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MS004591 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004591
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein .
Genome locationscaffold995:528589..528885
RNA-Seq ExpressionMS004591
SyntenyMS004591
Gene Ontology termsGO:0048364 - root development (biological process)
GO:0050789 - regulation of biological process (biological process)
InterPro domainsIPR033250 - C-terminally encoded peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC31035.1 hypothetical protein L484_021337 [Morus notabilis]4.6e-0843.16Show/hide
Query:  ACRSLNLSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPP
        A R+  LS Y+ + L++  + F S +SRPLH +H PV         S        +P  P++  FS+N YK  E +AFRPT+PGHSPGVGH  PP
Subjt:  ACRSLNLSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPP

KAF5725791.1 hypothetical protein HS088_TW23G00520 [Tripterygium wilfordii]2.7e-0844.23Show/hide
Query:  MACRSLNLSFYVFITLIILLLRFISITSRPLH-----DIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEP
        MA +S  L FYV + L+     F++   RPL+      +H P      ++ SS        RPP+       INRYK+ E EAFRPTSPGHSPGVGHKEP
Subjt:  MACRSLNLSFYVFITLIILLLRFISITSRPLH-----DIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEP

Query:  PGSP
        P +P
Subjt:  PGSP

KAG6591857.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1559.18Show/hide
Query:  MACRSLNLSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPAS-LAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPG
        MA R  +L F   + LI LLL  +S+TSRPLH I  P+ +  A+AV S       I PPAP S LAFSINRYKYVE +AFRPT+PGHSPGVGH +PPG
Subjt:  MACRSLNLSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPAS-LAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPG

KAG6608019.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1658.24Show/hide
Query:  LSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPGS
        L  +  + L++ LL F+S+TSRP HDI+ P +      V  F  R A I PPA  S  FSINRYKYVEM+AFRPTSPGHSPGVGHK+PPG+
Subjt:  LSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPGS

OAY29952.1 hypothetical protein MANES_15G184800v8 [Manihot esculenta]7.2e-0946.51Show/hide
Query:  ITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPGSP
        + L+ L +      SR LH IH P           F  + +   P  P+ + + INRYKY E EAFRPTSPGHSPGVGHK+PPG+P
Subjt:  ITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPGSP

TrEMBL top hitse value%identityAlignment
A0A0A0KWX0 Uncharacterized protein2.1e-1454.29Show/hide
Query:  MACRSLNL-SFYVFITLIILLLRFISI---TSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASL--AFSINRYKYVEMEAFRPTSPGHSPGVGHKE
        MA RSL+L SF+  + L++LLL   S+   +SRPLH IH                    I PPAP SL  +FSINRYKYVE +AFRPTSPGHSPGVGH E
Subjt:  MACRSLNL-SFYVFITLIILLLRFISI---TSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASL--AFSINRYKYVEMEAFRPTSPGHSPGVGHKE

Query:  PPGSP
        PPG P
Subjt:  PPGSP

A0A2C9UJ23 Uncharacterized protein3.5e-0946.51Show/hide
Query:  ITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPGSP
        + L+ L +      SR LH IH P           F  + +   P  P+ + + INRYKY E EAFRPTSPGHSPGVGHK+PPG+P
Subjt:  ITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPGSP

A0A7J7BV90 Uncharacterized protein1.3e-0844.23Show/hide
Query:  MACRSLNLSFYVFITLIILLLRFISITSRPLH-----DIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEP
        MA +S  L FYV + L+     F++   RPL+      +H P      ++ SS        RPP+       INRYK+ E EAFRPTSPGHSPGVGHKEP
Subjt:  MACRSLNLSFYVFITLIILLLRFISITSRPLH-----DIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEP

Query:  PGSP
        P +P
Subjt:  PGSP

A0A7N2N0V5 Uncharacterized protein1.3e-0843.43Show/hide
Query:  MACRSLNLSFYVFITLIILLLRFISI-TSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPGS
        MA R+  L+F   + +++L   F SI  SRP   IH P +  + ++            P AP +++F+INRYK VE EAFRPT+PGHSPGVGH  PP +
Subjt:  MACRSLNLSFYVFITLIILLLRFISI-TSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPGS

W9S854 Uncharacterized protein2.3e-0843.16Show/hide
Query:  ACRSLNLSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPP
        A R+  LS Y+ + L++  + F S +SRPLH +H PV         S        +P  P++  FS+N YK  E +AFRPT+PGHSPGVGH  PP
Subjt:  ACRSLNLSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPP

SwissProt top hitse value%identityAlignment
P0DN99 Precursor of CEP123.8e-0554.76Show/hide
Query:  PPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPGSP
        PP      F IN YK +E  AFRPT  G S G+GHK+PPG+P
Subjt:  PPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPGSP

Q3EBM6 Precursor of CEP44.2e-0433.33Show/hide
Query:  SLNLSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAF----SINRYKYVEMEAFRPTSPGHSPGVGHKEPPGSP
        S+ + F   I L+++ + F +  +      H PVV+ +               PP P    F     INR+K +E +AFRPT  G S G+GHK PPG+P
Subjt:  SLNLSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAF----SINRYKYVEMEAFRPTSPGHSPGVGHKEPPGSP

Arabidopsis top hitse value%identityAlignment
AT1G31670.1 Copper amine oxidase family protein5.1e-0553.85Show/hide
Query:  PPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPP
        PP      F IN YK +E  AFRPT  G S G+GHK+PP
Subjt:  PPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPP

AT2G35612.1 FUNCTIONS IN: molecular_function unknown3.0e-0533.33Show/hide
Query:  SLNLSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAF----SINRYKYVEMEAFRPTSPGHSPGVGHKEPPGSP
        S+ + F   I L+++ + F +  +      H PVV+ +               PP P    F     INR+K +E +AFRPT  G S G+GHK PPG+P
Subjt:  SLNLSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAF----SINRYKYVEMEAFRPTSPGHSPGVGHKEPPGSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTAGAAGCTTAAACTTGAGCTTTTATGTCTTTATCACTCTCATCATTCTTCTTCTTCGTTTCATTTCTATAACGTCACGGCCGCTACATGACATTCATCGGCC
CGTAGTAGCGACGACCGCAATTGCGGTAAGCTCTTTTGACAAACGTCGTGCAAGAATACGGCCTCCTGCTCCAGCATCTTTGGCCTTCTCCATAAACCGATATAAATATG
TTGAGATGGAAGCTTTTCGACCGACTTCGCCAGGGCACAGCCCTGGAGTCGGCCATAAGGAACCGCCAGGTTCGCCG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTAGAAGCTTAAACTTGAGCTTTTATGTCTTTATCACTCTCATCATTCTTCTTCTTCGTTTCATTTCTATAACGTCACGGCCGCTACATGACATTCATCGGCC
CGTAGTAGCGACGACCGCAATTGCGGTAAGCTCTTTTGACAAACGTCGTGCAAGAATACGGCCTCCTGCTCCAGCATCTTTGGCCTTCTCCATAAACCGATATAAATATG
TTGAGATGGAAGCTTTTCGACCGACTTCGCCAGGGCACAGCCCTGGAGTCGGCCATAAGGAACCGCCAGGTTCGCCG
Protein sequenceShow/hide protein sequence
MACRSLNLSFYVFITLIILLLRFISITSRPLHDIHRPVVATTAIAVSSFDKRRARIRPPAPASLAFSINRYKYVEMEAFRPTSPGHSPGVGHKEPPGSP