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MS004592 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004592
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein S12, mitochondrial
Genome locationscaffold995:530570..530674
RNA-Seq ExpressionMS004592
SyntenyMS004592
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
P28520 Ribosomal protein S12, mitochondrial5.7e-0454.55Show/hide
Query:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRH          HN  EH +VL+ GGRVKDS  V
Subjt:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKDSRAV
P60099 Ribosomal protein S12, mitochondrial7.4e-0457.5Show/hide
Query:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKD
        RKI KVRL+NRH          HNL EH +VL+ GGRVKD
Subjt:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKD
P68535 Ribosomal protein S12, mitochondrial1.5e-0459.09Show/hide
Query:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRH          HNL EH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKDSRAV
P68536 Ribosomal protein S12, mitochondrial1.5e-0459.09Show/hide
Query:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRH          HNL EH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKDSRAV
Q96033 Ribosomal protein S12, mitochondrial5.7e-0460Show/hide
Query:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKD
        RKI KVRL+NRH          HNL EH +VLI GGRVKD
Subjt:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKD
Arabidopsis top hitse value%identityAlignment
AT2G07675.1 Ribosomal protein S12/S23 family protein6.9e-0556.82Show/hide
Query:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRH          HN  EH  VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKDSRAV
ATMG00980.1 Ribosomal protein S12/S23 family protein6.9e-0556.82Show/hide
Query:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRH          HN  EH  VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRH---------YHNLHEHYVVLIGGGRVKDSRAV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTAAGATAGTTAAAGTACGGTTGAACAATCGACATTATCATAATTTGCACGAGCATTATGTGGTGTTAATAGGAGGAGGTAGAGTGAAAGATTCGCGAGCTGTA
mRNA sequenceShow/hide mRNA sequence
CGTAAGATAGTTAAAGTACGGTTGAACAATCGACATTATCATAATTTGCACGAGCATTATGTGGTGTTAATAGGAGGAGGTAGAGTGAAAGATTCGCGAGCTGTA
Protein sequenceShow/hide protein sequence
RKIVKVRLNNRHYHNLHEHYVVLIGGGRVKDSRAV