; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004576 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004576
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionplastid transcriptionally active 6
Genome locationscaffold995:440964..443119
RNA-Seq ExpressionMS004576
SyntenyMS004576
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052214.1 uncharacterized protein E6C27_scaffold207G00250 [Cucumis melo var. makuwa]3.0e-17693.47Show/hide
Query:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP  I++LRA SISA +S+ HLPSLPYRKSTPSA+ LF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        A AAA SD VGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        ERDDPTTVIEKEEWTKTR DMERHLRKLRDFS S  F
Subjt:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.0e-17593.49Show/hide
Query:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSP PPA IH+LR PSISA SS+ HLPSLPYRKSTPSA+ LFVPRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LAAA
Subjt:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AVAAAS-SDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        A AAA+ S+ VGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AVAAAS-SDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        SERDDPTTVIEKEEWTKTR DMERHLRKLRDFS S WF
Subjt:  SERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]9.4e-17893.77Show/hide
Query:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP  I++LRA SISA +S+ HLPSLPYRKSTPSA+ LF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        A AAA SD VGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        ERDDPTTVIEKEEWTKTR DMERHLRKLRDFS S WF
Subjt:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

XP_031740569.1 uncharacterized protein LOC101213327 [Cucumis sativus]3.4e-17592.28Show/hide
Query:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSP PP  I++LR  SIS+ +S+ HLPSLPY K+TP A+ LF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        A AAA SD VGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        ERDDPTTVIEKEEWTKTR DMERHLRKLRDFS S WF
Subjt:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

XP_038896770.1 uncharacterized protein LOC120085024 [Benincasa hispida]8.0e-17793.77Show/hide
Query:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTV L+SSP  PA I++LRA SISA SS+ HLPSLPYRKSTPS + LF PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        A AAA SD VGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        ERDDPTTVIEKEEWTKTR DMERHLRKLRDFS S WF
Subjt:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876134.6e-17893.77Show/hide
Query:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP  I++LRA SISA +S+ HLPSLPYRKSTPSA+ LF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        A AAA SD VGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        ERDDPTTVIEKEEWTKTR DMERHLRKLRDFS S WF
Subjt:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

A0A5A7UA32 Uncharacterized protein1.5e-17693.47Show/hide
Query:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP  I++LRA SISA +S+ HLPSLPYRKSTPSA+ LF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        A AAA SD VGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        ERDDPTTVIEKEEWTKTR DMERHLRKLRDFS S  F
Subjt:  ERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

A0A5D2VU32 Uncharacterized protein1.2e-13876.19Show/hide
Query:  STVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSL-PYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAA
        +T+FL    SPP    K  + S+    S+   PSL P    +PS  TL    +  F V  DDGD D+GGPDDYDMD+EE+EE+DNKKDFD+EYDPLAAA+
Subjt:  STVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSL-PYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAA

Query:  VAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQS
         A ASS  + D +I I +SKSFVSTQGWDS+M+VDYRINEEEFHKISL+ CDFFIRKPPDPDNDVYDFREMYV+PPDTDVY+IPKVLAPMPQKYIRCA S
Subjt:  VAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQS

Query:  DYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSE
        DYGCYNVTEPPIDAPRDPLYK+E+EV+KVFLTKH+RNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR+RDR++DLLV+RDNGNSFKIIHSSE
Subjt:  DYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSE

Query:  RDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        RDDPTTVIE+EEW KTR DMERHLRKLRDFS S WF
Subjt:  RDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

A0A6J1F6A7 uncharacterized protein LOC1114425722.3e-17492.65Show/hide
Query:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSP PPA IH+LR PSISA SS+ HLPSL YRKSTPSA+ LFVPRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LAAA
Subjt:  MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AVAAAS---SDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        A AAA+   S+ VGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AVAAAS---SDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII
        CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKII
Subjt:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII

Query:  HSSERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        HSSERDDPTTVIEKEEWTKTR DMERHLRKLRDFS S WF
Subjt:  HSSERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

A0A6J1IGR4 uncharacterized protein LOC1114770765.2e-17492.4Show/hide
Query:  MNSTVFLLSS--PSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLA
        MNSTVFLLSS  P PPA IH+LR PSISA SS+ HLPSLPYRKSTPSA+ LFVPRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LA
Subjt:  MNSTVFLLSS--PSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLA

Query:  AAAVAAAS---SDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
        AAA AAA+   S+ VGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
Subjt:  AAAVAAAS---SDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY

Query:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK
        IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFK
Subjt:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK

Query:  IIHSSERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        IIHSSERDDPTTVIEKEEWTKTR DMERHLRKLRDFS S WF
Subjt:  IIHSSERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic2.4e-13181.52Show/hide
Query:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD
        DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA  AA      GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPD
Subjt:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD

Query:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK
        PDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTK
Subjt:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK

Query:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        SITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTKTR DME+HLRKLRDFS S WF
Subjt:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 61.7e-13281.52Show/hide
Query:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD
        DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA  AA      GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPD
Subjt:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD

Query:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK
        PDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTK
Subjt:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK

Query:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        SITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTKTR DME+HLRKLRDFS S WF
Subjt:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF

AT1G21600.2 plastid transcriptionally active 61.7e-13281.52Show/hide
Query:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD
        DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA  AA      GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPD
Subjt:  DDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAVAAASSDAVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPD

Query:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK
        PDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTK
Subjt:  PDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTK

Query:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF
        SITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTKTR DME+HLRKLRDFS S WF
Subjt:  SITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRLDMERHLRKLRDFSTSYWF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCTACCGTCTTCCTCCTCTCCTCGCCGTCGCCGCCGGCCATAATCCACAAGCTCCGAGCCCCCTCCATCTCAGCCGGAAGCTCTATTTCCCATCTCCCAAGCTT
GCCCTATCGGAAATCGACTCCCTCCGCGACCACTCTCTTCGTCCCTAGAAGAAATCCTTTCCGAGTATTCTCCGACGACGGAGATGGCGATAGCGGCGGCCCCGATGACT
ACGACATGGACGACGAGGAAATGGAGGAAGTCGACAACAAAAAGGACTTCGACATTGAGTACGATCCTCTAGCCGCGGCCGCGGTCGCGGCGGCGAGTTCTGACGCTGTC
GGTGACGAGAATATTTCGATTGTGCAGAGCAAAAGTTTTGTGTCCACACAGGGGTGGGATTCGGAGATGATTGTGGATTACAGGATAAATGAGGAGGAGTTTCATAAGAT
TAGCTTGTTGCACTGTGATTTCTTCATCAGGAAGCCGCCGGATCCAGACAACGATGTCTATGATTTCAGAGAGATGTATGTTACTCCTCCAGACACTGATGTTTATGCCA
TCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTCGGGATCCATTA
TATAAGTCTGAGAAGGAGGTTCTTAAGGTTTTCTTGACGAAGCACTTCAGAAACCGAAGGCTGCGTGATCCAGAATTTGTCCTAGATTTTGAGGAAATATATGTAATTGA
TTCAAAAACCAAGTCAATCACCAGGGCAAAAGTCTTGGTTACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGTGACTTACTTGTAGTTCGCGATAATGGGAACTCGT
TCAAGATCATTCATTCGAGCGAACGAGATGATCCAACCACAGTGATAGAGAAGGAGGAGTGGACCAAAACTAGACTAGATATGGAGAGACATCTTAGGAAGCTAAGGGAT
TTCAGCACTTCATATTGGTTT
mRNA sequenceShow/hide mRNA sequence
ATGAACTCTACCGTCTTCCTCCTCTCCTCGCCGTCGCCGCCGGCCATAATCCACAAGCTCCGAGCCCCCTCCATCTCAGCCGGAAGCTCTATTTCCCATCTCCCAAGCTT
GCCCTATCGGAAATCGACTCCCTCCGCGACCACTCTCTTCGTCCCTAGAAGAAATCCTTTCCGAGTATTCTCCGACGACGGAGATGGCGATAGCGGCGGCCCCGATGACT
ACGACATGGACGACGAGGAAATGGAGGAAGTCGACAACAAAAAGGACTTCGACATTGAGTACGATCCTCTAGCCGCGGCCGCGGTCGCGGCGGCGAGTTCTGACGCTGTC
GGTGACGAGAATATTTCGATTGTGCAGAGCAAAAGTTTTGTGTCCACACAGGGGTGGGATTCGGAGATGATTGTGGATTACAGGATAAATGAGGAGGAGTTTCATAAGAT
TAGCTTGTTGCACTGTGATTTCTTCATCAGGAAGCCGCCGGATCCAGACAACGATGTCTATGATTTCAGAGAGATGTATGTTACTCCTCCAGACACTGATGTTTATGCCA
TCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTCGGGATCCATTA
TATAAGTCTGAGAAGGAGGTTCTTAAGGTTTTCTTGACGAAGCACTTCAGAAACCGAAGGCTGCGTGATCCAGAATTTGTCCTAGATTTTGAGGAAATATATGTAATTGA
TTCAAAAACCAAGTCAATCACCAGGGCAAAAGTCTTGGTTACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGTGACTTACTTGTAGTTCGCGATAATGGGAACTCGT
TCAAGATCATTCATTCGAGCGAACGAGATGATCCAACCACAGTGATAGAGAAGGAGGAGTGGACCAAAACTAGACTAGATATGGAGAGACATCTTAGGAAGCTAAGGGAT
TTCAGCACTTCATATTGGTTT
Protein sequenceShow/hide protein sequence
MNSTVFLLSSPSPPAIIHKLRAPSISAGSSISHLPSLPYRKSTPSATTLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAVAAASSDAV
GDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPL
YKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRLDMERHLRKLRD
FSTSYWF