CuGenDBv2

Gene ID	MS004569
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Hydroxyproline-rich glycoprotein family protein
Genome location	scaffold995:375723..376220
RNA-Seq Expression	MS004569
Synteny	MS004569
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8649619.1 hypothetical protein Csa_012837 [Cucumis sativus]

3.7e-50

73.05

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSP--SPPP---QKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSP
        MD DEFYR+PAAVPFKWEIKPGVPR HHRL  SP  SPP    QKLKPPP VSH   P      SLHSS RT+S+RWRF RS      QVS ++GCFPSP
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSP--SPPP---QKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSP

Query:  SPNRKSGKSMNRK-PEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWA
         PNRKS KS++RK PEP+Y+++L+TLSRWSVSSRKSISPFR SVSSSPSSFSSYQSSPRPTSDTEWA
Subjt:  SPNRKSGKSMNRK-PEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWA

XP_004142634.1 uncharacterized protein LOC101220757 [Cucumis sativus]

2.1e-53

73.84

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSP--SPPP---QKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSP
        MD DEFYR+PAAVPFKWEIKPGVPR HHRL  SP  SPP    QKLKPPP VSH   P      SLHSS RT+S+RWRF RS      QVS ++GCFPSP
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSP--SPPP---QKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSP

Query:  SPNRKSGKSMNRK-PEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
         PNRKS KS++RK PEP+Y+++L+TLSRWSVSSRKSISPFR SVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  SPNRKSGKSMNRK-PEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

XP_008444194.1 PREDICTED: uncharacterized protein LOC103487607 [Cucumis melo]

1.0e-52

73.99

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSP--SPPP---QKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSP
        MD DEFYR+PAAVPFKWEIKPGVPR HHR   SP  SPP    QKLKPPP VSH   PS     SLHSS RTRSDRWRF RS      QVS ++GCFPSP
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSP--SPPP---QKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSP

Query:  SPNRKSGKSMNRK-PEPNYTTELETLSRWSVSSRKSISPFRDSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF
         PNRKS K+++RK PEP+Y+++L+TLSRWSVSSRKSISPFR SV SSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  SPNRKSGKSMNRK-PEPNYTTELETLSRWSVSSRKSISPFRDSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF

XP_022131529.1 uncharacterized protein DKFZp434B061-like [Momordica charantia]

5.5e-86

99.4

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSPNRK
        MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQKLKPPPVVSH RRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSPNRK
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSPNRK

Query:  SGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
        SGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  SGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

XP_038899347.1 uncharacterized protein LOC120086669 [Benincasa hispida]

1.2e-53

73.53

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSP--SPPP--QKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPS
        MD DEFYR+PAAVPFKWEIKPGVP+ HHRL  SP  SPP   QKLKPPP VS+   PS     SLHSSSRTRSDRWRF     ++P QVS  +GCFPSP 
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSP--SPPP--QKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPS

Query:  PNRKSGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
        PNRKS KS++R PEP+Y++ LE+LSRWSVSSRKSISPFR SVSSSPSS+SSY SSPRPTSDTEWAGFGLF
Subjt:  PNRKSGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BAM4 uncharacterized protein LOC103487607

5.0e-53

73.99

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSP--SPPP---QKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSP
        MD DEFYR+PAAVPFKWEIKPGVPR HHR   SP  SPP    QKLKPPP VSH   PS     SLHSS RTRSDRWRF RS      QVS ++GCFPSP
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSP--SPPP---QKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSP

Query:  SPNRKSGKSMNRK-PEPNYTTELETLSRWSVSSRKSISPFRDSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF
         PNRKS K+++RK PEP+Y+++L+TLSRWSVSSRKSISPFR SV SSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  SPNRKSGKSMNRK-PEPNYTTELETLSRWSVSSRKSISPFRDSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF

A0A6J1BQH3 uncharacterized protein DKFZp434B061-like

2.6e-86

99.4

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSPNRK
        MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQKLKPPPVVSH RRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSPNRK
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSPNRK

Query:  SGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
        SGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  SGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

A0A6J1FHC7 uncharacterized protein LOC111445775

2.9e-48

68.05

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQ---KLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSP
        MD DEFYR+PAAVPFKWEIKPGVPR HHRL   P+  PQ   KLKPPP V+ ++    S+S       RTRSDRW   +S LAEP QVS   GCF SP P
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQ---KLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSP

Query:  NRKSGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
        NRK+ K +NRKPEP+Y +ELETL RWSVSS+KSISPFR+SVSS  SS SSYQSSPRPTSD+EWAGFGLF
Subjt:  NRKSGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

A0A6J1ISY3 uncharacterized protein LOC111480325

6.4e-48

67.25

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQ---KLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSP
        MD DEFYR+PAAVPFKWEIKPGVPR HH L P P+  PQ   KLKPPP V+ ++    S+S       RTRSDRW  ++S LAEP QVS   GCF SP P
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQ---KLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSP

Query:  NRKSGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSS--SPSSFSSYQSSPRPTSDTEWAGFGLF
        NRK+ K +NRKPEP+  +ELETL RWS+SS+KSISPFR+SVSS  SPSS SSYQSSPRPTSD+EWAGFGLF
Subjt:  NRKSGKSMNRKPEPNYTTELETLSRWSVSSRKSISPFRDSVSS--SPSSFSSYQSSPRPTSDTEWAGFGLF

A0A7N2MK80 Uncharacterized protein

2.3e-34

51.27

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRA-----------------------HHRLCPSPSPP---PQKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRF
        M  DE   +P A+PFKWEIKPGVP+                        H ++ P P+PP   PQKL+PPP  SH   P E  + S  SS RTRS+RWRF
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRA-----------------------HHRLCPSPSPP---PQKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRF

Query:  AR-SSLAEPPQVSPATGCFPSPSPNRKSGKSMNRKP----EPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
         R +S   P  V+P  GCF S    RKS K+  +KP    EP+Y+++LE LSRWSVSSR+S+SPFR+S  S  SSFSSYQSSPRP SD EWAGFGLF
Subjt:  AR-SSLAEPPQVSPATGCFPSPSPNRKSGKSMNRKP----EPNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G21695.1 hydroxyproline-rich glycoprotein family protein

1.6e-06

32.23

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRAH-----HRLCPSPSP---PPQKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQV---SPA-
        +D D+ ++RP AVPFKWEI+PGVP+         L   P P   PP KLK  P    S  PS SSS S  S SR+R        S  A PP     SP+ 
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRAH-----HRLCPSPSP---PPQKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQV---SPA-

Query:  --TGCFPSPSP-----NRKSGKSMNR----------------------KPEPNYTT-------ELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSP
          + C  SP+P     + ++G S+ R                      + EP+ TT       E  T    S       SP     SS  SSFSS + SP
Subjt:  --TGCFPSPSP-----NRKSGKSMNR----------------------KPEPNYTT-------ELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSP

Query:  RPTSDTEWAGF
           +D++ + +
Subjt:  RPTSDTEWAGF

AT1G77400.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789)

6.3e-16

34.05

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Query:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSP--PPQKLKP-------------PPVVS--------------------HS-----------RRPS
        +D D+ ++RP  +PF WEI+PGVP+       + +P  PP+KL P             PP +S                    HS           R PS
Subjt:  MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSP--PPQKLKP-------------PPVVS--------------------HS-----------RRPS

Query:  E-----SSSCSLHSSSRTRSDRWRFARSSLAEP---PQVS-----PATGCFPSPS---PNRKSG----KSMNRKPEPNYTTELETLSRWSVSSRKSISPF
              S   S  SS R  S+RW+  R +   P   P+ S        GCFPSP       KSG    KS +R     Y +++ET+S W+VSSR+S+SP 
Subjt:  E-----SSSCSLHSSSRTRSDRWRFARSSLAEP---PQVS-----PATGCFPSPS---PNRKSG----KSMNRKPEPNYTTELETLSRWSVSSRKSISPF

Query:  RDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
             S  SSFSS + SPR  ++ EW GFGLF
Subjt:  RDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

Sequences

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CDS sequence

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ATGGATGCCGACGAATTTTACCGGCGACCGGCTGCTGTTCCCTTCAAATGGGAGATCAAACCCGGCGTCCCCAGGGCTCACCACCGGCTCTGCCCGTCCCCAAGTCCGCC
GCCACAAAAGTTGAAACCTCCTCCCGTTGTATCCCACTCCCGCCGTCCTTCCGAATCCTCCTCCTGCTCCCTCCACTCGTCCTCGCGAACCCGGTCTGATCGCTGGCGGT
TCGCTCGGTCCAGTCTCGCCGAACCTCCGCAGGTCTCGCCTGCAACTGGATGCTTCCCCTCGCCTTCGCCGAACCGGAAATCGGGCAAGAGTATGAACCGGAAACCCGAA
CCGAATTATACCACTGAATTGGAGACTTTGTCCCGGTGGTCCGTTTCCAGCAGGAAGTCGATTTCGCCGTTCAGAGATTCGGTTTCGTCGTCCCCTTCGTCGTTCTCGTC
GTACCAGTCTTCGCCCCGCCCAACGAGTGATACTGAGTGGGCCGGATTTGGGCTCTTT

mRNA sequence

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Protein sequence

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MDADEFYRRPAAVPFKWEIKPGVPRAHHRLCPSPSPPPQKLKPPPVVSHSRRPSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPSPNRKSGKSMNRKPE
PNYTTELETLSRWSVSSRKSISPFRDSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

MS004569 (gene) of Bitter gourd (TR) v1 genome