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MS004599 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004599
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAt4g19430
Genome locationscaffold995:590738..591031
RNA-Seq ExpressionMS004599
SyntenyMS004599
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052276.1 hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa]6.0e-2460.58Show/hide
Query:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSM
        +RER+G+ +Y+E+   +E GD KG +RR+RRKK QFG    V  +N WYF STISHILRKAKAFYNECCCDAYED ++ +   +DPYFSMP LP T  +M
Subjt:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSM

Query:  ANCM
        ANC+
Subjt:  ANCM

KAG6608012.1 hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2460.71Show/hide
Query:  ERERSGHCAYRE----MVSELGDGKGKRR-----KRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKI--VEVTLVDPYFSMPA
        ERER+GH +  +       + GDGKG+RR     +RRK TQFGA   V Q N+WYF STIS+ILRKAKAFYNECCCDAYED ++  VEV +VDPYFSMP 
Subjt:  ERERSGHCAYRE----MVSELGDGKGKRR-----KRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKI--VEVTLVDPYFSMPA

Query:  LPCTSYSMANCM
         P T  +MANCM
Subjt:  LPCTSYSMANCM

KGN55571.1 hypothetical protein Csa_012627 [Cucumis sativus]3.0e-2359.43Show/hide
Query:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIV--EVTLVDPYFSMPALPCTSY
        +RE +G+ +Y+++    E G+ KG +RRKRRKK QFG    V  +N WYF STISHILRKAKAFYNECCCDA+ED ++   EV  +DPYFSMP LP T  
Subjt:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIV--EVTLVDPYFSMPALPCTSY

Query:  SMANCM
        +MANCM
Subjt:  SMANCM

TYK01842.1 hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa]6.0e-2460.58Show/hide
Query:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSM
        +RER+G+ +Y+E+   +E GD KG +RR+RRKK QFG    V  +N WYF STISHILRKAKAFYNECCCDAYED ++ +   +DPYFSMP LP T  +M
Subjt:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSM

Query:  ANCM
        ANC+
Subjt:  ANCM

XP_022940822.1 uncharacterized protein LOC111446301 [Cucurbita moschata]1.2e-2460.71Show/hide
Query:  ERERSGHCAYRE----MVSELGDGKGKRR-----KRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKI--VEVTLVDPYFSMPA
        ERER+GH +  +       + GDGKG+RR     +RRK TQFGA   V Q N+WYF STIS+ILRKAKAFYNECCCDAYED ++  VEV +VDPYFSMP 
Subjt:  ERERSGHCAYRE----MVSELGDGKGKRR-----KRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKI--VEVTLVDPYFSMPA

Query:  LPCTSYSMANCM
         P T  +MANCM
Subjt:  LPCTSYSMANCM

TrEMBL top hitse value%identityAlignment
A0A0A0L609 Uncharacterized protein1.4e-2359.43Show/hide
Query:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIV--EVTLVDPYFSMPALPCTSY
        +RE +G+ +Y+++    E G+ KG +RRKRRKK QFG    V  +N WYF STISHILRKAKAFYNECCCDA+ED ++   EV  +DPYFSMP LP T  
Subjt:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIV--EVTLVDPYFSMPALPCTSY

Query:  SMANCM
        +MANCM
Subjt:  SMANCM

A0A1Q3D8H6 Uncharacterized protein (Fragment)3.7e-1155.71Show/hide
Query:  KRRKRRKKTQFGAVF--QLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIV--EVTLVDPYFSMPALP
        K   R+KK    A+   +L +WY  S+IS+ILRKAKAFYNECCCDA+ED  ++  +VTLVD YFS P +P
Subjt:  KRRKRRKKTQFGAVF--QLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIV--EVTLVDPYFSMPALP

A0A5A7UDK1 Uncharacterized protein2.9e-2460.58Show/hide
Query:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSM
        +RER+G+ +Y+E+   +E GD KG +RR+RRKK QFG    V  +N WYF STISHILRKAKAFYNECCCDAYED ++ +   +DPYFSMP LP T  +M
Subjt:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSM

Query:  ANCM
        ANC+
Subjt:  ANCM

A0A5D3BSQ8 Uncharacterized protein2.9e-2460.58Show/hide
Query:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSM
        +RER+G+ +Y+E+   +E GD KG +RR+RRKK QFG    V  +N WYF STISHILRKAKAFYNECCCDAYED ++ +   +DPYFSMP LP T  +M
Subjt:  ERERSGHCAYREMV--SELGDGKG-KRRKRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSM

Query:  ANCM
        ANC+
Subjt:  ANCM

A0A6J1FKP2 uncharacterized protein LOC1114463015.8e-2560.71Show/hide
Query:  ERERSGHCAYRE----MVSELGDGKGKRR-----KRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKI--VEVTLVDPYFSMPA
        ERER+GH +  +       + GDGKG+RR     +RRK TQFGA   V Q N+WYF STIS+ILRKAKAFYNECCCDAYED ++  VEV +VDPYFSMP 
Subjt:  ERERSGHCAYRE----MVSELGDGKGKRR-----KRRKKTQFGA---VFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKI--VEVTLVDPYFSMPA

Query:  LPCTSYSMANCM
         P T  +MANCM
Subjt:  LPCTSYSMANCM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19430.1 unknown protein1.4e-1057.45Show/hide
Query:  LWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPAL
        LWY   +ISHILRKA+AFYNE CCD Y +   + V  V+PYFS+P +
Subjt:  LWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAGAGAAAGGAGTGGCCATTGTGCATACAGGGAAATGGTGAGTGAGCTTGGAGATGGCAAAGGAAAAAGAAGAAAAAGAAGAAAGAAGACTCAATTTGGGGCTGTTTT
TCAGTTGAATTTGTGGTACTTTGCTTCAACAATCAGCCATATCTTAAGGAAGGCCAAAGCCTTCTACAATGAGTGTTGCTGTGATGCCTATGAGGATGGGAAGATTGTTG
AAGTTACTTTGGTTGATCCTTATTTCTCAATGCCTGCTTTGCCTTGTACTTCTTATTCTATGGCTAATTGTATG
mRNA sequenceShow/hide mRNA sequence
GAGAGAGAAAGGAGTGGCCATTGTGCATACAGGGAAATGGTGAGTGAGCTTGGAGATGGCAAAGGAAAAAGAAGAAAAAGAAGAAAGAAGACTCAATTTGGGGCTGTTTT
TCAGTTGAATTTGTGGTACTTTGCTTCAACAATCAGCCATATCTTAAGGAAGGCCAAAGCCTTCTACAATGAGTGTTGCTGTGATGCCTATGAGGATGGGAAGATTGTTG
AAGTTACTTTGGTTGATCCTTATTTCTCAATGCCTGCTTTGCCTTGTACTTCTTATTCTATGGCTAATTGTATG
Protein sequenceShow/hide protein sequence
ERERSGHCAYREMVSELGDGKGKRRKRRKKTQFGAVFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSMANCM