.9e-1833.59Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        F+ FD + DG I++ E+G IM SLG+ + EE++   + E D   DG ++  EF+E+N + ++  +V+ + LK A+     DG+  +S EEL++V  ++G 
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIV
        E S+ +C  ++  +D D DG +  E+ K+++
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIV

Q9LE22 Probable calcium-binding protein CML273.2e-1532.03Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        F  FD++ DG I+  E+GG+  ++G + +E ++N ++EE D D+DG +++ EF  +   S    E+     + A++    D + L+S  EL+ V   +G+
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLK
          SVEDC  ++  +D D DG V  E+ +
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLK

Q9M7R0 Calcium-binding allergen Ole e 83.2e-1534.62Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMG--SYLKIAYEALKADGDDLVSGEELYDVFLNV
        F  FDA+ DG I+  E+ G++ +LG N S+E++  +MEE D DKDG +++ EF        +     G  + LK A+E    D + L+S  EL+ +   +
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMG--SYLKIAYEALKADGDDLVSGEELYDVFLNV

Query:  GLEVSVEDCNAIVASMDGDEDGAVFLEDLK
        G   +  DC  ++ S+D D DG V  E+ K
Subjt:  GLEVSVEDCNAIVASMDGDEDGAVFLEDLK

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein2.3e-1632.03Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        F  FD++ DG I+  E+GG+  ++G + +E ++N ++EE D D+DG +++ EF  +   S    E+     + A++    D + L+S  EL+ V   +G+
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLK
          SVEDC  ++  +D D DG V  E+ +
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLK

AT1G18210.2 Calcium-binding EF-hand family protein2.3e-1632.03Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        F  FD++ DG I+  E+GG+  ++G + +E ++N ++EE D D+DG +++ EF  +   S    E+     + A++    D + L+S  EL+ V   +G+
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLK
          SVEDC  ++  +D D DG V  E+ +
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLK

AT1G24620.1 EF hand calcium-binding protein family4.9e-1933.59Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        F+ FD + DG I++ E+G IM SLG+ + EE++   + E D   DG ++  EF+E+N + ++  +V+ + LK A+     DG+  +S EEL++V  ++G 
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIV
        E S+ +C  ++  +D D DG +  E+ K+++
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLKLIV

AT1G73630.1 EF hand calcium-binding protein family2.1e-1431.25Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        F  FDA+ DG I+  E+G +  S+G + +EE++N +++E D+D DG ++  EF  +   S    E+     + A++    + + L+S  E++ V   +G+
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLEDLK
          SVEDC  ++  +D D DG V  E+ +
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLEDLK

AT2G15680.1 Calcium-binding EF-hand family protein3.6e-1433.33Show/hide
Query:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL
        F  FD D DG I+  E   ++ +LG   + EDV  + +  D+D DG +   EF++   RS   G +  S ++ ++     +GD  +S EE+  V   +G 
Subjt:  FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGL

Query:  EVSVEDCNAIVASMDGDEDGAVFLED
          S+EDCN +V ++D D DG V +E+
Subjt:  EVSVEDCNAIVASMDGDEDGAVFLED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCCGAGCATTCGACGCAGACAACGATGGGCTGATCACGGCACCGGAGGTCGGGGGGATCATGGGTTCGCTCGGGTACAACCTGAGCGAGGAAGACGTGAATTTGATGAT
GGAGGAAGGAGACGTGGACAAAGACGGGCTGCTGAGCATGGGGGAGTTTCTGGAGATGAATGCAAGGAGTGTGGAGGTGGGGGAGGTGATGGGGAGCTATCTGAAGATTG
CTTATGAGGCTCTGAAGGCAGATGGGGATGATCTGGTGAGCGGGGAAGAGCTTTATGATGTGTTTTTGAATGTGGGATTGGAGGTTTCTGTTGAGGATTGTAATGCTATA
GTGGCTTCCATGGATGGGGATGAAGATGGAGCTGTGTTTCTTGAGGATTTGAAACTTATTGTTGAT
mRNA sequenceShow/hide mRNA sequence
TTCCGAGCATTCGACGCAGACAACGATGGGCTGATCACGGCACCGGAGGTCGGGGGGATCATGGGTTCGCTCGGGTACAACCTGAGCGAGGAAGACGTGAATTTGATGAT
GGAGGAAGGAGACGTGGACAAAGACGGGCTGCTGAGCATGGGGGAGTTTCTGGAGATGAATGCAAGGAGTGTGGAGGTGGGGGAGGTGATGGGGAGCTATCTGAAGATTG
CTTATGAGGCTCTGAAGGCAGATGGGGATGATCTGGTGAGCGGGGAAGAGCTTTATGATGTGTTTTTGAATGTGGGATTGGAGGTTTCTGTTGAGGATTGTAATGCTATA
GTGGCTTCCATGGATGGGGATGAAGATGGAGCTGTGTTTCTTGAGGATTTGAAACTTATTGTTGAT
Protein sequenceShow/hide protein sequence
FRAFDADNDGLITAPEVGGIMGSLGYNLSEEDVNLMMEEGDVDKDGLLSMGEFLEMNARSVEVGEVMGSYLKIAYEALKADGDDLVSGEELYDVFLNVGLEVSVEDCNAI
VASMDGDEDGAVFLEDLKLIVD